BLASTX nr result

ID: Atractylodes21_contig00004806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00004806
         (3249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534311.1| succinate dehydrogenase, putative [Ricinus c...    92   1e-15
ref|XP_002264752.2| PREDICTED: succinate dehydrogenase [ubiquino...    90   3e-15
emb|CBI40993.3| unnamed protein product [Vitis vinifera]               90   3e-15
ref|NP_680465.2| succinate dehydrogenase [ubiquinone] iron-sulfu...    87   3e-14
ref|XP_004146922.1| PREDICTED: succinate dehydrogenase [ubiquino...    87   4e-14

>ref|XP_002534311.1| succinate dehydrogenase, putative [Ricinus communis]
           gi|223525519|gb|EEF28073.1| succinate dehydrogenase,
           putative [Ricinus communis]
          Length = 313

 Score = 91.7 bits (226), Expect = 1e-15
 Identities = 42/50 (84%), Positives = 47/50 (94%)
 Frame = -3

Query: 172 LLDALQEIKSEDDSSLSYKRSCRAGICGSCAMNIDGTNTVACLKPIDTYT 23
           +LDALQ+IK+EDDSSLSY+RSCR GICGSC+MNIDGTNTVACLKPID  T
Sbjct: 97  VLDALQKIKAEDDSSLSYRRSCREGICGSCSMNIDGTNTVACLKPIDADT 146


>ref|XP_002264752.2| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           3, mitochondrial-like [Vitis vinifera]
          Length = 303

 Score = 90.1 bits (222), Expect = 3e-15
 Identities = 41/50 (82%), Positives = 47/50 (94%)
 Frame = -3

Query: 172 LLDALQEIKSEDDSSLSYKRSCRAGICGSCAMNIDGTNTVACLKPIDTYT 23
           +LDALQ+IK+E+DSSLSY+RSCR GICGSCAMNIDGTNTVACL+PID  T
Sbjct: 91  VLDALQKIKAEEDSSLSYRRSCREGICGSCAMNIDGTNTVACLRPIDADT 140


>emb|CBI40993.3| unnamed protein product [Vitis vinifera]
          Length = 158

 Score = 90.1 bits (222), Expect = 3e-15
 Identities = 41/50 (82%), Positives = 47/50 (94%)
 Frame = -3

Query: 172 LLDALQEIKSEDDSSLSYKRSCRAGICGSCAMNIDGTNTVACLKPIDTYT 23
           +LDALQ+IK+E+DSSLSY+RSCR GICGSCAMNIDGTNTVACL+PID  T
Sbjct: 91  VLDALQKIKAEEDSSLSYRRSCREGICGSCAMNIDGTNTVACLRPIDADT 140


>ref|NP_680465.2| succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3
           [Arabidopsis thaliana]
           gi|75262571|sp|Q9FJP9.1|DHSB3_ARATH RecName:
           Full=Succinate dehydrogenase [ubiquinone] iron-sulfur
           subunit 3, mitochondrial; AltName: Full=Iron-sulfur
           subunit of complex II; Short=Ip; Flags: Precursor
           gi|10178178|dbj|BAB11652.1| succinate dehydrogenase
           iron-sulfur protein-like [Arabidopsis thaliana]
           gi|12049602|emb|CAC19857.1| mitochondrial succinate
           dehydrogenase iron-sulphur subunit [Arabidopsis
           thaliana] gi|332010628|gb|AED98011.1| succinate
           dehydrogenase [ubiquinone] iron-sulfur subunit 3
           [Arabidopsis thaliana]
          Length = 309

 Score = 87.0 bits (214), Expect = 3e-14
 Identities = 39/50 (78%), Positives = 46/50 (92%)
 Frame = -3

Query: 172 LLDALQEIKSEDDSSLSYKRSCRAGICGSCAMNIDGTNTVACLKPIDTYT 23
           +LD LQ+IK+EDD+SLSY+RSCR GICGSC+MNIDGTNTVACLKPI+  T
Sbjct: 99  VLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNT 148


>ref|XP_004146922.1| PREDICTED: succinate dehydrogenase [ubiquinone] iron-sulfur subunit
           3, mitochondrial-like [Cucumis sativus]
           gi|449522744|ref|XP_004168386.1| PREDICTED: succinate
           dehydrogenase [ubiquinone] iron-sulfur subunit 3,
           mitochondrial-like [Cucumis sativus]
          Length = 293

 Score = 86.7 bits (213), Expect = 4e-14
 Identities = 40/50 (80%), Positives = 44/50 (88%)
 Frame = -3

Query: 172 LLDALQEIKSEDDSSLSYKRSCRAGICGSCAMNIDGTNTVACLKPIDTYT 23
           +LDALQ+IK+E DSSLSY+RSCR GICGSC MNIDG NTVACLKPID  T
Sbjct: 84  VLDALQKIKAEKDSSLSYRRSCREGICGSCGMNIDGANTVACLKPIDADT 133


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