BLASTX nr result

ID: Atractylodes21_contig00003145 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003145
         (211 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08705.1|RBS_HELAN RecName: Full=Ribulose bisphosphate carbox...    81   8e-14
gb|AAF19793.1|AF162210_1 ribulose-1,5-bisphosphate carboxylase/o...    80   1e-13
sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carbo...    79   3e-13
gb|ACO35888.1| ribulose-1,5-bisphosphate carboxylase/oxygenase s...    78   6e-13
sp|Q39744.1|RBS2_FLAPR RecName: Full=Ribulose bisphosphate carbo...    78   8e-13

>sp|P08705.1|RBS_HELAN RecName: Full=Ribulose bisphosphate carboxylase small chain,
           chloroplastic; Short=RuBisCO small subunit; Flags:
           Precursor gi|18808|emb|CAA68490.1| ribulose bisphosphate
           carboxylase [Helianthus annuus]
           gi|755735|emb|CAA28737.1| RuBisCO (SSU) [Helianthus
           annuus]
          Length = 178

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = -1

Query: 130 PAQATLVAPFTGLKSNAAFPTTKKAKNDFSTLPSNGGRVQCMK 2
           PAQA +VAPFTGLKSNAAFPTTKKA NDFSTLPSNGGRVQCMK
Sbjct: 16  PAQANMVAPFTGLKSNAAFPTTKKA-NDFSTLPSNGGRVQCMK 57


>gb|AAF19793.1|AF162210_1 ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Lactuca sativa]
          Length = 181

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 37/43 (86%), Positives = 39/43 (90%)
 Frame = -1

Query: 130 PAQATLVAPFTGLKSNAAFPTTKKAKNDFSTLPSNGGRVQCMK 2
           PAQA+L APFTGLKSN AFP TKKA NDFS+LPSNGGRVQCMK
Sbjct: 17  PAQASLAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMK 59


>sp|Q39746.1|RBS4_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 4,
           chloroplastic; Short=RuBisCO small subunit 4; Flags:
           Precursor gi|967225|gb|AAB67848.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit protein [Flaveria pringlei]
          Length = 178

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 39/43 (90%), Positives = 40/43 (93%)
 Frame = -1

Query: 130 PAQATLVAPFTGLKSNAAFPTTKKAKNDFSTLPSNGGRVQCMK 2
           PAQA +VAPFTGLKSNAAFP TKKA NDFSTLPSNGGRVQCMK
Sbjct: 16  PAQANMVAPFTGLKSNAAFPATKKA-NDFSTLPSNGGRVQCMK 57


>gb|ACO35888.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
           [Ageratina adenophora]
          Length = 178

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = -1

Query: 130 PAQATLVAPFTGLKSNAAFPTTKKAKNDFSTLPSNGGRVQCMK 2
           PAQA +VAPFTGLKSNAAFP TKKA NDFSTLP+NGGRVQCMK
Sbjct: 16  PAQANMVAPFTGLKSNAAFPATKKA-NDFSTLPNNGGRVQCMK 57


>sp|Q39744.1|RBS2_FLAPR RecName: Full=Ribulose bisphosphate carboxylase small chain 2,
           chloroplastic; Short=RuBisCO small subunit 2; Flags:
           Precursor gi|967221|gb|AAB67846.1|
           ribulose-1,5-bisphosphate carboxylase/oxygenase small
           subunit protein [Flaveria pringlei]
          Length = 178

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 38/43 (88%), Positives = 39/43 (90%)
 Frame = -1

Query: 130 PAQATLVAPFTGLKSNAAFPTTKKAKNDFSTLPSNGGRVQCMK 2
           PAQA +VAPFTGLKSN AFP TKKA NDFSTLPSNGGRVQCMK
Sbjct: 16  PAQANMVAPFTGLKSNVAFPATKKA-NDFSTLPSNGGRVQCMK 57


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