BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003335
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata...   211   1e-52
ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|2...   208   5e-52
ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thalian...   208   7e-52
ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...   205   6e-51
ref|XP_002324195.1| predicted protein [Populus trichocarpa] gi|1...   204   7e-51

>ref|XP_002879336.1| 40S ribosomal protein S3 [Arabidopsis lyrata subsp. lyrata]
           gi|297325175|gb|EFH55595.1| 40S ribosomal protein S3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 250

 Score =  211 bits (536), Expect = 1e-52
 Identities = 108/131 (82%), Positives = 113/131 (86%)
 Frame = -3

Query: 602 LLGGLAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVKEYI 423
           LLGGLAVRRACYGVLRFVME+GAKGCEVIVSGKLRA RAKSMKF DGYMVSSGQP KEYI
Sbjct: 109 LLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFMDGYMVSSGQPTKEYI 168

Query: 422 DSAVRHVLLRQGVLGIKVKIMLAWDPTGKLGPKTPLPDNVIIHMPKDDVVPLPPKEVEEY 243
           DSAVRHVLLRQGVLGIKVKIML WDPTGK GPKTPLPD VIIH PKDDVV L P ++   
Sbjct: 169 DSAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVNLAPAQIA-- 226

Query: 242 RPPLVVADEPL 210
            P  +V + PL
Sbjct: 227 APVTLVPEAPL 237


>ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|222869146|gb|EEF06277.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  208 bits (530), Expect = 5e-52
 Identities = 106/132 (80%), Positives = 112/132 (84%)
 Frame = -3

Query: 602 LLGGLAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVKEYI 423
           LLGGLAVRRACYGVLRFVME+GAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVKEYI
Sbjct: 109 LLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYI 168

Query: 422 DSAVRHVLLRQGVLGIKVKIMLAWDPTGKLGPKTPLPDNVIIHMPKDDVVPLPPKEVEEY 243
           DSAVRHVLLRQGVLGIKVKIML WDP GK+GP TPLPD V IH         PPKE EEY
Sbjct: 169 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTIH---------PPKEEEEY 219

Query: 242 RPPLVVADEPLP 207
            PPL+  +  +P
Sbjct: 220 VPPLLTTNIEIP 231


>ref|NP_180719.1| 40S ribosomal protein S3-1 [Arabidopsis thaliana]
           gi|75206146|sp|Q9SIP7.1|RS31_ARATH RecName: Full=40S
           ribosomal protein S3-1
           gi|14190419|gb|AAK55690.1|AF378887_1 At2g31610/T9H9.13
           [Arabidopsis thaliana] gi|4582468|gb|AAD24852.1| 40S
           ribosomal protein; contains C-terminal domain
           [Arabidopsis thaliana] gi|15028253|gb|AAK76715.1|
           putative 40S ribosomal protein; contains C-terminal
           domain [Arabidopsis thaliana] gi|15450571|gb|AAK96463.1|
           At2g31610/T9H9.13 [Arabidopsis thaliana]
           gi|15451084|gb|AAK96813.1| 40S ribosomal protein
           [Arabidopsis thaliana] gi|20148377|gb|AAM10079.1| 40S
           ribosomal protein; contains C-terminal domain
           [Arabidopsis thaliana] gi|20258907|gb|AAM14147.1|
           putative 40S ribosomal protein [Arabidopsis thaliana]
           gi|330253473|gb|AEC08567.1| 40S ribosomal protein S3-1
           [Arabidopsis thaliana]
          Length = 250

 Score =  208 bits (529), Expect = 7e-52
 Identities = 107/131 (81%), Positives = 112/131 (85%)
 Frame = -3

Query: 602 LLGGLAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVKEYI 423
           LLGGLAVRRACYGVLRFVME+GAKGCEVIVSGKLRA RAKSMKFKDGYMVSSGQP KEYI
Sbjct: 109 LLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAARAKSMKFKDGYMVSSGQPTKEYI 168

Query: 422 DSAVRHVLLRQGVLGIKVKIMLAWDPTGKLGPKTPLPDNVIIHMPKDDVVPLPPKEVEEY 243
           D+AVRHVLLRQGVLGIKVKIML WDPTGK GPKTPLPD VIIH PKDDVV   P +    
Sbjct: 169 DAAVRHVLLRQGVLGIKVKIMLDWDPTGKSGPKTPLPDVVIIHAPKDDVVYSAPAQAA-- 226

Query: 242 RPPLVVADEPL 210
            P  +V + PL
Sbjct: 227 APVTLVQEAPL 237


>ref|XP_002275541.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297743020|emb|CBI35887.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  205 bits (521), Expect = 6e-51
 Identities = 106/129 (82%), Positives = 111/129 (86%), Gaps = 1/129 (0%)
 Frame = -3

Query: 602 LLGGLAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVKEYI 423
           LLGGLAVRRACYGVLRFVME+GAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVKEYI
Sbjct: 109 LLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYI 168

Query: 422 DSAVRHVLLRQGVLGIKVKIMLAWDPTGKLGPKTPLPDNVIIHMPKDDVVPLPPKEVEEY 243
           DSAVRHVLLRQGVLGIKVKIML WDP GK GPKTPLPD V IH PK++         EEY
Sbjct: 169 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEE---------EEY 219

Query: 242 -RPPLVVAD 219
            RPP+  AD
Sbjct: 220 LRPPIPAAD 228


>ref|XP_002324195.1| predicted protein [Populus trichocarpa] gi|118483222|gb|ABK93514.1|
           unknown [Populus trichocarpa]
           gi|118487214|gb|ABK95435.1| unknown [Populus
           trichocarpa] gi|222865629|gb|EEF02760.1| predicted
           protein [Populus trichocarpa]
          Length = 234

 Score =  204 bits (520), Expect = 7e-51
 Identities = 106/133 (79%), Positives = 113/133 (84%), Gaps = 1/133 (0%)
 Frame = -3

Query: 602 LLGGLAVRRACYGVLRFVMENGAKGCEVIVSGKLRAQRAKSMKFKDGYMVSSGQPVKEYI 423
           LLGGLAVRRACYGVLRFVME+GAKGCEVIVSGKLRAQRAKSMKFKDGYM+SSGQPVKEYI
Sbjct: 109 LLGGLAVRRACYGVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYI 168

Query: 422 DSAVRHVLLRQGVLGIKVKIMLAWDPTGKLGPKTPLPDNVIIHMPKDDVVPLPPKEVEEY 243
           DSAVRHVLLRQGVLGIKVKIML WDP GK+GP TPLPD V IH         PPKE EEY
Sbjct: 169 DSAVRHVLLRQGVLGIKVKIMLDWDPKGKVGPMTPLPDLVTIH---------PPKEDEEY 219

Query: 242 -RPPLVVADEPLP 207
             PP++ A+  +P
Sbjct: 220 VAPPVMTANIEIP 232