BLASTX nr result

ID: Atractylodes21_contig00003458 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003458
         (1852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   382   e-109
ref|XP_002310965.1| predicted protein [Populus trichocarpa] gi|2...   377   e-107
ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|2...   375   e-106
ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   374   e-106
ref|XP_003638331.1| Ubiquitin carboxyl-terminal hydrolase family...   368   e-105

>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
            product [Vitis vinifera]
          Length = 1115

 Score =  382 bits (981), Expect(2) = e-109
 Identities = 196/243 (80%), Positives = 213/243 (87%), Gaps = 5/243 (2%)
 Frame = -3

Query: 920  PQPLNFTGSSIQKMADSLGKV-QTSDILYDEAPDIPLPELQGLKTLKVAFHHATKDEVVI 744
            PQP+ + G  ++ ++D L    QTSDILY E  DIPLPELQGLKTLKVAFHHATK+EVVI
Sbjct: 858  PQPIKYRG--VEHLSDMLLHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKEEVVI 915

Query: 743  HTITLPKQSTVGDLINDLKMKVELSHPDAELRLLEVAFHKIYKIFPLNQKIENIYDQYWT 564
            HTI LPKQSTVGD+INDLK KVELSHP+AELRLLEV +HKIYKIFPLN+KIENI DQYWT
Sbjct: 916  HTIRLPKQSTVGDVINDLKSKVELSHPNAELRLLEVFYHKIYKIFPLNEKIENINDQYWT 975

Query: 563  LRAEEIPEEEKDLGPQDRLIHVYHFMKEDA--DLFVQNFGEPFFLVIREGETLAEVKLRI 390
            LRAEEIPEEEK+LGP DRLIHVYHFMK+     + VQNFGEPFFLVI EGETLAEVK+RI
Sbjct: 976  LRAEEIPEEEKNLGPHDRLIHVYHFMKDTTQNQVQVQNFGEPFFLVIHEGETLAEVKVRI 1035

Query: 389  QKKLQVPDEEFSKWKFAFLSLGRPTYLQDSDVVSSRFQRR--VGAWEEYLGLEHSDNASK 216
            QKKLQVPDEEFSKWKFAFLSLGRP YLQDSD+VSSRFQRR   GAWE+YLGLEHSDNA K
Sbjct: 1036 QKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDNAPK 1095

Query: 215  RSY 207
            RSY
Sbjct: 1096 RSY 1098



 Score = 40.4 bits (93), Expect(2) = e-109
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = -1

Query: 145  NASKRSYSANQNRHTFEKP 89
            NA KRSY+ANQNRHTFEKP
Sbjct: 1092 NAPKRSYAANQNRHTFEKP 1110


>ref|XP_002310965.1| predicted protein [Populus trichocarpa] gi|222850785|gb|EEE88332.1|
            predicted protein [Populus trichocarpa]
          Length = 1131

 Score =  377 bits (969), Expect(2) = e-107
 Identities = 194/243 (79%), Positives = 208/243 (85%), Gaps = 5/243 (2%)
 Frame = -3

Query: 920  PQPLNFTGSSIQKMADSLGKV-QTSDILYDEAPDIPLPELQGLKTLKVAFHHATKDEVVI 744
            PQP+ F G  +  ++D L    QTSDILY E  DIPLPELQGLKTLKVAFHHATKDEVVI
Sbjct: 874  PQPIKFRG--VDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVI 931

Query: 743  HTITLPKQSTVGDLINDLKMKVELSHPDAELRLLEVAFHKIYKIFPLNQKIENIYDQYWT 564
            HTI LPKQSTVGD+INDLK KVELSHP AELRLLEV +HKIYKIFP N+KIENI DQYWT
Sbjct: 932  HTIRLPKQSTVGDVINDLKAKVELSHPSAELRLLEVFYHKIYKIFPHNEKIENINDQYWT 991

Query: 563  LRAEEIPEEEKDLGPQDRLIHVYHFMKEDA--DLFVQNFGEPFFLVIREGETLAEVKLRI 390
            LRAEE+PEEEK+L P DRLIHVYHFMK+     + VQNFGEPFFLVI EGETL EVK+RI
Sbjct: 992  LRAEEVPEEEKNLAPHDRLIHVYHFMKDTTQNQVQVQNFGEPFFLVIHEGETLTEVKMRI 1051

