BLASTX nr result
ID: Atractylodes21_contig00002338
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Atractylodes21_contig00002338 (255 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001049587.1| Os03g0254700 [Oryza sativa Japonica Group] g... 69 5e-10 ref|XP_003599718.1| WD repeat-containing protein, putative [Medi... 68 9e-10 ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2... 67 1e-09 gb|AAF82145.1|AC034256_9 Strong similarity to an unknown protein... 67 2e-09 ref|XP_003531727.1| PREDICTED: protein TOPLESS-like [Glycine max] 67 2e-09 >ref|NP_001049587.1| Os03g0254700 [Oryza sativa Japonica Group] gi|108707228|gb|ABF95023.1| expressed protein [Oryza sativa Japonica Group] gi|113548058|dbj|BAF11501.1| Os03g0254700 [Oryza sativa Japonica Group] gi|371501280|dbj|BAL44267.1| ASPR1 protein [Oryza sativa Japonica Group] Length = 1133 Score = 68.6 bits (166), Expect = 5e-10 Identities = 37/56 (66%), Positives = 44/56 (78%) Frame = +2 Query: 86 SYDAAPRAPESAKNGDTRSMVDVKPRITKEPTDKA*NWKLTEISESSQCRSLKLPE 253 S +AAP A +A NGD+RS+VDVKPRI EP DK+ WKL EI+ESSQCRSLKL + Sbjct: 715 SGNAAPPAI-TALNGDSRSLVDVKPRIADEPLDKSKVWKLMEITESSQCRSLKLTD 769 >ref|XP_003599718.1| WD repeat-containing protein, putative [Medicago truncatula] gi|357468121|ref|XP_003604345.1| WD repeat-containing protein, putative [Medicago truncatula] gi|355488766|gb|AES69969.1| WD repeat-containing protein, putative [Medicago truncatula] gi|355505400|gb|AES86542.1| WD repeat-containing protein, putative [Medicago truncatula] Length = 1138 Score = 67.8 bits (164), Expect = 9e-10 Identities = 35/57 (61%), Positives = 42/57 (73%) Frame = +2 Query: 83 LSYDAAPRAPESAKNGDTRSMVDVKPRITKEPTDKA*NWKLTEISESSQCRSLKLPE 253 L+ A+ A + NGDTRSM DVKPRI++E DK+ WKLTEI+E S CRSLKLPE Sbjct: 714 LAERASSVAAIAGMNGDTRSMGDVKPRISEEANDKSKIWKLTEINEPSHCRSLKLPE 770 >ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1| predicted protein [Populus trichocarpa] Length = 1126 Score = 67.4 bits (163), Expect = 1e-09 Identities = 32/58 (55%), Positives = 41/58 (70%) Frame = +2 Query: 80 NLSYDAAPRAPESAKNGDTRSMVDVKPRITKEPTDKA*NWKLTEISESSQCRSLKLPE 253 ++ AAP AP N D RS+VDVKP+I E +K+ WKLTEI+E SQCRSL+LP+ Sbjct: 706 SIDNQAAPAAPMVGMNSDNRSLVDVKPKIQDESIEKSRIWKLTEINEPSQCRSLRLPD 763 >gb|AAF82145.1|AC034256_9 Strong similarity to an unknown protein T21F11.18 gi|6730738 from Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains multiple WD PF|00400 domains. ESTs gb|Z34157, gb|AA006273, gb|AA605431, gb|W43588, gb|W43605, gb|Z34559, gb|R90037, gb|AI994125 come from this gene [Arabidopsis thaliana] Length = 1153 Score = 67.0 bits (162), Expect = 2e-09 Identities = 31/43 (72%), Positives = 37/43 (86%) Frame = +2 Query: 125 NGDTRSMVDVKPRITKEPTDKA*NWKLTEISESSQCRSLKLPE 253 NGD+R+MVDVKP IT+E DK+ WKLTE+SE SQCRSL+LPE Sbjct: 744 NGDSRNMVDVKPVITEESNDKSKIWKLTEVSEPSQCRSLRLPE 786 >ref|XP_003531727.1| PREDICTED: protein TOPLESS-like [Glycine max] Length = 1133 Score = 67.0 bits (162), Expect = 2e-09 Identities = 31/43 (72%), Positives = 37/43 (86%) Frame = +2 Query: 125 NGDTRSMVDVKPRITKEPTDKA*NWKLTEISESSQCRSLKLPE 253 NGDTR++ DVKPRI++E DK+ WKLTEI+E SQCRSLKLPE Sbjct: 728 NGDTRNLGDVKPRISEESNDKSKIWKLTEINEQSQCRSLKLPE 770