BLASTX nr result

ID: Atractylodes21_contig00002424 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002424
         (1460 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|2...   143   1e-31
ref|XP_003520115.1| PREDICTED: ninja-family protein AFP2-like [G...   140   6e-31
ref|XP_003516385.1| PREDICTED: ninja-family protein AFP2-like [G...   140   1e-30
ref|XP_002512070.1| RNA binding protein, putative [Ricinus commu...   137   9e-30
emb|CBI27295.3| unnamed protein product [Vitis vinifera]              136   1e-29

>ref|XP_002315001.1| predicted protein [Populus trichocarpa] gi|222864041|gb|EEF01172.1|
            predicted protein [Populus trichocarpa]
          Length = 335

 Score =  143 bits (360), Expect = 1e-31
 Identities = 65/104 (62%), Positives = 82/104 (78%)
 Frame = +1

Query: 994  KQDVGGCSSSSSNPPAGPKRESPAKKQTKEIGSCSMEDMPCVFTQGDGPNGRVIEGILYK 1173
            K+    C +S + P    K+   A+ + +EIG+ +MEDMPCVFT+GDGPNGR ++GILYK
Sbjct: 227  KKIENACRASRTEPENLSKKLDSAENRGREIGTNAMEDMPCVFTKGDGPNGRRVDGILYK 286

Query: 1174 YGRGEQVKIMCVCHGSFLSPAEFVKHAGGTDTVHPLKHIVVKPS 1305
            YG+GE+V+IMCVCHGSF SPAEFVKHAGG+D  HPL+HIVV PS
Sbjct: 287  YGKGEEVRIMCVCHGSFHSPAEFVKHAGGSDVDHPLRHIVVNPS 330



 Score =  103 bits (258), Expect = 9e-20
 Identities = 70/143 (48%), Positives = 80/143 (55%)
 Frame = +1

Query: 298 MENLSIQTNSRFPRDLLQRFTVGTADAGAPRRSDPEEDLGSVSGEEVELNLGLSLGGRFG 477
           ME+LS++ N R+PRDL+QR     A       S+ EE       EE+ELNLGLSLGGRFG
Sbjct: 1   MESLSLEIN-RYPRDLVQRLISSDAQQYKTATSEGEE------AEEIELNLGLSLGGRFG 53

Query: 478 VDKSNTKLMRSSSIAAIXXXXXXXXXXXXXXXXXXSYSGLIRTSSLPVETEEEWRKRKEL 657
           VDK++ KL RSSSIA                    SY  LIRTSSLP ETEEEWRKRKE 
Sbjct: 54  VDKTSEKLTRSSSIAG---SIPLLRDHDALSTPPVSYPFLIRTSSLPTETEEEWRKRKEN 110

Query: 658 QXXXXXXXXXXXXXXQRNLTRGE 726
           Q              Q+NL RGE
Sbjct: 111 QSLRRMEAKRRRSEKQKNL-RGE 132


>ref|XP_003520115.1| PREDICTED: ninja-family protein AFP2-like [Glycine max]
          Length = 411

 Score =  140 bits (354), Expect = 6e-31
 Identities = 65/100 (65%), Positives = 81/100 (81%), Gaps = 2/100 (2%)
 Frame = +1

Query: 1018 SSSSNPPAGPKRESPAKKQT--KEIGSCSMEDMPCVFTQGDGPNGRVIEGILYKYGRGEQ 1191
            +S ++    P R+    ++T  + IG+ SMEDMPCVFT+GDGPNGR IEGILYKYG+GE+
Sbjct: 310  TSKADQGENPSRKHHPSQKTMGRHIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEE 369

Query: 1192 VKIMCVCHGSFLSPAEFVKHAGGTDTVHPLKHIVVKPSSS 1311
            V+IMCVCHG+FLSPAEFVKHAGG D  HPL+HIVV PS++
Sbjct: 370  VRIMCVCHGNFLSPAEFVKHAGGGDVAHPLRHIVVNPSAA 409



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 56/152 (36%), Positives = 74/152 (48%), Gaps = 25/152 (16%)
 Frame = +1

