BLASTX nr result

ID: Atractylodes21_contig00002272 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002272
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308835.1| predicted protein [Populus trichocarpa] gi|2...   101   6e-20
ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicag...    99   3e-19
ref|XP_003518490.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    97   1e-18
emb|CBI31778.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helica...    96   2e-18

>ref|XP_002308835.1| predicted protein [Populus trichocarpa] gi|222854811|gb|EEE92358.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  101 bits (252), Expect = 6e-20
 Identities = 53/76 (69%), Positives = 61/76 (80%)
 Frame = +3

Query: 3   STQPAGYAVASDPAYDRDGASSSDGLEISNLGISQEIVDALAKKGITKLFPIQKAVLEPA 182
           S   AG AVA   + +  G  S +GLEISNLGIS+EIV++LAKKGITKLFPIQKAVLEPA
Sbjct: 42  SVTQAGIAVADYGSDEEKGKGSEEGLEISNLGISKEIVNSLAKKGITKLFPIQKAVLEPA 101

Query: 183 MQRRDVIGRARTGTGK 230
           MQ +D+ GRARTGTGK
Sbjct: 102 MQGKDMFGRARTGTGK 117


>ref|XP_003617301.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
           gi|355518636|gb|AET00260.1| DEAD-box ATP-dependent RNA
           helicase [Medicago truncatula]
          Length = 802

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 51/76 (67%), Positives = 60/76 (78%)
 Frame = +3

Query: 3   STQPAGYAVASDPAYDRDGASSSDGLEISNLGISQEIVDALAKKGITKLFPIQKAVLEPA 182
           S   AGYA  + P  +   ++S +GLEI+ LGISQ+IV AL KKGITKLFPIQ+AVLEPA
Sbjct: 55  SASRAGYAAEAFPFEEPSKSNSDEGLEIAKLGISQDIVSALEKKGITKLFPIQRAVLEPA 114

Query: 183 MQRRDVIGRARTGTGK 230
           MQ RD+IGRARTGTGK
Sbjct: 115 MQGRDMIGRARTGTGK 130


>ref|XP_003518490.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Glycine
           max]
          Length = 595

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 51/76 (67%), Positives = 59/76 (77%)
 Frame = +3

Query: 3   STQPAGYAVASDPAYDRDGASSSDGLEISNLGISQEIVDALAKKGITKLFPIQKAVLEPA 182
           S   A YAV   P  +    ++ +GLEI+ LGISQ+IV ALAKKGITKLFPIQ+AVLEPA
Sbjct: 63  SCHRAEYAVDDFPYEEGSKGNADEGLEIAKLGISQDIVSALAKKGITKLFPIQRAVLEPA 122

Query: 183 MQRRDVIGRARTGTGK 230
           MQ RD+IGRARTGTGK
Sbjct: 123 MQGRDMIGRARTGTGK 138


>emb|CBI31778.3| unnamed protein product [Vitis vinifera]
          Length = 568

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/72 (69%), Positives = 56/72 (77%)
 Frame = +3

Query: 15  AGYAVASDPAYDRDGASSSDGLEISNLGISQEIVDALAKKGITKLFPIQKAVLEPAMQRR 194
           A YAVA     ++      +GLEIS LGI+QEIV ALA KGITKLFPIQ+AVLEPAMQ R
Sbjct: 94  AEYAVADFSDEEKSSKGGDEGLEISKLGIAQEIVSALANKGITKLFPIQRAVLEPAMQGR 153

Query: 195 DVIGRARTGTGK 230
           D+IGRARTGTGK
Sbjct: 154 DMIGRARTGTGK 165


>ref|XP_002284103.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 53-like [Vitis
           vinifera]
          Length = 666

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/72 (69%), Positives = 56/72 (77%)
 Frame = +3

Query: 15  AGYAVASDPAYDRDGASSSDGLEISNLGISQEIVDALAKKGITKLFPIQKAVLEPAMQRR 194
           A YAVA     ++      +GLEIS LGI+QEIV ALA KGITKLFPIQ+AVLEPAMQ R
Sbjct: 94  AEYAVADFSDEEKSSKGGDEGLEISKLGIAQEIVSALANKGITKLFPIQRAVLEPAMQGR 153

Query: 195 DVIGRARTGTGK 230
           D+IGRARTGTGK
Sbjct: 154 DMIGRARTGTGK 165


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