BLASTX nr result

ID: Atractylodes21_contig00003290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003290
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524187.1| Nuclear import protein mog1, putative [Ricin...   303   3e-80
ref|XP_004135179.1| PREDICTED: probable ran guanine nucleotide r...   295   6e-78
ref|XP_002887249.1| predicted protein [Arabidopsis lyrata subsp....   293   2e-77
ref|NP_564972.1| Mog1/PsbP/DUF1795-like photosystem II reaction ...   291   8e-77
ref|NP_001241181.1| uncharacterized protein LOC100786093 [Glycin...   288   9e-76

>ref|XP_002524187.1| Nuclear import protein mog1, putative [Ricinus communis]
           gi|223536556|gb|EEF38202.1| Nuclear import protein mog1,
           putative [Ricinus communis]
          Length = 203

 Score =  303 bits (776), Expect = 3e-80
 Identities = 144/200 (72%), Positives = 175/200 (87%)
 Frame = -3

Query: 752 EQFPERPLFGGAISTTFPLRFEDVSNIREVPDHQEVFVDPERDESLIFELLDLKHDVADN 573
           + + ERPLFGGAI+T+FPLRF+DVSNIR+VPDHQEVFVDP RDESLIFELLD KHD+ DN
Sbjct: 4   DSYTERPLFGGAITTSFPLRFQDVSNIRQVPDHQEVFVDPARDESLIFELLDFKHDIGDN 63

Query: 572 GSATWFLQDLAREQGAEGNIVTEQSAVFEAPGLQFRNMPAVITSAVAQMAISKGRQGREA 393
           GSATWFLQDLA EQ AEG  + EQS V EAPGL +R+ P V+++AV QM ISKGRQGREA
Sbjct: 64  GSATWFLQDLANEQDAEGCTLIEQSGVVEAPGLLYRDNPTVVSTAVGQMNISKGRQGREA 123

Query: 392 QNLVKVYLANLRLKGVNTDVLITAYEPVFINPLSESASSVGAGLTVPAAETGRTPMAEIF 213
           QN+V+VYLAN+RLKGV++DVLITAYEPV I+PLSE+A +VGAG+ +PAA++G  PM+E+F
Sbjct: 124 QNVVRVYLANIRLKGVSSDVLITAYEPVLIHPLSETARTVGAGMAIPAAQSGFLPMSEVF 183

Query: 212 KQVVSTFRINDWNLFGADAI 153
           K  VSTF++NDWNLFG+ A+
Sbjct: 184 KLAVSTFKVNDWNLFGSAAV 203


>ref|XP_004135179.1| PREDICTED: probable ran guanine nucleotide release factor-like
           [Cucumis sativus] gi|449478418|ref|XP_004155313.1|
           PREDICTED: probable ran guanine nucleotide release
           factor-like [Cucumis sativus]
          Length = 202

 Score =  295 bits (756), Expect = 6e-78
 Identities = 145/195 (74%), Positives = 167/195 (85%)
 Frame = -3

Query: 740 ERPLFGGAISTTFPLRFEDVSNIREVPDHQEVFVDPERDESLIFELLDLKHDVADNGSAT 561
           ER LFGGAI +TFPLRF+DVSN+R+VPDHQEVFVDP RDESLIFELLD KHDV DNGSA 
Sbjct: 8   ERALFGGAIVSTFPLRFQDVSNVRQVPDHQEVFVDPSRDESLIFELLDFKHDVGDNGSAV 67

Query: 560 WFLQDLAREQGAEGNIVTEQSAVFEAPGLQFRNMPAVITSAVAQMAISKGRQGREAQNLV 381
           WFLQDLA EQ AEG++V EQS V EAP L + N+P+V T+AV QMAISKGRQGREAQN+V
Sbjct: 68  WFLQDLATEQDAEGSVVIEQSGVIEAPELCYGNIPSVATTAVGQMAISKGRQGREAQNIV 127

Query: 380 KVYLANLRLKGVNTDVLITAYEPVFINPLSESASSVGAGLTVPAAETGRTPMAEIFKQVV 201
           +VYLANLRLKGV TDVLI+AYEP+ INPLSESASSVG+GL  PA+ +G  PM E+FK  V
Sbjct: 128 RVYLANLRLKGVGTDVLISAYEPIVINPLSESASSVGSGLATPASHSGYMPMPEVFKLAV 187

Query: 200 STFRINDWNLFGADA 156
           S+F++ DW+LFGA A
Sbjct: 188 SSFKVCDWSLFGAPA 202


>ref|XP_002887249.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297333090|gb|EFH63508.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 202

 Score =  293 bits (751), Expect = 2e-77
 Identities = 141/194 (72%), Positives = 168/194 (86%)
 Frame = -3

Query: 737 RPLFGGAISTTFPLRFEDVSNIREVPDHQEVFVDPERDESLIFELLDLKHDVADNGSATW 558
           RPLFGGAIST FP RF+DVSNIR+VPDHQEVFVDP RDESLIFELLD K +V D GSA+W
Sbjct: 9   RPLFGGAISTVFPQRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKTEVGDIGSASW 68

