BLASTX nr result

ID: Atractylodes21_contig00003918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003918
         (883 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PAR...   286   6e-75
emb|CBI35579.3| unnamed protein product [Vitis vinifera]              286   6e-75
ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PAR...   278   1e-72
ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi...   276   6e-72
ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|2...   267   3e-69

>ref|XP_003634836.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Vitis vinifera]
          Length = 515

 Score =  286 bits (731), Expect = 6e-75
 Identities = 160/296 (54%), Positives = 201/296 (67%), Gaps = 12/296 (4%)
 Frame = -3

Query: 881  LNDFTFIHSKFLAPLPPTMDEFRSSLLSAFPNILDVNHLMKEIGPLNEYSNLPAAISYLK 702
            LN+F FIHSKFL+PLPP MDEF  SL   FP++LDVNHLMKEIGPL + +NL AA S LK
Sbjct: 224  LNEFAFIHSKFLSPLPPNMDEFMCSLRMVFPHVLDVNHLMKEIGPLKKVTNLSAAASCLK 283

Query: 701  RNFFAPIEIEIPQKASMEESKNHGHNVVRISELFAKLCFILKITPE-TEHHNPDGPSTLK 525
            R FF PI++EIP +AS  E K HGHNV++IS L A LC ILKITPE  +       S L+
Sbjct: 284  RRFFVPIDMEIPHQAS-NEDKIHGHNVLKISHLLANLCSILKITPEMIQSDGGHLASALE 342

Query: 524  RYSNVFNLGSNSFQDSNEGDDISVWTHNPRKISIDNLVFLWGFRSGISAGNLKNLLCKSH 345
             Y+N+F+  S + +D  +G  I VWT + RK+S + LVF+WGFR  +SAG LK LL  SH
Sbjct: 343  GYANIFHPHSTNTEDPIDG-GIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGLKRLLQGSH 401

Query: 344  DALSEDHVFDVRLVDKNCAVVVFWKTGLSEWFLSAIDS---GDDLRELVAEGLMAAGYEA 174
               SE+  FDVR+VD +CA+VVFW++GLS+ FL AI S      LRE+V+EGL AAGYE 
Sbjct: 402  SVFSEE--FDVRMVDGSCAIVVFWQSGLSQTFLEAISSNWISGLLREMVSEGLRAAGYET 459

Query: 173  YKRVCKSEILGADLADS----LAEFDRVSEAHTEES----AEIYWNNELMINFDDL 30
            YK  C+     ADLADS    L E D  SEA +E      ++IYW+ + +IN D+L
Sbjct: 460  YKNACRLGFWEADLADSLDKALEEPDHNSEADSEAKPTGPSQIYWSRDSIINLDEL 515


>emb|CBI35579.3| unnamed protein product [Vitis vinifera]
          Length = 6458

 Score =  286 bits (731), Expect = 6e-75
 Identities = 160/296 (54%), Positives = 201/296 (67%), Gaps = 12/296 (4%)
 Frame = -3

Query: 881  LNDFTFIHSKFLAPLPPTMDEFRSSLLSAFPNILDVNHLMKEIGPLNEYSNLPAAISYLK 702
            LN+F FIHSKFL+PLPP MDEF  SL   FP++LDVNHLMKEIGPL + +NL AA S LK
Sbjct: 6167 LNEFAFIHSKFLSPLPPNMDEFMCSLRMVFPHVLDVNHLMKEIGPLKKVTNLSAAASCLK 6226

Query: 701  RNFFAPIEIEIPQKASMEESKNHGHNVVRISELFAKLCFILKITPE-TEHHNPDGPSTLK 525
            R FF PI++EIP +AS  E K HGHNV++IS L A LC ILKITPE  +       S L+
Sbjct: 6227 RRFFVPIDMEIPHQAS-NEDKIHGHNVLKISHLLANLCSILKITPEMIQSDGGHLASALE 6285

Query: 524  RYSNVFNLGSNSFQDSNEGDDISVWTHNPRKISIDNLVFLWGFRSGISAGNLKNLLCKSH 345
             Y+N+F+  S + +D  +G  I VWT + RK+S + LVF+WGFR  +SAG LK LL  SH
Sbjct: 6286 GYANIFHPHSTNTEDPIDG-GIKVWTDDTRKVSSEGLVFIWGFRGRMSAGGLKRLLQGSH 6344