Query: 389  QKKLQVPDEEFSKWKFAFLSLGRPTYLQDSDVVSSRFQRR--VGAWEEYLGLEHSDNASK 216
            QKKLQVPDEEFSKWKFAFLSLGRP YLQDSD+VSSRFQRR   GAWE+YLGLEHSDNA K
Sbjct: 1052 QKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHSDNAPK 1111

Query: 215  RSY 207
            RSY
Sbjct: 1112 RSY 1114



 Score = 40.4 bits (93), Expect(2) = e-107
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = -1

Query: 145  NASKRSYSANQNRHTFEKP 89
            NA KRSY+ANQNRHTFEKP
Sbjct: 1108 NAPKRSYAANQNRHTFEKP 1126


>ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|222865510|gb|EEF02641.1|
            predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  375 bits (962), Expect(2) = e-106
 Identities = 191/243 (78%), Positives = 209/243 (86%), Gaps = 5/243 (2%)
 Frame = -3

Query: 920  PQPLNFTGSSIQKMADSLGKV-QTSDILYDEAPDIPLPELQGLKTLKVAFHHATKDEVVI 744
            PQP+ + G  +  ++D L    QTSDILY E  DIPLPELQGLKTLKVAFHHATKDEVVI
Sbjct: 859  PQPIKYRG--VDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVI 916

Query: 743  HTITLPKQSTVGDLINDLKMKVELSHPDAELRLLEVAFHKIYKIFPLNQKIENIYDQYWT 564
            HTI LPKQSTVGD+INDLK KVELSHP AELRLLEV +HKIYKIFP N+KIENI DQYWT
Sbjct: 917  HTIRLPKQSTVGDVINDLKTKVELSHPSAELRLLEVFYHKIYKIFPHNEKIENINDQYWT 976

Query: 563  LRAEEIPEEEKDLGPQDRLIHVYHFMKEDA--DLFVQNFGEPFFLVIREGETLAEVKLRI 390
            LRAEEIPEEEK+LGP DRLIHVYHFMK+     + VQNFGEPFFLVI EGE LA+VK+R+
Sbjct: 977  LRAEEIPEEEKNLGPHDRLIHVYHFMKDTTQNQVQVQNFGEPFFLVIHEGEALADVKMRV 1036

Query: 389  QKKLQVPDEEFSKWKFAFLSLGRPTYLQDSDVVSSRFQRR--VGAWEEYLGLEHSDNASK 216
            Q+KLQVPDEEFSKWKFAFLSLGRP YLQDSD+VS+RFQRR   GAWE+YLGLEHSDNA K
Sbjct: 1037 QRKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSNRFQRRDIYGAWEQYLGLEHSDNAPK 1096

Query: 215  RSY 207
            RSY
Sbjct: 1097 RSY 1099



 Score = 40.4 bits (93), Expect(2) = e-106
 Identities = 17/19 (89%), Positives = 18/19 (94%)
 Frame = -1

Query: 145  NASKRSYSANQNRHTFEKP 89
            NA KRSY+ANQNRHTFEKP
Sbjct: 1093 NAPKRSYAANQNRHTFEKP 1111


>ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
            sativus] gi|449503435|ref|XP_004162001.1| PREDICTED:
            ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
            sativus]
          Length = 1118

 Score =  374 bits (959), Expect(2) = e-106
 Identities = 188/243 (77%), Positives = 211/243 (86%), Gaps = 5/243 (2%)
 Frame = -3

Query: 920  PQPLNFTGSSIQKMADSLGKV-QTSDILYDEAPDIPLPELQGLKTLKVAFHHATKDEVVI 744
            PQP+ + G  ++ ++D L    QTSDILY E  DIPLPELQGLKTLKVAFHHATKDEVVI
Sbjct: 861  PQPIKYRG--VEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVVI 918

Query: 743  HTITLPKQSTVGDLINDLKMKVELSHPDAELRLLEVAFHKIYKIFPLNQKIENIYDQYWT 564
            HTI LPKQSTV D+INDLK KVELSHPDAELRLLEV +HKIYK+FP N+KIENI DQYWT
Sbjct: 919  HTIRLPKQSTVADVINDLKTKVELSHPDAELRLLEVFYHKIYKVFPPNEKIENINDQYWT 978

