BLASTX nr result

ID: Atractylodes21_contig00003488 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003488
         (1069 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272297.1| PREDICTED: nephrocystin-3-like [Vitis vinifera]   101   9e-24
emb|CBI23024.3| unnamed protein product [Vitis vinifera]              101   9e-24
ref|XP_003602279.1| Kinesin light chain [Medicago truncatula] gi...    95   6e-22
ref|XP_003523356.1| PREDICTED: nephrocystin-3-like [Glycine max]      104   4e-20
ref|XP_002321987.1| predicted protein [Populus trichocarpa] gi|2...   100   8e-19

>ref|XP_002272297.1| PREDICTED: nephrocystin-3-like [Vitis vinifera]
          Length = 573

 Score =  101 bits (252), Expect(2) = 9e-24
 Identities = 48/82 (58%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -1

Query: 691 PLGD--DLETKLEELFSEIKSMVRMGNKGDALDLLEANYEAVREQMVAGGKTVEEAAILD 518
           P GD  D E +L+ELF+ +K+M++MGNK DA+DLL+ANYEAV+EQ+  G K +E+AAILD
Sbjct: 99  PSGDENDFERQLQELFNAVKTMIKMGNKKDAIDLLQANYEAVKEQIDVGAKGMEQAAILD 158

Query: 517 VIALGYMAIGDFKMVESVLNMV 452
           +I LGYM +GD K+V S+L+M+
Sbjct: 159 IIVLGYMLVGDLKLVRSLLDMM 180



 Score = 35.8 bits (81), Expect(2) = 9e-24
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = -2

Query: 954 IHSALLQKGIISFSLHPPKGKCNTSLYVVPSG--ISSRCLACYATTESLHVGGTTPGSHD 781
           +HS  L K ++ FSL   + KCN  LY++P+   +    L  +AT  S    G   G+H 
Sbjct: 17  MHSEDLTKDVMCFSLCLKRQKCNIKLYMIPASTIVHHGVLRPFATIGSSGADGINQGNHV 76

Query: 780 ASVVGGSDKSQ 748
           +  V   +K Q
Sbjct: 77  SLGVFAPNKFQ 87


>emb|CBI23024.3| unnamed protein product [Vitis vinifera]
          Length = 559

 Score =  101 bits (252), Expect(2) = 9e-24
 Identities = 48/82 (58%), Positives = 67/82 (81%), Gaps = 2/82 (2%)
 Frame = -1

Query: 691 PLGD--DLETKLEELFSEIKSMVRMGNKGDALDLLEANYEAVREQMVAGGKTVEEAAILD 518
           P GD  D E +L+ELF+ +K+M++MGNK DA+DLL+ANYEAV+EQ+  G K +E+AAILD
Sbjct: 85  PSGDENDFERQLQELFNAVKTMIKMGNKKDAIDLLQANYEAVKEQIDVGAKGMEQAAILD 144

Query: 517 VIALGYMAIGDFKMVESVLNMV 452
           +I LGYM +GD K+V S+L+M+
Sbjct: 145 IIVLGYMLVGDLKLVRSLLDMM 166



 Score = 35.8 bits (81), Expect(2) = 9e-24
 Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
 Frame = -2

Query: 954 IHSALLQKGIISFSLHPPKGKCNTSLYVVPSG--ISSRCLACYATTESLHVGGTTPGSHD 781
           +HS  L K ++ FSL   + KCN  LY++P+   +    L  +AT  S    G   G+H 
Sbjct: 3   MHSEDLTKDVMCFSLCLKRQKCNIKLYMIPASTIVHHGVLRPFATIGSSGADGINQGNHV 62

Query: 780 ASVVGGSDKSQ 748
           +  V   +K Q
Sbjct: 63  SLGVFAPNKFQ 73


>ref|XP_003602279.1| Kinesin light chain [Medicago truncatula]
           gi|355491327|gb|AES72530.1| Kinesin light chain
           [Medicago truncatula]
          Length = 580

 Score = 95.1 bits (235), Expect(2) = 6e-22
 Identities = 44/74 (59%), Positives = 59/74 (79%)
 Frame = -1

Query: 679 DLETKLEELFSEIKSMVRMGNKGDALDLLEANYEAVREQMVAGGKTVEEAAILDVIALGY 500
           + + +LEELF E+K M++MG K DA+DLL ANYE V+E++ AG K +EEAAILD++ALGY
Sbjct: 112 NFDKELEELFGEVKKMIKMGKKSDAIDLLNANYEMVKERLNAGTKGIEEAAILDILALGY 171

Query: 499 MAIGDFKMVESVLN 458
           MA+GD K V  +LN
Sbjct: 172 MAVGDLKSVGYLLN 185



 Score = 36.2 bits (82), Expect(2) = 6e-22
 Identities = 24/64 (37%), Positives = 32/64 (50%)
 Frame = -2

Query: 978 RMSRLCPSIHSALLQKGIISFSLHPPKGKCNTSLYVVPSGISSRCLACYATTESLHVGGT 799
           R S+  P + S    K IISFS+   K   N  LY++P    SR     +  +SL +GGT
Sbjct: 17  RTSKDRPHVLSLQEFKRIISFSVCNQKQNYNEKLYIIPIRTISRFCISRSFAKSLELGGT 76

Query: 798 TPGS 787
            P S
Sbjct: 77  GPQS 80


>ref|XP_003523356.1| PREDICTED: nephrocystin-3-like [Glycine max]
          Length = 577

 Score =  104 bits (259), Expect = 4e-20
 Identities = 50/77 (64%), Positives = 62/77 (80%)
 Frame = -1

Query: 682 DDLETKLEELFSEIKSMVRMGNKGDALDLLEANYEAVREQMVAGGKTVEEAAILDVIALG 503
           D LE +LEELF E+K M+ MGNK DA+DLL ANYE V+E++ AG K +EEAA LD+IALG
Sbjct: 108 DSLEKELEELFDEVKRMISMGNKNDAIDLLTANYEVVKERLNAGTKGIEEAATLDIIALG 167

Query: 502 YMAIGDFKMVESVLNMV 452
           YMA+GD K V S+LNM+
Sbjct: 168 YMAVGDLKFVGSLLNMM 184


>ref|XP_002321987.1| predicted protein [Populus trichocarpa] gi|222868983|gb|EEF06114.1|
           predicted protein [Populus trichocarpa]
          Length = 579

 Score =  100 bits (248), Expect = 8e-19
 Identities = 47/74 (63%), Positives = 60/74 (81%)
 Frame = -1

Query: 679 DLETKLEELFSEIKSMVRMGNKGDALDLLEANYEAVREQMVAGGKTVEEAAILDVIALGY 500
           D E +L+ELF E+K M++MGNK DA+DLL+ANYE V+EQ+ AG + +EEAA LD+IALGY
Sbjct: 111 DFERQLQELFDEVKMMIKMGNKNDAMDLLQANYEFVKEQINAGSRGIEEAATLDIIALGY 170

Query: 499 MAIGDFKMVESVLN 458
           MAIGD K V  +LN
Sbjct: 171 MAIGDLKSVGFILN 184


Top