BLASTX nr result

ID: Atractylodes21_contig00003141 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00003141
         (1046 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [V...   613   e-173
emb|CBI34473.3| unnamed protein product [Vitis vinifera]              613   e-173
ref|XP_002515859.1| DNA primase, putative [Ricinus communis] gi|...   587   e-165
ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase ...   571   e-160
ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [G...   568   e-160

>ref|XP_002270595.2| PREDICTED: DNA primase small subunit-like [Vitis vinifera]
          Length = 457

 Score =  613 bits (1581), Expect = e-173
 Identities = 286/342 (83%), Positives = 317/342 (92%), Gaps = 4/342 (1%)
 Frame = -3

Query: 1044 KWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRYQSFKSASELENGIKDKCPFKIDIG 865
            KWMSYGNDG+HPACD+SY GRREFSFTL +DIYLR+QSF S  E+EN IK+KCPFKIDIG
Sbjct: 53   KWMSYGNDGKHPACDQSYIGRREFSFTLADDIYLRFQSFNSVHEMENSIKEKCPFKIDIG 112

Query: 864  PVYSVDPAKRLAYVQSGDNIFTPVERELVFDIDISDYDDARYCCSGADVCLDCWPLMTIA 685
            PVYSVDP KR AY QSGDN+FTPVERELVFDIDI+DYDD RYCCSGADVCLDCWPLMT+A
Sbjct: 113  PVYSVDPTKRHAYAQSGDNVFTPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVA 172

Query: 684  IKVIDTALRDDFGFNHVLWVYSGRRGVHCWVCDGKARRFNNEQRAAVADYFRMYKGNSNS 505
            IKVIDTALRDDFGFNH+LWVYSGRRGVHCWVCDG+ARR +NEQRAA+ADYFR+YKGN NS
Sbjct: 173  IKVIDTALRDDFGFNHILWVYSGRRGVHCWVCDGRARRLSNEQRAAIADYFRVYKGNENS 232

Query: 504  KSKVSLVGPALHPFLVRSYGDVLKDFFEEKLLPSQQLLS-DERYEKILEMIPDESITAEL 328
            + KVSLVGPALHPFL RSY +VLKDFFEEKLLP Q+L S +ERYEKIL++IPDESIT+EL
Sbjct: 233  QKKVSLVGPALHPFLARSYTEVLKDFFEEKLLPGQKLFSTEERYEKILKIIPDESITSEL 292

Query: 327  RGKW--NRRSS-SGKDVNVVRWEQLKHLLQSGKQKAPGIRRCVEEIVFSFTYPRLDMEVS 157
            RGKW  NRRSS S +D+N +RWEQLKH+LQSGKQKA G+RRCVEEIVFS+TYPRLDMEVS
Sbjct: 293  RGKWQENRRSSISKEDINAIRWEQLKHMLQSGKQKAQGLRRCVEEIVFSYTYPRLDMEVS 352

Query: 156  KHMNHLLKAPFCVHPKTGRVCVPINPEICDEFDPTNVPTLSK 31
            KHMNHLLKAPFCVHPKTGRVCVPI+P+ C+EFDPT+VPTLSK
Sbjct: 353  KHMNHLLKAPFCVHPKTGRVCVPIDPKSCEEFDPTSVPTLSK 394


>emb|CBI34473.3| unnamed protein product [Vitis vinifera]
          Length = 447

 Score =  613 bits (1581), Expect = e-173
 Identities = 286/342 (83%), Positives = 317/342 (92%), Gaps = 4/342 (1%)
 Frame = -3

Query: 1044 KWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRYQSFKSASELENGIKDKCPFKIDIG 865
            KWMSYGNDG+HPACD+SY GRREFSFTL +DIYLR+QSF S  E+EN IK+KCPFKIDIG
Sbjct: 43   KWMSYGNDGKHPACDQSYIGRREFSFTLADDIYLRFQSFNSVHEMENSIKEKCPFKIDIG 102

Query: 864  PVYSVDPAKRLAYVQSGDNIFTPVERELVFDIDISDYDDARYCCSGADVCLDCWPLMTIA 685
            PVYSVDP KR AY QSGDN+FTPVERELVFDIDI+DYDD RYCCSGADVCLDCWPLMT+A
Sbjct: 103  PVYSVDPTKRHAYAQSGDNVFTPVERELVFDIDITDYDDVRYCCSGADVCLDCWPLMTVA 162

Query: 684  IKVIDTALRDDFGFNHVLWVYSGRRGVHCWVCDGKARRFNNEQRAAVADYFRMYKGNSNS 505
            IKVIDTALRDDFGFNH+LWVYSGRRGVHCWVCDG+ARR +NEQRAA+ADYFR+YKGN NS
Sbjct: 163  IKVIDTALRDDFGFNHILWVYSGRRGVHCWVCDGRARRLSNEQRAAIADYFRVYKGNENS 222

