BLASTX nr result

ID: Atractylodes21_contig00003587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003587
         (1115 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA06461.1| TED3 [Zinnia elegans]                                 141   3e-31
ref|XP_002275180.1| PREDICTED: protein E6-like [Vitis vinifera]        84   5e-14
ref|XP_002279294.1| PREDICTED: protein E6 [Vitis vinifera] gi|14...    83   1e-13
ref|XP_002310412.1| predicted protein [Populus trichocarpa] gi|2...    75   2e-11
gb|AFK38307.1| unknown [Lotus japonicus]                               74   5e-11

>dbj|BAA06461.1| TED3 [Zinnia elegans]
          Length = 319

 Score =  141 bits (355), Expect = 3e-31
 Identities = 68/83 (81%), Positives = 73/83 (87%), Gaps = 5/83 (6%)
 Frame = +2

Query: 689 TSSKEENNGYNN--GYMVEQQGLSDTRFMENGKYPYDANNN---HESSYEEEVSENGEGY 853
           TS KEENNGYNN  GYM EQQG+SDTRF+ENGKY YDANNN   HESSYEEEVS+NGEGY
Sbjct: 235 TSPKEENNGYNNNNGYMAEQQGMSDTRFLENGKYSYDANNNGNNHESSYEEEVSDNGEGY 294

Query: 854 YRNNEDSKNEFDTMEEYERQEGY 922
           YRNNE+ K EFDTMEEYE+QEGY
Sbjct: 295 YRNNEEPKYEFDTMEEYEKQEGY 317



 Score = 60.5 bits (145), Expect = 7e-07
 Identities = 33/61 (54%), Positives = 44/61 (72%)
 Frame = +2

Query: 296 KEYGYGLYGQGSSEFSPEAEGYQTSLEDSKNGTPAEETEEDGGPAADKYFTSEKEAPFEK 475
           +E+GYGLYGQGSSEFS E E +++SLE  +N T  +E EE+     +  F+S+KE PFEK
Sbjct: 14  EEHGYGLYGQGSSEFSSE-EYHESSLEGLENETLEDEEEEETNDGDE--FSSQKETPFEK 70

Query: 476 L 478
           L
Sbjct: 71  L 71


>ref|XP_002275180.1| PREDICTED: protein E6-like [Vitis vinifera]
          Length = 282

 Score = 84.3 bits (207), Expect = 5e-14
 Identities = 41/96 (42%), Positives = 58/96 (60%), Gaps = 8/96 (8%)
 Frame = +2

Query: 689 TSSKEENNGY------NNGYMVEQQGLSDTRFMENGKYPYDAN--NNHESSYEEEVSENG 844
           ++S   NNGY      NNGY  E+QG+SDTRF+ENGKY +D N  N++   Y  E     
Sbjct: 187 STSSSHNNGYSTSSSYNNGYSTEKQGMSDTRFLENGKYYHDLNNENHYVDGYNTEKGSTS 246

Query: 845 EGYYRNNEDSKNEFDTMEEYERQEGYPESDDRGYVP 952
             +Y +N ++ NEF++MEEY+RQ+   +     YVP
Sbjct: 247 NEFYYSNTENSNEFNSMEEYQRQQEEYQQGQEEYVP 282



 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 33/96 (34%), Positives = 45/96 (46%), Gaps = 10/96 (10%)
 Frame = +2

Query: 689 TSSKEENNGY------NNGYMVEQQGLSDTRFMENGKYPYDAN----NNHESSYEEEVSE 838
           TS    NN Y      NNG+  EQQG+SDTRF+ENGKY Y  +    N++++ Y      
Sbjct: 114 TSYSNNNNRYSTEYYKNNGHTTEQQGMSDTRFLENGKYSYKPDTYSPNSNKNGYSSSYRN 173

Query: 839 NGEGYYRNNEDSKNEFDTMEEYERQEGYPESDDRGY 946
           NG   Y  +    N + T   +        S + GY
Sbjct: 174 NG---YSTSSSHNNGYSTSSSHNNGYSTSSSYNNGY 206


>ref|XP_002279294.1| PREDICTED: protein E6 [Vitis vinifera] gi|147778580|emb|CAN60306.1|
           hypothetical protein VITISV_005068 [Vitis vinifera]
          Length = 253

 Score = 83.2 bits (204), Expect = 1e-13
 Identities = 46/98 (46%), Positives = 62/98 (63%), Gaps = 11/98 (11%)
 Frame = +2

Query: 692 SSKEENNGYNNGYMVEQQGLSDTRFMENGKYPYDANN--NHESSYEEEVSE------NGE 847
           ++   NN  NNGY  +QQG+SDTRF+ENG+Y YD N+  N+ + YE   +E      N  
Sbjct: 157 NNNNNNNNNNNGYNTKQQGMSDTRFLENGRYYYDLNSEKNYRNEYENSRTEYSRNEYNNR 216

Query: 848 GYYRNNEDSKN--EFD-TMEEYERQEGYPESDDRGYVP 952
           GYY NN +++N  EFD +ME Y+ QE Y ES D  +VP
Sbjct: 217 GYYGNNNNNENSYEFDNSMEGYQNQEQYQESQDE-FVP 253


>ref|XP_002310412.1| predicted protein [Populus trichocarpa] gi|222853315|gb|EEE90862.1|
           predicted protein [Populus trichocarpa]
          Length = 450

 Score = 75.5 bits (184), Expect = 2e-11
 Identities = 40/85 (47%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
 Frame = +2

Query: 695 SKEENNGYNNGYMVEQQGLSDTRFMENGKYPYDANNNH---ESSYEE-EVSENGEGYYRN 862
           ++  +NGY   Y  E+QG+SDTR+ME GKY Y+A N +    + YE  +VS   +G Y  
Sbjct: 364 NQNSDNGYTR-YETERQGMSDTRYMEGGKYYYNAKNENYYPANKYESGKVSTQNQGSY-G 421

Query: 863 NEDSKNEFDTMEEYERQEGYPESDD 937
           N+++ NEF+TMEEY+ QEGY ES +
Sbjct: 422 NDENPNEFNTMEEYKSQEGYEESQE 446


>gb|AFK38307.1| unknown [Lotus japonicus]
          Length = 261

 Score = 74.3 bits (181), Expect = 5e-11
 Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 5/92 (5%)
 Frame = +2

Query: 692 SSKEENNGYNNGYMVEQQGLSDTRFMENGKYPYDANNNHESSYEEEVSENGEGY-----Y 856
           ++   N G NNGY  +++G+SDTRFMENGKY Y+ +  +ES       E+G G      Y
Sbjct: 175 NNNNNNYGNNNGYERKREGMSDTRFMENGKYHYNVDTENESYNLNGYDESGRGRTENEGY 234

Query: 857 RNNEDSKNEFDTMEEYERQEGYPESDDRGYVP 952
                + NEFDTMEEYE+Q+     + +GY P
Sbjct: 235 DEKMQNPNEFDTMEEYEKQQ-----EAQGYTP 261


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