BLASTX nr result

ID: Atractylodes21_contig00003288 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003288
         (1399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-a...   214   3e-53
ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-a...   211   3e-52
ref|XP_002529898.1| small nuclear ribonucleoprotein-associated p...   207   4e-51
ref|XP_002529896.1| small nuclear ribonucleoprotein-associated p...   207   4e-51
ref|XP_002332199.1| predicted protein [Populus trichocarpa] gi|2...   206   9e-51

>ref|XP_002263359.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'
            [Vitis vinifera] gi|147774905|emb|CAN61706.1|
            hypothetical protein VITISV_001610 [Vitis vinifera]
          Length = 276

 Score =  214 bits (546), Expect = 3e-53
 Identities = 114/159 (71%), Positives = 119/159 (74%)
 Frame = -1

Query: 1279 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKNEEREDRRTL 1100
            LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPPAKG KKNEERE+RRTL
Sbjct: 10   LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKG-KKNEEREERRTL 68

Query: 1099 GLVLLRGEEVISMTVEGPPPPDENXXXXXXXXXXXXXXXXXXXXXGIPTAPLIQAQXXXX 920
            GLVLLRGEEVISMTVEGPPPP+E+                     GIPTAPLIQAQ    
Sbjct: 69   GLVLLRGEEVISMTVEGPPPPEESRAKAVGAAAMAGPGIGRAAGRGIPTAPLIQAQPGLA 128

Query: 919  XXXXXXXXXXXGMMQPQISRPPVPNMSAPPMNYPQAPVI 803
                       GMMQPQISRPPVP +SAPPM YP APVI
Sbjct: 129  GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPVI 167


>ref|XP_004134546.1| PREDICTED: small nuclear ribonucleoprotein-associated protein B'-like
            [Cucumis sativus] gi|449490639|ref|XP_004158663.1|
            PREDICTED: small nuclear ribonucleoprotein-associated
            protein B'-like [Cucumis sativus]
          Length = 284

 Score =  211 bits (538), Expect = 3e-52
 Identities = 109/159 (68%), Positives = 117/159 (73%)
 Frame = -1

Query: 1279 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKNEEREDRRTL 1100
            LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPPAKG K NEER++RRTL
Sbjct: 10   LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKTNEERDERRTL 69

Query: 1099 GLVLLRGEEVISMTVEGPPPPDENXXXXXXXXXXXXXXXXXXXXXGIPTAPLIQAQXXXX 920
            GLVLLRGEEVISMTVEGPPP +E+                     GIPTAPL+QAQ    
Sbjct: 70   GLVLLRGEEVISMTVEGPPPAEESRAKAVNAAAMAGPGIGRAAGRGIPTAPLVQAQPGLA 129

Query: 919  XXXXXXXXXXXGMMQPQISRPPVPNMSAPPMNYPQAPVI 803
                       GMMQPQISRPPVP +SAPPM YP AP+I
Sbjct: 130  GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMTYPAAPII 168


>ref|XP_002529898.1| small nuclear ribonucleoprotein-associated protein, putative [Ricinus
            communis] gi|223530625|gb|EEF32501.1| small nuclear
            ribonucleoprotein-associated protein, putative [Ricinus
            communis]
          Length = 275

 Score =  207 bits (528), Expect = 4e-51
 Identities = 111/159 (69%), Positives = 117/159 (73%)
 Frame = -1

Query: 1279 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKNEEREDRRTL 1100
            LQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPPAKG K NEEREDRRTL
Sbjct: 10   LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 1099 GLVLLRGEEVISMTVEGPPPPDENXXXXXXXXXXXXXXXXXXXXXGIPTAPLIQAQXXXX 920
            GLVLLRGEEVISMTVEGPPP +E+                     GIPTAPLIQAQ    
Sbjct: 70   GLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLA 129

Query: 919  XXXXXXXXXXXGMMQPQISRPPVPNMSAPPMNYPQAPVI 803
                       GMMQPQISRPPVP +SAPPM+YP  PVI
Sbjct: 130  GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYP-PPVI 167


>ref|XP_002529896.1| small nuclear ribonucleoprotein-associated protein, putative [Ricinus
            communis] gi|223530623|gb|EEF32499.1| small nuclear
            ribonucleoprotein-associated protein, putative [Ricinus
            communis]
          Length = 275

 Score =  207 bits (528), Expect = 4e-51
 Identities = 111/159 (69%), Positives = 117/159 (73%)
 Frame = -1

Query: 1279 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKNEEREDRRTL 1100
            LQ+INYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPPAKG K NEEREDRRTL
Sbjct: 10   LQHINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 1099 GLVLLRGEEVISMTVEGPPPPDENXXXXXXXXXXXXXXXXXXXXXGIPTAPLIQAQXXXX 920
            GLVLLRGEEVISMTVEGPPP +E+                     GIPTAPLIQAQ    
Sbjct: 70   GLVLLRGEEVISMTVEGPPPQEESRAKAVSATAVAGPGIGRAAGRGIPTAPLIQAQPGLA 129

Query: 919  XXXXXXXXXXXGMMQPQISRPPVPNMSAPPMNYPQAPVI 803
                       GMMQPQISRPPVP +SAPPM+YP  PVI
Sbjct: 130  GPVRGVGGPAPGMMQPQISRPPVPQLSAPPMSYP-PPVI 167


>ref|XP_002332199.1| predicted protein [Populus trichocarpa] gi|222875306|gb|EEF12437.1|
            predicted protein [Populus trichocarpa]
          Length = 289

 Score =  206 bits (525), Expect = 9e-51
 Identities = 108/154 (70%), Positives = 111/154 (72%)
 Frame = -1

Query: 1279 LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVIGDCEEFRKLPPAKGAKKNEEREDRRTL 1100
            LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLV+GDCEEFRKLPPAKG K NEEREDRRTL
Sbjct: 10   LQYINYRMRVTIQDGRQLVGKFMAFDRHMNLVLGDCEEFRKLPPAKGKKNNEEREDRRTL 69

Query: 1099 GLVLLRGEEVISMTVEGPPPPDENXXXXXXXXXXXXXXXXXXXXXGIPTAPLIQAQXXXX 920
            GLVLLRGEEVISMTVEGPPPP+E+                     GIPTAPLIQAQ    
Sbjct: 70   GLVLLRGEEVISMTVEGPPPPEESRAKAVSAAAASGPGLGRAAGRGIPTAPLIQAQPGLA 129

Query: 919  XXXXXXXXXXXGMMQPQISRPPVPNMSAPPMNYP 818
                       GMMQPQ  RPPVP  SAPPM YP
Sbjct: 130  GPVRGVGGPSPGMMQPQFMRPPVPQHSAPPMTYP 163


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