Query: 504  KSKVSLVGPALHPFLVRSYGDVLKDFFEEKLLPSQQLLS-DERYEKILEMIPDESITAEL 328
            + KVSLVGPALHPFL RSY +VLKDFFEEKLLP Q+L S +ERYEKIL++IPDESIT+EL
Sbjct: 223  QKKVSLVGPALHPFLARSYTEVLKDFFEEKLLPGQKLFSTEERYEKILKIIPDESITSEL 282

Query: 327  RGKW--NRRSS-SGKDVNVVRWEQLKHLLQSGKQKAPGIRRCVEEIVFSFTYPRLDMEVS 157
            RGKW  NRRSS S +D+N +RWEQLKH+LQSGKQKA G+RRCVEEIVFS+TYPRLDMEVS
Sbjct: 283  RGKWQENRRSSISKEDINAIRWEQLKHMLQSGKQKAQGLRRCVEEIVFSYTYPRLDMEVS 342

Query: 156  KHMNHLLKAPFCVHPKTGRVCVPINPEICDEFDPTNVPTLSK 31
            KHMNHLLKAPFCVHPKTGRVCVPI+P+ C+EFDPT+VPTLSK
Sbjct: 343  KHMNHLLKAPFCVHPKTGRVCVPIDPKSCEEFDPTSVPTLSK 384


>ref|XP_002515859.1| DNA primase, putative [Ricinus communis] gi|223545014|gb|EEF46528.1|
            DNA primase, putative [Ricinus communis]
          Length = 515

 Score =  587 bits (1514), Expect = e-165
 Identities = 275/342 (80%), Positives = 307/342 (89%), Gaps = 4/342 (1%)
 Frame = -3

Query: 1044 KWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRYQSFKSASELENGIKDKCPFKIDIG 865
            KWM YGNDG+HPACDKSYFGRREFSFTLDNDIYLR+QSF + S+L+  IKDKCPFKIDIG
Sbjct: 42   KWMCYGNDGKHPACDKSYFGRREFSFTLDNDIYLRFQSFNNESQLKTSIKDKCPFKIDIG 101

Query: 864  PVYSVDPAKRLAYVQSGDNIFTPVERELVFDIDISDYDDARYCCSGADVCLDCWPLMTIA 685
            PVY+VDPAKR AY QSGDN+FTPVEREL+FDID+SDYD+ RYCCSGADVCLDCWPLMTIA
Sbjct: 102  PVYTVDPAKRHAYSQSGDNVFTPVERELIFDIDMSDYDNVRYCCSGADVCLDCWPLMTIA 161

Query: 684  IKVIDTALRDDFGFNHVLWVYSGRRGVHCWVCDGKARRFNNEQRAAVADYFRMYKGNSNS 505
            IKVI++ALRDDFGFNH+LWVYSGRRGVHCWVCDGKARR  NEQRAA+ DY R+YKGN NS
Sbjct: 162  IKVINSALRDDFGFNHILWVYSGRRGVHCWVCDGKARRLTNEQRAAIVDYLRVYKGNENS 221

Query: 504  KSKVSLVGPALHPFLVRSYGDVLKDFFEEKLLPSQQLLS-DERYEKILEMIPDESITAEL 328
               VSL GP LHPFLVRSY +VLKDFFE KLL SQ++ S +ERYEKILEMIPDES+T+EL
Sbjct: 222  NKMVSLTGP-LHPFLVRSYAEVLKDFFETKLLSSQEIFSTEERYEKILEMIPDESVTSEL 280

Query: 327  RGKW---NRRSSSGKDVNVVRWEQLKHLLQSGKQKAPGIRRCVEEIVFSFTYPRLDMEVS 157
            RGKW    + SSS + VN+VRWEQLK  LQSG +KAPG+R+CVEEIVFSFTYPRLD+EVS
Sbjct: 281  RGKWQNTKQTSSSKEGVNLVRWEQLKRTLQSGTKKAPGLRKCVEEIVFSFTYPRLDVEVS 340

Query: 156  KHMNHLLKAPFCVHPKTGRVCVPINPEICDEFDPTNVPTLSK 31
            KHMNHLLKAPFC+HPKTGRVCVPI+P+ CDEFDPT VPTLS+
Sbjct: 341  KHMNHLLKAPFCIHPKTGRVCVPIDPKHCDEFDPTAVPTLSQ 382


>ref|XP_003545171.1| PREDICTED: LOW QUALITY PROTEIN: DNA primase small subunit-like
            [Glycine max]
          Length = 435

 Score =  571 bits (1471), Expect = e-160
 Identities = 270/345 (78%), Positives = 302/345 (87%), Gaps = 5/345 (1%)
 Frame = -3

Query: 1044 KWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRYQSFKSASELENGIKDKCPFKIDIG 865
            +W+SYGNDG+HP CD+SY GRREFSFTL+NDIYLR+QSF +A ELEN IK+KCP KIDIG
Sbjct: 29   RWVSYGNDGKHPGCDQSYIGRREFSFTLENDIYLRFQSFHNAHELENSIKEKCPVKIDIG 88

