BLASTX nr result

ID: Atractylodes21_contig00003622 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003622
         (1524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521847.1| Armadillo repeat-containing protein, putativ...   155   4e-39
ref|NP_567943.1| RING/U-box domain-containing protein [Arabidops...   158   3e-36
dbj|BAC43725.1| unknown protein [Arabidopsis thaliana]                158   3e-36
gb|AAM62531.1| unknown [Arabidopsis thaliana]                         158   3e-36
ref|XP_002330318.1| predicted protein [Populus trichocarpa] gi|2...   148   4e-34

>ref|XP_002521847.1| Armadillo repeat-containing protein, putative [Ricinus communis]
           gi|223538885|gb|EEF40483.1| Armadillo repeat-containing
           protein, putative [Ricinus communis]
          Length = 719

 Score =  155 bits (393), Expect(2) = 4e-39
 Identities = 72/137 (52%), Positives = 93/137 (67%), Gaps = 1/137 (0%)
 Frame = -1

Query: 993 ICFENFSIACKTNCGHWFCANCILQFWTYKSVLQKCNCPICARPITKLTPEASLLIMH-E 817
           ICF  F+I CK+ CGHW+C +CILQ+W Y +  + C CP+CA  ITKLTPEASL   H +
Sbjct: 69  ICFGTFTIPCKSICGHWYCGSCILQYWNYSAASKPCKCPMCASRITKLTPEASLYSQHQD 128

Query: 816 VEVVEVLKNVQRYNRLFQGGISGVIQKVFEVPNVFKRMLCGLMDPDRFRGNYYAMRSFAL 637
            +V +VL+NV RYNRLF GG  G++QKV E P   KRM   +MDPDR     + +R FA+
Sbjct: 129 QDVTKVLENVDRYNRLFIGGALGLVQKVRESPLFIKRMFLQMMDPDRPYSYLHEIRLFAM 188

Query: 636 LMSCFYNVSSFEFIPTG 586
           ++S  Y  + F FIPTG
Sbjct: 189 MLSVLYAATPFNFIPTG 205



 Score = 33.9 bits (76), Expect(2) = 4e-39
 Identities = 17/25 (68%), Positives = 20/25 (80%)
 Frame = -3

Query: 478 GTLGVRRLFDLCAIALVVILCLVGI 404
           G LG+ RLFD  AIALV++L LVGI
Sbjct: 205 GGLGIVRLFDYVAIALVLVLRLVGI 229


>ref|NP_567943.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|63003762|gb|AAY25410.1| At4g33940 [Arabidopsis
           thaliana] gi|87116618|gb|ABD19673.1| At4g33940
           [Arabidopsis thaliana] gi|332660897|gb|AEE86297.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 262

 Score =  158 bits (400), Expect = 3e-36
 Identities = 70/136 (51%), Positives = 94/136 (69%)
 Frame = -1

Query: 993 ICFENFSIACKTNCGHWFCANCILQFWTYKSVLQKCNCPICARPITKLTPEASLLIMHEV 814
           ICF +F++ C+ NCGHW+C NCILQ+W Y ++ + C CP+C R ITKL+PE SL    E 
Sbjct: 76  ICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKLSPEPSLQERQEQ 135

Query: 813 EVVEVLKNVQRYNRLFQGGISGVIQKVFEVPNVFKRMLCGLMDPDRFRGNYYAMRSFALL 634
           EV EVL  V+RYNRLF GG++G +QKV E+P + KRM+  +MD D     ++ +R FA+ 
Sbjct: 136 EVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVKRMVWHMMDTDVNNLYFHEVRIFAMF 195

Query: 633 MSCFYNVSSFEFIPTG 586
           MS  Y  + F FIPTG
Sbjct: 196 MSTLYTAAEFNFIPTG 211


>dbj|BAC43725.1| unknown protein [Arabidopsis thaliana]
          Length = 252

 Score =  158 bits (400), Expect = 3e-36
 Identities = 70/136 (51%), Positives = 94/136 (69%)
 Frame = -1

