BLASTX nr result

ID: Atractylodes21_contig00002338 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002338
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001049587.1| Os03g0254700 [Oryza sativa Japonica Group] g...    69   5e-10
ref|XP_003599718.1| WD repeat-containing protein, putative [Medi...    68   9e-10
ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-09
gb|AAF82145.1|AC034256_9 Strong similarity to an unknown protein...    67   2e-09
ref|XP_003531727.1| PREDICTED: protein TOPLESS-like [Glycine max]      67   2e-09

>ref|NP_001049587.1| Os03g0254700 [Oryza sativa Japonica Group]
           gi|108707228|gb|ABF95023.1| expressed protein [Oryza
           sativa Japonica Group] gi|113548058|dbj|BAF11501.1|
           Os03g0254700 [Oryza sativa Japonica Group]
           gi|371501280|dbj|BAL44267.1| ASPR1 protein [Oryza sativa
           Japonica Group]
          Length = 1133

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 37/56 (66%), Positives = 44/56 (78%)
 Frame = +2

Query: 86  SYDAAPRAPESAKNGDTRSMVDVKPRITKEPTDKA*NWKLTEISESSQCRSLKLPE 253
           S +AAP A  +A NGD+RS+VDVKPRI  EP DK+  WKL EI+ESSQCRSLKL +
Sbjct: 715 SGNAAPPAI-TALNGDSRSLVDVKPRIADEPLDKSKVWKLMEITESSQCRSLKLTD 769


>ref|XP_003599718.1| WD repeat-containing protein, putative [Medicago truncatula]
           gi|357468121|ref|XP_003604345.1| WD repeat-containing
           protein, putative [Medicago truncatula]
           gi|355488766|gb|AES69969.1| WD repeat-containing
           protein, putative [Medicago truncatula]
           gi|355505400|gb|AES86542.1| WD repeat-containing
           protein, putative [Medicago truncatula]
          Length = 1138

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 35/57 (61%), Positives = 42/57 (73%)
 Frame = +2

Query: 83  LSYDAAPRAPESAKNGDTRSMVDVKPRITKEPTDKA*NWKLTEISESSQCRSLKLPE 253
           L+  A+  A  +  NGDTRSM DVKPRI++E  DK+  WKLTEI+E S CRSLKLPE
Sbjct: 714 LAERASSVAAIAGMNGDTRSMGDVKPRISEEANDKSKIWKLTEINEPSHCRSLKLPE 770


>ref|XP_002324641.1| predicted protein [Populus trichocarpa] gi|222866075|gb|EEF03206.1|
           predicted protein [Populus trichocarpa]
          Length = 1126

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/58 (55%), Positives = 41/58 (70%)
 Frame = +2

Query: 80  NLSYDAAPRAPESAKNGDTRSMVDVKPRITKEPTDKA*NWKLTEISESSQCRSLKLPE 253
           ++   AAP AP    N D RS+VDVKP+I  E  +K+  WKLTEI+E SQCRSL+LP+
Sbjct: 706 SIDNQAAPAAPMVGMNSDNRSLVDVKPKIQDESIEKSRIWKLTEINEPSQCRSLRLPD 763


>gb|AAF82145.1|AC034256_9 Strong similarity to an unknown protein T21F11.18 gi|6730738 from
           Arabidopsis thaliana BAC T21F11 gb|AC018849 and contains
           multiple WD PF|00400 domains. ESTs gb|Z34157,
           gb|AA006273, gb|AA605431, gb|W43588, gb|W43605,
           gb|Z34559, gb|R90037, gb|AI994125 come from this gene
           [Arabidopsis thaliana]
          Length = 1153

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/43 (72%), Positives = 37/43 (86%)
 Frame = +2

Query: 125 NGDTRSMVDVKPRITKEPTDKA*NWKLTEISESSQCRSLKLPE 253
           NGD+R+MVDVKP IT+E  DK+  WKLTE+SE SQCRSL+LPE
Sbjct: 744 NGDSRNMVDVKPVITEESNDKSKIWKLTEVSEPSQCRSLRLPE 786


>ref|XP_003531727.1| PREDICTED: protein TOPLESS-like [Glycine max]
          Length = 1133

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 31/43 (72%), Positives = 37/43 (86%)
 Frame = +2

Query: 125 NGDTRSMVDVKPRITKEPTDKA*NWKLTEISESSQCRSLKLPE 253
           NGDTR++ DVKPRI++E  DK+  WKLTEI+E SQCRSLKLPE
Sbjct: 728 NGDTRNLGDVKPRISEESNDKSKIWKLTEINEQSQCRSLKLPE 770


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