Query: 344  DALSEDHVFDVRLVDKNCAVVVFWKTGLSEWFLSAIDS---GDDLRELVAEGLMAAGYEA 174
               SE+  FDVR+VD +CA+VVFW++GLS+ FL AI S      LRE+V+EGL AAGYE 
Sbjct: 6345 SVFSEE--FDVRMVDGSCAIVVFWQSGLSQTFLEAISSNWISGLLREMVSEGLRAAGYET 6402

Query: 173  YKRVCKSEILGADLADS----LAEFDRVSEAHTEES----AEIYWNNELMINFDDL 30
            YK  C+     ADLADS    L E D  SEA +E      ++IYW+ + +IN D+L
Sbjct: 6403 YKNACRLGFWEADLADSLDKALEEPDHNSEADSEAKPTGPSQIYWSRDSIINLDEL 6458


>ref|XP_003532241.1| PREDICTED: poly(A)-specific ribonuclease PARN-like [Glycine max]
          Length = 619

 Score =  278 bits (711), Expect = 1e-72
 Identities = 144/293 (49%), Positives = 206/293 (70%), Gaps = 9/293 (3%)
 Frame = -3

Query: 881  LNDFTFIHSKFLAPLPPTMDEFRSSLLSAFPNILDVNHLMKEIGPLNEYSNLPAAISYLK 702
            LND T IHSKF+APLPP +DEF SSL S FP +LD+N+LMK+ G + + +N+P+AISYL 
Sbjct: 329  LNDCTLIHSKFIAPLPPEIDEFVSSLCSVFPEVLDINYLMKKHGTMRKVTNIPSAISYLN 388

Query: 701  RNFFAPIEIEIPQKASMEESKNHGHNVVRISELFAKLCFILKITPE-TEHHNPDGPSTLK 525
             +FFAP+++EIP +A+++E K HG   +R+S LF KLC ILKI+P  TE  N      L+
Sbjct: 389  NHFFAPVDLEIPDQATVKEGKIHGLTALRLSYLFMKLCSILKISPNVTESGNKHLAPELE 448

Query: 524  RYSNVFNLGSNSFQDSNEGDDISVWTHNPRKISIDNLVFLWGFRSGISAGNLKNLLCKSH 345
             ++NVF+  S   QDS  G D+ +WT+N +K+S ++LVFLWGF+ GI+AG LK+LL  SH
Sbjct: 449  DFTNVFHPFSTPIQDSFNGGDVGMWTNNTKKVSCEHLVFLWGFKIGITAGMLKSLLRSSH 508

Query: 344  DALSEDHVFDVRLVDKNCAVVVFWKTGLSEWFLSAIDSGD---DLRELVAEGLMAAGYEA 174
            D  S +  FDV+LVDK+CA+VVFW++G+S+ FL  ++S +   DL+ELV++G+    YE 
Sbjct: 509  DIFSRE--FDVKLVDKSCAIVVFWQSGVSKRFLDILNSEEIRGDLKELVSDGMRVTSYET 566

Query: 173  YKRVCKSEILGADLADSLAEFDRVS----EAHTE-ESAEIYWNNELMINFDDL 30
            Y  +C+  +   DLA+SL      S    E++ E +S+EI+W N+ +IN DDL
Sbjct: 567  YNTICRLGLWEMDLAESLERALESSCCDIESNCERKSSEIHWYNDNVINLDDL 619


>ref|XP_002527264.1| ribonuclease, putative [Ricinus communis] gi|223533357|gb|EEF35108.1|
            ribonuclease, putative [Ricinus communis]
          Length = 624

 Score =  276 bits (705), Expect = 6e-72
 Identities = 146/294 (49%), Positives = 197/294 (67%), Gaps = 10/294 (3%)
 Frame = -3

Query: 881  LNDFTFIHSKFLAPLPPTMDEFRSSLLSAFPNILDVNHLMKEIGPLNEYSNLPAAISYLK 702
            LND  FIHSKFLAPLPP+M+EF  SL   FP ++DVNHLMKEI PL + +N+P A SYLK
Sbjct: 334  LNDLAFIHSKFLAPLPPSMEEFTCSLRLVFPQVIDVNHLMKEISPLKKVTNIPMATSYLK 393