Query: 993 ICFENFSIACKTNCGHWFCANCILQFWTYKSVLQKCNCPICARPITKLTPEASLLIMHEV 814
           ICF +F++ C+ NCGHW+C NCILQ+W Y ++ + C CP+C R ITKL+PE SL    E 
Sbjct: 66  ICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKLSPEPSLQERQEQ 125

Query: 813 EVVEVLKNVQRYNRLFQGGISGVIQKVFEVPNVFKRMLCGLMDPDRFRGNYYAMRSFALL 634
           EV EVL  V+RYNRLF GG++G +QKV E+P + KRM+  +MD D     ++ +R FA+ 
Sbjct: 126 EVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVKRMVWHMMDTDVNNLYFHEVRIFAMF 185

Query: 633 MSCFYNVSSFEFIPTG 586
           MS  Y  + F FIPTG
Sbjct: 186 MSTLYTAAEFNFIPTG 201


>gb|AAM62531.1| unknown [Arabidopsis thaliana]
          Length = 262

 Score =  158 bits (400), Expect = 3e-36
 Identities = 70/136 (51%), Positives = 94/136 (69%)
 Frame = -1

Query: 993 ICFENFSIACKTNCGHWFCANCILQFWTYKSVLQKCNCPICARPITKLTPEASLLIMHEV 814
           ICF +F++ C+ NCGHW+C NCILQ+W Y ++ + C CP+C R ITKL+PE SL    E 
Sbjct: 76  ICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKLSPEPSLQERQEQ 135

Query: 813 EVVEVLKNVQRYNRLFQGGISGVIQKVFEVPNVFKRMLCGLMDPDRFRGNYYAMRSFALL 634
           EV EVL  V+RYNRLF GG++G +QKV E+P + KRM+  +MD D     ++ +R FA+ 
Sbjct: 136 EVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVKRMVWHMMDTDVNNLYFHEVRIFAMF 195

Query: 633 MSCFYNVSSFEFIPTG 586
           MS  Y  + F FIPTG
Sbjct: 196 MSTLYTAAEFNFIPTG 211


>ref|XP_002330318.1| predicted protein [Populus trichocarpa] gi|222871353|gb|EEF08484.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  148 bits (373), Expect(2) = 4e-34
 Identities = 69/138 (50%), Positives = 91/138 (65%), Gaps = 2/138 (1%)
 Frame = -1

Query: 993 ICFENFSIACKTNCGHWFCANCILQFWTYKSVLQKCNCPICARPITKLTPEASLLIMHEV 814
           ICF  F + CK NCGHW+C +CILQ+W Y     +C CP+C+  I+ LTPEASL    E 
Sbjct: 14  ICFGTFDVPCKANCGHWYCGSCILQYWKYSGPSSRCKCPMCSSRISNLTPEASLHGQQEQ 73

Query: 813 EVVEVLKNVQRYNRLFQGGISGVIQKVFEVPNVFKRMLCGLMDPDRFRGNYY--AMRSFA 640
           EVV+VL++V+RYN +F GG+ G+ +KV  VP +FKRML  +MDPD      Y   MR FA
Sbjct: 74  EVVKVLEDVRRYNHVFVGGVRGLARKVHVVPFLFKRMLEEMMDPDGHNFFLYEKLMRMFA 133

Query: 639 LLMSCFYNVSSFEFIPTG 586
           + ++  Y  S F+FIP G
Sbjct: 134 IFLAILYISSPFDFIPLG 151



 Score = 24.6 bits (52), Expect(2) = 4e-34
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 478 GTLGVRRLFDLCAIALVVILCLVGI 404
           G +GV RLF+  ++ L V L L GI
Sbjct: 151 GRIGVVRLFEYMSMLLAVTLRLAGI 175


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