Query: 864  PVYSVDPAKRLAYVQSGDN-IFTPVERELVFDIDISDYDDARYCCSGADVCLDCWPLMTI 688
            PVY+VDPAKR AY QSGDN +F PVEREL+FDID+SDYDD RYCCSGADVCL CWPLMT 
Sbjct: 89   PVYTVDPAKRNAYAQSGDNNVFAPVERELIFDIDMSDYDDVRYCCSGADVCLVCWPLMTT 148

Query: 687  AIKVIDTALRDDFGFNHVLWVYSGRRGVHCWVCDGKARRFNNEQRAAVADYFRMYKGNSN 508
            AIKVIDTALRDDFGF H+LWVYSGRRGVHCWVCDGKARR  NEQR A+ADYFR+YKGN N
Sbjct: 149  AIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNEN 208

Query: 507  SKSKVSLVGPALHPFLVRSYGDVLKDFFEEKLLPSQQLL-SDERYEKILEMIPDESITAE 331
            S  KVSL+G ALHPFL  SY +VLKD+FE+ LL  Q LL ++ERYEKIL MIPDESI +E
Sbjct: 209  SHKKVSLMGAALHPFLATSYTNVLKDYFEKNLLTGQNLLATEERYEKILGMIPDESIASE 268

Query: 330  LRGKW--NRRSSSGK-DVNVVRWEQLKHLLQSGKQKAPGIRRCVEEIVFSFTYPRLDMEV 160
            LRG+W  +RRSSS K D+NVVRWEQ K LLQSGK KA G+RRC+EEIVF FTYPRLDMEV
Sbjct: 269  LRGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCIEEIVFCFTYPRLDMEV 328

Query: 159  SKHMNHLLKAPFCVHPKTGRVCVPINPEICDEFDPTNVPTLSKSV 25
            SKHMNHLLKAPFCVHPKTGRVCVPI+P+ C+EFDPT VPTLS+ +
Sbjct: 329  SKHMNHLLKAPFCVHPKTGRVCVPIDPKRCEEFDPTTVPTLSQLI 373


>ref|XP_003519550.1| PREDICTED: DNA primase small subunit-like [Glycine max]
          Length = 434

 Score =  568 bits (1464), Expect = e-160
 Identities = 269/345 (77%), Positives = 303/345 (87%), Gaps = 5/345 (1%)
 Frame = -3

Query: 1044 KWMSYGNDGRHPACDKSYFGRREFSFTLDNDIYLRYQSFKSASELENGIKDKCPFKIDIG 865
            +W+SYGNDG+HP CD+SY GRREFSFTL+NDIYLR+QSF +A ELEN IK+K P KIDIG
Sbjct: 29   RWVSYGNDGKHPGCDQSYIGRREFSFTLENDIYLRFQSFHNALELENSIKEKTPVKIDIG 88

Query: 864  PVYSVDPAKRLAYVQSGDN-IFTPVERELVFDIDISDYDDARYCCSGADVCLDCWPLMTI 688
            PVY+VDPAKR AY QSGDN +F PVEREL+FDID+SDYDD RYCCSGADVCL CWPLMTI
Sbjct: 89   PVYTVDPAKRNAYAQSGDNNVFAPVERELIFDIDMSDYDDVRYCCSGADVCLVCWPLMTI 148

Query: 687  AIKVIDTALRDDFGFNHVLWVYSGRRGVHCWVCDGKARRFNNEQRAAVADYFRMYKGNSN 508
            AIKVIDTALRDDFGF H+LWVYSGRRGVHCWVCDGKARR  NEQR A+ADYFR+YKGN N
Sbjct: 149  AIKVIDTALRDDFGFKHILWVYSGRRGVHCWVCDGKARRLTNEQRGAIADYFRVYKGNEN 208

Query: 507  SKSKVSLVGPALHPFLVRSYGDVLKDFFEEKLLPSQQLL-SDERYEKILEMIPDESITAE 331
            S  KVSL+G ALHPFL  SY +VLK++FE+ LL  Q LL ++ERYEKIL+MIPDESI +E
Sbjct: 209  SHKKVSLMGAALHPFLATSYTNVLKNYFEKNLLTGQNLLATEERYEKILDMIPDESIASE 268

Query: 330  LRGKW--NRRSSSGK-DVNVVRWEQLKHLLQSGKQKAPGIRRCVEEIVFSFTYPRLDMEV 160
            LRG+W  +RRSSS K D+NVVRWEQ K LLQSGK KA G+RRC+EEIVF FTYPRLDMEV
Sbjct: 269  LRGRWQDSRRSSSAKEDINVVRWEQCKQLLQSGKHKAQGLRRCIEEIVFCFTYPRLDMEV 328

Query: 159  SKHMNHLLKAPFCVHPKTGRVCVPINPEICDEFDPTNVPTLSKSV 25
            SKHMNHLLKAPFCVHPKTGRVCVPI+P+ C+EFDPT VPTLS+ +
Sbjct: 329  SKHMNHLLKAPFCVHPKTGRVCVPIDPKRCEEFDPTTVPTLSQLI 373


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