Query: 557 FLQDLAREQGAEGNIVTEQSAVFEAPGLQFRNMPAVITSAVAQMAISKGRQGREAQNLVK 378
           FL DLAREQ AEG  + EQS V EAPGL FRN+PA+ T+A+ +MAISKGRQGREAQNLV+
Sbjct: 69  FLNDLAREQDAEGFQLIEQSEVIEAPGLSFRNIPAIATTAIGEMAISKGRQGREAQNLVR 128

Query: 377 VYLANLRLKGVNTDVLITAYEPVFINPLSESASSVGAGLTVPAAETGRTPMAEIFKQVVS 198
           VY+ANLRLKGV+TDVL+TAYEP+ INPLS+SA +VG+GL VPA+++G  PM ++ KQ +S
Sbjct: 129 VYVANLRLKGVDTDVLVTAYEPILINPLSKSADAVGSGLAVPASQSGIMPMCDVIKQSLS 188

Query: 197 TFRINDWNLFGADA 156
           TF++NDWNLFG+ A
Sbjct: 189 TFKVNDWNLFGSSA 202


>ref|NP_564972.1| Mog1/PsbP/DUF1795-like photosystem II reaction center PsbP-like
           protein [Arabidopsis thaliana]
           gi|14335134|gb|AAK59847.1| At1g69680/T6C23_12
           [Arabidopsis thaliana] gi|18655341|gb|AAL76126.1|
           At1g69680/T6C23_12 [Arabidopsis thaliana]
           gi|21593600|gb|AAM65567.1| unknown [Arabidopsis
           thaliana] gi|332196841|gb|AEE34962.1|
           Mog1/PsbP/DUF1795-like photosystem II reaction center
           PsbP-like protein [Arabidopsis thaliana]
          Length = 202

 Score =  291 bits (746), Expect = 8e-77
 Identities = 141/194 (72%), Positives = 167/194 (86%)
 Frame = -3

Query: 737 RPLFGGAISTTFPLRFEDVSNIREVPDHQEVFVDPERDESLIFELLDLKHDVADNGSATW 558
           RPLFGGAIST FP RF+DVSNIR+VPDHQEVFVDP RDESLIFELLD K +V D GSA+W
Sbjct: 9   RPLFGGAISTVFPQRFQDVSNIRQVPDHQEVFVDPSRDESLIFELLDFKAEVGDIGSASW 68

Query: 557 FLQDLAREQGAEGNIVTEQSAVFEAPGLQFRNMPAVITSAVAQMAISKGRQGREAQNLVK 378
           FL DLA EQ AEG  + EQS V EAPGL FRN+ AV T+A+ +MAISKGRQGREAQNLV+
Sbjct: 69  FLNDLASEQDAEGFQLIEQSEVIEAPGLSFRNISAVATTAIGEMAISKGRQGREAQNLVR 128

Query: 377 VYLANLRLKGVNTDVLITAYEPVFINPLSESASSVGAGLTVPAAETGRTPMAEIFKQVVS 198
           VY+AN+RLKGV+TDVL+TAYEP+ INPLSESA +VG+GL VPA+++G+ PM +I KQ +S
Sbjct: 129 VYVANIRLKGVDTDVLVTAYEPILINPLSESADAVGSGLAVPASQSGKMPMCDIIKQSLS 188

Query: 197 TFRINDWNLFGADA 156
           TF++NDWNLFG+ A
Sbjct: 189 TFKVNDWNLFGSSA 202


>ref|NP_001241181.1| uncharacterized protein LOC100786093 [Glycine max]
           gi|255642279|gb|ACU21404.1| unknown [Glycine max]
          Length = 198

 Score =  288 bits (737), Expect = 9e-76
 Identities = 139/191 (72%), Positives = 164/191 (85%)
 Frame = -3

Query: 740 ERPLFGGAISTTFPLRFEDVSNIREVPDHQEVFVDPERDESLIFELLDLKHDVADNGSAT 561
           + PLFGG IS+TFP RF+DVS+IR+VPDHQEVF DP RDESLIFELL+ K DVADNGSA 
Sbjct: 8   QHPLFGGKISSTFPHRFQDVSSIRQVPDHQEVFADPSRDESLIFELLEFKPDVADNGSAG 67

Query: 560 WFLQDLAREQGAEGNIVTEQSAVFEAPGLQFRNMPAVITSAVAQMAISKGRQGREAQNLV 381
           WFLQDLA EQ AEG++V EQS V EAPGL + N PAV+T+AV QMAISKGRQGREAQN+V
Sbjct: 68  WFLQDLASEQDAEGSVVIEQSGVLEAPGLMYNNTPAVVTTAVGQMAISKGRQGREAQNIV 127

Query: 380 KVYLANLRLKGVNTDVLITAYEPVFINPLSESASSVGAGLTVPAAETGRTPMAEIFKQVV 201
           KVYLANLRL+GV+TDVL++AYEP+ INPLSESA +VGAG+ VPAA+ G  PM E+FK  V
Sbjct: 128 KVYLANLRLRGVDTDVLVSAYEPIVINPLSESADTVGAGVAVPAAQAGCMPMDEVFKLAV 187

Query: 200 STFRINDWNLF 168
           ++FR++DW LF
Sbjct: 188 TSFRVHDWGLF 198


Top