Query: 280 ERTSNEMENLSIQTNSRFPRDLLQRFT---VGTADAGAPRRS------------------ 396
           +    E + +  +   R+PRDLLQ F+   V T   G    +                  
Sbjct: 17  QEEEEEEKKVVCEKMERYPRDLLQGFSLSGVTTVRDGNNNNNNINNNMMHQHHHHHVLHH 76

Query: 397 --DPEEDLGSVSGEEVELNLGLSLGGRFGVDKS--NTKLMRSSSIAAIXXXXXXXXXXXX 564
             + ++    V  EEVELNLGLSLGGRFGVDK+    KL+RSSS+               
Sbjct: 77  HHEQQQQQHEVDDEEVELNLGLSLGGRFGVDKNAKKKKLLRSSSVVG---TMPLFREDDA 133

Query: 565 XXXXXXSYSGLIRTSSLPVETEEEWRKRKELQ 660
                 ++  L+RTSSLP ETEEEWR+RKE+Q
Sbjct: 134 VAPSAAAFPALMRTSSLPTETEEEWRRRKEMQ 165


>ref|XP_003516385.1| PREDICTED: ninja-family protein AFP2-like [Glycine max]
          Length = 407

 Score =  140 bits (352), Expect = 1e-30
 Identities = 67/99 (67%), Positives = 81/99 (81%), Gaps = 1/99 (1%)
 Frame = +1

Query: 1018 SSSSNPPAGPKRESPAKKQT-KEIGSCSMEDMPCVFTQGDGPNGRVIEGILYKYGRGEQV 1194
            + + NP   P    PA+K T + IG+ SMEDMPCVFT+GDGPNGR IEGILYKYG+GE+V
Sbjct: 310  AEAENPSRKPH---PAQKITGRHIGTNSMEDMPCVFTKGDGPNGRRIEGILYKYGKGEEV 366

Query: 1195 KIMCVCHGSFLSPAEFVKHAGGTDTVHPLKHIVVKPSSS 1311
            +IMCVCHG+FLSPAEFVKHAGG D  +PL+HIVV PS++
Sbjct: 367  RIMCVCHGNFLSPAEFVKHAGGGDVAYPLRHIVVNPSAA 405



 Score = 77.8 bits (190), Expect = 7e-12
 Identities = 55/153 (35%), Positives = 73/153 (47%), Gaps = 26/153 (16%)
 Frame = +1

Query: 280 ERTSNEMENLSIQTNSRFPRDLLQRFTVGTADAGAPRRSD-------------------- 399
           +    E + +  +   R+PRDLLQ F++      A  R D                    
Sbjct: 17  QHQQEEEKEVVCEKMERYPRDLLQGFSISGV---ATIRDDNNKINNNNMMQQQHHVLHHH 73

Query: 400 ----PEEDLGSVSGEEVELNLGLSLGGRFGVDKSNTK--LMRSSSIAAIXXXXXXXXXXX 561
                +++      EEVELNLGLSLGGRFGVDK+  K  L+RSSS+              
Sbjct: 74  HEQQQQQEQHEEDDEEVELNLGLSLGGRFGVDKNAKKKRLLRSSSVVGTMPLFRQDDAVA 133

Query: 562 XXXXXXXSYSGLIRTSSLPVETEEEWRKRKELQ 660
                  ++  L+RTSSLP ETEEEWR+RKE+Q
Sbjct: 134 PSAA---AFPALMRTSSLPTETEEEWRRRKEMQ 163


>ref|XP_002512070.1| RNA binding protein, putative [Ricinus communis]
            gi|223549250|gb|EEF50739.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 355

 Score =  137 bits (344), Expect = 9e-30
 Identities = 69/99 (69%), Positives = 78/99 (78%)
 Frame = +1

Query: 1015 SSSSSNPPAGPKRESPAKKQTKEIGSCSMEDMPCVFTQGDGPNGRVIEGILYKYGRGEQV 1194
            +SS  NP    K ES A+ + +EIG   MEDMPCVFT GDGPNGR +EGILYKYG+GE+V
Sbjct: 258  TSSMENPSR--KLES-AEIRGREIGMNPMEDMPCVFTIGDGPNGRKVEGILYKYGKGEEV 314