Query: 701  RNFFAPIEIEIPQKASMEESKNHGHNVVRISELFAKLCFILKITPETEHHNPDG-PSTLK 525
              FFAP+++EIP  A + E K HGHNV+RI +LFAKLC+ILK+ P +   N     S ++
Sbjct: 394  NWFFAPVDMEIPFPAMVNEGKIHGHNVMRICQLFAKLCYILKLAPNSIQSNEKNLASAIE 453

Query: 524  RYSNVFNLGSNSFQDSNEGDDISVWTHNPRKISIDNLVFLWGFRSGISAGNLKNLLCKSH 345
             Y N+F+      Q+  + +D+ +WT+N RK+S  +LVFLWGFR  +SAG LK+LL +SH
Sbjct: 454  AYVNIFSPYFPGPQEPTD-EDVRIWTNNTRKVSCQDLVFLWGFRYRMSAGMLKSLLQQSH 512

Query: 344  DALSEDHVFDVRLVDKNCAVVVFWKTGLSEWFLSAIDSGDD----LRELVAEGLMAAGYE 177
               SE+  FDVR VDK+CA+VVFW+ GLS   L  +    +    LRE+V+EG+ AA Y+
Sbjct: 513  KVFSEE--FDVRFVDKSCAIVVFWEPGLSNTLLDVLKGSSEIVGPLREMVSEGVRAASYD 570

Query: 176  AYKRVCKSEILGADLADS----LAEFDRVSEAHT-EESAEIYWNNELMINFDDL 30
             Y RVC+  +   +LADS    LA+ D  S++ +   S+  YW +E MIN D+L
Sbjct: 571  TYNRVCRLGLWHENLADSLDKALADTDHPSDSDSVTSSSNTYWCHEWMINLDEL 624


>ref|XP_002321239.1| predicted protein [Populus trichocarpa] gi|222862012|gb|EEE99554.1|
            predicted protein [Populus trichocarpa]
          Length = 628

 Score =  267 bits (682), Expect = 3e-69
 Identities = 145/293 (49%), Positives = 199/293 (67%), Gaps = 9/293 (3%)
 Frame = -3

Query: 881  LNDFTFIHSKFLAPLPPTMDEFRSSLLSAFPNILDVNHLMKEIGPLNEYSNLPAAISYLK 702
            LND T IHSKF+APLPPT+DEF  SL  AFP ++DVNHLMKEI PL + +++P AIS LK
Sbjct: 340  LNDLTVIHSKFIAPLPPTVDEFMCSLRLAFPLVIDVNHLMKEISPLRKVTSIPVAISQLK 399

Query: 701  RNFFAPIEIEIPQKASMEESKNHGHNVVRISELFAKLCFILKITPETEHHNPD-GPSTLK 525
              FF PI++EIP +A   E   HG NVV+I ELFA+LC ILKI P     + + G S L+
Sbjct: 400  NRFFTPIDMEIPCQAMENEDTIHGQNVVKICELFARLCSILKIDPAAVKSDEEKGASALE 459

Query: 524  RYSNVFNLGSNSFQDSNEGDDISVWTHNPRKISIDNLVFLWGFRSGISAGNLKNLLCKSH 345
             Y+N+F+    + ++  +G +I +WT+N R +S +++VFLWGF   ++AG LK+LL +SH
Sbjct: 460  AYANIFSPFCTASEEPIDG-EIKIWTNNTRTVSCEDMVFLWGFGDRVTAGILKSLLQESH 518

Query: 344  DALSEDHVFDVRLVDKNCAVVVFWKTGLSEWFLSAIDSGDD----LRELVAEGLMAAGYE 177
            +A S++  FDVRLVD +CA+V+FW+ GL+E FL+ ++   D    LRE+V+EGL AAGYE
Sbjct: 519  EAFSKE--FDVRLVDNSCAIVIFWQHGLTETFLNTMNKCSDMRGPLREMVSEGLRAAGYE 576

Query: 176  AYKRVCKSEILGADLADS----LAEFDRVSEAHTEESAEIYWNNELMINFDDL 30
             Y R C+  +  + LADS    LA+ D  SEA ++        NE +IN DDL
Sbjct: 577  TYNRACRLGLWESSLADSLDRALADSDCASEADSKTKCSDRC-NEWIINLDDL 628


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