Query: 563  LRAEEIPEEEKDLGPQDRLIHVYHFMKEDA--DLFVQNFGEPFFLVIREGETLAEVKLRI 390
            LRAEEIPEEEK+LGP DRLIHVYHF K+ A   + +QNFGEPFFLVI EGETLA++KLRI
Sbjct: 979  LRAEEIPEEEKNLGPNDRLIHVYHFTKDTAQNQMQIQNFGEPFFLVINEGETLADIKLRI 1038

Query: 389  QKKLQVPDEEFSKWKFAFLSLGRPTYLQDSDVVSSRFQRR--VGAWEEYLGLEHSDNASK 216
            QKKLQVPDEEF+KWKFAFLSLGRP YLQD+D+VS+RFQRR   GAWE+YLGLEH+DNA K
Sbjct: 1039 QKKLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSNRFQRRDVYGAWEQYLGLEHTDNAPK 1098

Query: 215  RSY 207
            R+Y
Sbjct: 1099 RAY 1101



 Score = 39.3 bits (90), Expect(2) = e-106
 Identities = 16/19 (84%), Positives = 18/19 (94%)
 Frame = -1

Query: 145  NASKRSYSANQNRHTFEKP 89
            NA KR+Y+ANQNRHTFEKP
Sbjct: 1095 NAPKRAYTANQNRHTFEKP 1113


>ref|XP_003638331.1| Ubiquitin carboxyl-terminal hydrolase family protein [Medicago
           truncatula] gi|355504266|gb|AES85469.1| Ubiquitin
           carboxyl-terminal hydrolase family protein [Medicago
           truncatula]
          Length = 611

 Score =  368 bits (945), Expect(2) = e-105
 Identities = 186/243 (76%), Positives = 208/243 (85%), Gaps = 5/243 (2%)
 Frame = -3

Query: 920 PQPLNFTGSSIQKMADSLGKV-QTSDILYDEAPDIPLPELQGLKTLKVAFHHATKDEVVI 744
           PQP+   G  +  ++D L    QTSDILY E  DIPLPELQGLKTLKVAFHHA KDEVV 
Sbjct: 128 PQPIKHRG--VDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHAIKDEVVS 185

Query: 743 HTITLPKQSTVGDLINDLKMKVELSHPDAELRLLEVAFHKIYKIFPLNQKIENIYDQYWT 564
           HTI LPKQSTVGD+++DLK KVELSHPDAELRLLEV +HKIYK+FP N+KIENI DQYWT
Sbjct: 186 HTIRLPKQSTVGDVLDDLKTKVELSHPDAELRLLEVFYHKIYKVFPSNEKIENINDQYWT 245

Query: 563 LRAEEIPEEEKDLGPQDRLIHVYHFMKEDA--DLFVQNFGEPFFLVIREGETLAEVKLRI 390
           LRAEEIPEEEK++GPQDRLIHVYHF K+ A   + +QNFG+PFFLVI EGE L+E+K+RI
Sbjct: 246 LRAEEIPEEEKNIGPQDRLIHVYHFTKDTAQNQMQIQNFGDPFFLVIHEGEALSEIKVRI 305

Query: 389 QKKLQVPDEEFSKWKFAFLSLGRPTYLQDSDVVSSRFQRR--VGAWEEYLGLEHSDNASK 216
           QKKLQVPDEEFSKWKFAFLSLGRP YLQDSD+VSSRFQRR   GAWE+YLGLEH+DNA K
Sbjct: 306 QKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRRDVYGAWEQYLGLEHTDNAPK 365

Query: 215 RSY 207
           RSY
Sbjct: 366 RSY 368



 Score = 43.5 bits (101), Expect(2) = e-105
 Identities = 18/24 (75%), Positives = 20/24 (83%)
 Frame = -1

Query: 145 NASKRSYSANQNRHTFEKPNERKL 74
           NA KRSY+ NQNRHTFEKP  RK+
Sbjct: 362 NAPKRSYAVNQNRHTFEKPGSRKI 385