Query: 1195 KIMCVCHGSFLSPAEFVKHAGGTDTVHPLKHIVVKPSSS 1311
            +IMCVCHGSFLSPAEFVKHAGG D  HPL+HIVV  S S
Sbjct: 315  RIMCVCHGSFLSPAEFVKHAGGRDVDHPLRHIVVNTSGS 353



 Score =  109 bits (273), Expect = 2e-21
 Identities = 73/149 (48%), Positives = 89/149 (59%), Gaps = 2/149 (1%)
 Frame = +1

Query: 286 TSNEMENLSIQTNSRFPRDLLQRFTVGTADAGAPRRSDPEEDLGSVSGEEVELNLGLSLG 465
           +S  ME+LS++ N ++PRDLLQRF   + D+   + S+ EED    + EE+ELNLGLSLG
Sbjct: 14  SSRTMESLSLEIN-KYPRDLLQRFM--SNDSQQLKTSEGEED----NTEEIELNLGLSLG 66

Query: 466 GRFGVDKSNTKLMRSSSIAAIXXXXXXXXXXXXXXXXXXSYSGLIRTSSLPVETEEEWRK 645
           GRFGVDK++ KL RSSSIA                    SY  LIRTSSLP ETEEEWRK
Sbjct: 67  GRFGVDKTSKKLTRSSSIAG--SIPLVRDHDAFNTQPAVSYPLLIRTSSLPTETEEEWRK 124

Query: 646 RKELQXXXXXXXXXXXXXXQR--NLTRGE 726
           RKE+Q              Q+  NL RGE
Sbjct: 125 RKEMQTLRRMEAKRRRSEKQKNLNLNRGE 153


>emb|CBI27295.3| unnamed protein product [Vitis vinifera]
          Length = 353

 Score =  136 bits (343), Expect = 1e-29
 Identities = 69/120 (57%), Positives = 84/120 (70%), Gaps = 13/120 (10%)
 Frame = +1

Query: 991  KKQDVGGCSSSSSNPP-------AGPKRESPAKK------QTKEIGSCSMEDMPCVFTQG 1131
            ++Q +   S SS   P       +G + E+P+K       + +  G   M DMPCVFT+G
Sbjct: 231  QEQSIQEASGSSRTKPNEGTGRTSGAEMENPSKNPGLSENRGRGSGMNFMGDMPCVFTRG 290

Query: 1132 DGPNGRVIEGILYKYGRGEQVKIMCVCHGSFLSPAEFVKHAGGTDTVHPLKHIVVKPSSS 1311
            DGPNGR IEGILYKYG+GE+V+IMCVCHGSFLSPAEFVKHAGG D  HPL+HIVV PSS+
Sbjct: 291  DGPNGRRIEGILYKYGKGEEVRIMCVCHGSFLSPAEFVKHAGGGDVAHPLRHIVVNPSSA 350



 Score = 97.1 bits (240), Expect = 1e-17
 Identities = 64/134 (47%), Positives = 69/134 (51%)
 Frame = +1

Query: 334 PRDLLQRFTVGTADAGAPRRSDPEEDLGSVSGEEVELNLGLSLGGRFGVDKSNTKLMRSS 513
           PRDLLQR    + +          ED      EE+ELNLGLSLGGRFGVDKS  KLMRSS
Sbjct: 5   PRDLLQRLMGNSGEQSQYASMVKGED----DPEEIELNLGLSLGGRFGVDKSEKKLMRSS 60

Query: 514 SIAAIXXXXXXXXXXXXXXXXXXSYSGLIRTSSLPVETEEEWRKRKELQXXXXXXXXXXX 693
           SIA                    SYS L+RTSSLP ET+EEWRKRKELQ           
Sbjct: 61  SIAG---SIGITRDEDALVTPAVSYSSLMRTSSLPTETQEEWRKRKELQTLRRMEAKRRR 117

Query: 694 XXXQRNLTRGERDE 735
              QRN      DE
Sbjct: 118 SEKQRNKEGCVEDE 131


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