BLASTX nr result

ID: Atractylodes21_contig00002278 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002278
         (1090 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004136885.1| PREDICTED: SWI/SNF complex component SNF12 h...   169   8e-40
ref|XP_004165363.1| PREDICTED: SWI/SNF complex component SNF12 h...   167   3e-39
ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 h...   167   3e-39
ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 h...   166   9e-39
ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 h...   165   2e-38

>ref|XP_004136885.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
          Length = 560

 Score =  169 bits (429), Expect = 8e-40
 Identities = 83/110 (75%), Positives = 95/110 (86%)
 Frame = +1

Query: 760  PLKTMELTPAARRGKRGPPEKQIPDKVAALLPESALYTQLLEFEGRVDAALTRKKVDIQE 939
            P KTMELTPA RR K   PEKQ+PDKVAALLPESA+YTQLLE EGR+DAAL RKK DIQE
Sbjct: 157  PFKTMELTPAPRRKKVKLPEKQLPDKVAALLPESAIYTQLLEVEGRIDAALARKKNDIQE 216

Query: 940  SIKNPPRVQKMLRIYVFNTFANQSQTGTHKENAEPPSWSLKISGRLLENG 1089
            S+KNPPR+QK LRIYVFNTF NQ+Q+G+ ++N E PSWSLKI GR+LE+G
Sbjct: 217  SLKNPPRIQKTLRIYVFNTFENQNQSGSDQKNVESPSWSLKIIGRILEDG 266


>ref|XP_004165363.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
          Length = 560

 Score =  167 bits (424), Expect = 3e-39
 Identities = 82/110 (74%), Positives = 94/110 (85%)
 Frame = +1

Query: 760  PLKTMELTPAARRGKRGPPEKQIPDKVAALLPESALYTQLLEFEGRVDAALTRKKVDIQE 939
            P KTMELTPA RR K   PEKQ+PDKVAALLPESA+YTQLLE EGR+DAAL RKK DIQE
Sbjct: 157  PFKTMELTPAPRRKKVKLPEKQLPDKVAALLPESAIYTQLLEVEGRIDAALARKKNDIQE 216

Query: 940  SIKNPPRVQKMLRIYVFNTFANQSQTGTHKENAEPPSWSLKISGRLLENG 1089
            S+KNPPR+QK LRIYVFNTF NQ+ +G+ ++N E PSWSLKI GR+LE+G
Sbjct: 217  SLKNPPRIQKTLRIYVFNTFENQNHSGSDQKNVESPSWSLKIIGRILEDG 266


>ref|XP_002279969.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
          Length = 546

 Score =  167 bits (424), Expect = 3e-39
 Identities = 83/110 (75%), Positives = 93/110 (84%)
 Frame = +1

Query: 760  PLKTMELTPAARRGKRGPPEKQIPDKVAALLPESALYTQLLEFEGRVDAALTRKKVDIQE 939
            P KTMELTPAARR K   PEKQIPDK+AAL+PESA+YTQL+E E RVDAAL RKK DIQE
Sbjct: 144  PFKTMELTPAARRKKPKLPEKQIPDKIAALVPESAIYTQLVELEARVDAALARKKTDIQE 203

Query: 940  SIKNPPRVQKMLRIYVFNTFANQSQTGTHKENAEPPSWSLKISGRLLENG 1089
            S+KNP RVQK LRIYVFNTFANQ++    K NAEPPSW+LKI GR+LE+G
Sbjct: 204  SLKNPHRVQKTLRIYVFNTFANQTRMNPEKTNAEPPSWTLKIIGRILEDG 253


>ref|XP_002273749.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Vitis vinifera]
          Length = 548

 Score =  166 bits (420), Expect = 9e-39
 Identities = 82/110 (74%), Positives = 94/110 (85%)
 Frame = +1

Query: 760  PLKTMELTPAARRGKRGPPEKQIPDKVAALLPESALYTQLLEFEGRVDAALTRKKVDIQE 939
            PLK MELTPAARR K+  PEKQ+ D+VAA+LPESALYTQLLEFE RVDAAL RKK+DIQE
Sbjct: 144  PLKVMELTPAARRKKQKLPEKQLQDRVAAILPESALYTQLLEFESRVDAALARKKIDIQE 203

Query: 940  SIKNPPRVQKMLRIYVFNTFANQSQTGTHKENAEPPSWSLKISGRLLENG 1089
            ++KNPP VQK LRIY+FNTFANQ +T   K NAEPP+W+LKI GR+LE G
Sbjct: 204  ALKNPPCVQKTLRIYIFNTFANQIRTIPKKPNAEPPTWTLKIIGRILEEG 253


>ref|XP_004145668.1| PREDICTED: SWI/SNF complex component SNF12 homolog [Cucumis sativus]
            gi|449515744|ref|XP_004164908.1| PREDICTED: SWI/SNF
            complex component SNF12 homolog [Cucumis sativus]
          Length = 547

 Score =  165 bits (418), Expect = 2e-38
 Identities = 82/110 (74%), Positives = 94/110 (85%)
 Frame = +1

Query: 760  PLKTMELTPAARRGKRGPPEKQIPDKVAALLPESALYTQLLEFEGRVDAALTRKKVDIQE 939
            PLKTMELTPAAR+ K+  PEKQ+ DKVAA+LPESALYTQLLEFE RVDAAL RKKVDI E
Sbjct: 143  PLKTMELTPAARKKKQKLPEKQLQDKVAAILPESALYTQLLEFESRVDAALARKKVDIHE 202

Query: 940  SIKNPPRVQKMLRIYVFNTFANQSQTGTHKENAEPPSWSLKISGRLLENG 1089
            ++KNPP +QK LRIYVFNTFANQ  T   K NA+PP+W+LKI GR+LE+G
Sbjct: 203  ALKNPPCIQKTLRIYVFNTFANQVNTIPKKPNADPPTWTLKIIGRILEDG 252


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