BLASTX nr result

ID: Atractylodes21_contig00002267 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002267
         (704 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|2...   187   2e-45
ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|2...   185   7e-45
ref|XP_002271242.1| PREDICTED: structure-specific endonuclease s...   181   1e-43
ref|XP_003533500.1| PREDICTED: structure-specific endonuclease s...   175   7e-42

>ref|XP_002298410.1| predicted protein [Populus trichocarpa] gi|222845668|gb|EEE83215.1|
           predicted protein [Populus trichocarpa]
          Length = 177

 Score =  187 bits (475), Expect = 2e-45
 Identities = 103/186 (55%), Positives = 119/186 (63%), Gaps = 23/186 (12%)
 Frame = +3

Query: 81  RLLSTTFPSLK----------------PHSQLPKSTSTKLXXXXXXXXXXLAVQSESTSS 212
           RLLS TF S+K                P S LP+S  T+                 S++S
Sbjct: 3   RLLSKTFRSVKLKASSSKPPPPQQQPSPSSSLPRSRKTRA--------------KSSSNS 48

Query: 213 IHLNWSVYLILSTNPPFKTYVGVTTDFSRRLRQHNGEIKGGAKASQAGRPWICACIIRGF 392
              +WSVYLILSTN P KTYVGVTT+FSRRL+QHNGE+KGGAKAS+AGRPWICACIIRGF
Sbjct: 49  KSRSWSVYLILSTNRPIKTYVGVTTNFSRRLKQHNGELKGGAKASRAGRPWICACIIRGF 108

Query: 393 ESKSEACKFEFKWKNISSKMPRKR-------KSEEGGLHLLQHRNAALNKVKGSSDCSHL 551
             +SEACKFE KWK  S K+PRKR       +S +    LLQHR  AL++VKGS D SHL
Sbjct: 109 NDRSEACKFESKWKIFSRKLPRKRIDDDQMKQSSKDSHRLLQHRKTALDRVKGSFDLSHL 168

Query: 552 EFDWKL 569
           E DWKL
Sbjct: 169 EIDWKL 174


>ref|XP_002298387.1| predicted protein [Populus trichocarpa] gi|222845645|gb|EEE83192.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  187 bits (474), Expect = 2e-45
 Identities = 102/180 (56%), Positives = 118/180 (65%), Gaps = 17/180 (9%)
 Frame = +3

Query: 81  RLLSTTFPSLK----------PHSQLPKSTSTKLXXXXXXXXXXLAVQSESTSSIHLNWS 230
           RLLS TF S+K          P  Q P S+S+                  S++S   +WS
Sbjct: 3   RLLSQTFRSVKLKASSSKPPPPQQQQPSSSSS-------LPRSRKTRAKSSSNSKSRSWS 55

Query: 231 VYLILSTNPPFKTYVGVTTDFSRRLRQHNGEIKGGAKASQAGRPWICACIIRGFESKSEA 410
           VYLILSTN P KTYVGVTT+FSRRL+QHNGE+KGGAKAS+AGRPWICACIIRGF  +SEA
Sbjct: 56  VYLILSTNHPIKTYVGVTTNFSRRLKQHNGELKGGAKASRAGRPWICACIIRGFNDRSEA 115

Query: 411 CKFEFKWKNISSKMPRKR-------KSEEGGLHLLQHRNAALNKVKGSSDCSHLEFDWKL 569
           CKFE KWK+ S K PRKR       +S +    LLQHR  AL++VKGS D SHLE DWKL
Sbjct: 116 CKFESKWKSFSRKFPRKRIDDDQMKQSRKDSHRLLQHRKTALDRVKGSFDLSHLEIDWKL 175


>ref|XP_002298390.1| predicted protein [Populus trichocarpa] gi|222845648|gb|EEE83195.1|
           predicted protein [Populus trichocarpa]
          Length = 178

 Score =  185 bits (470), Expect = 7e-45
 Identities = 101/180 (56%), Positives = 118/180 (65%), Gaps = 17/180 (9%)
 Frame = +3

Query: 81  RLLSTTFPSLK----------PHSQLPKSTSTKLXXXXXXXXXXLAVQSESTSSIHLNWS 230
           RLLS TF S+K          P  Q P S+S+                  S++S   +WS
Sbjct: 3   RLLSQTFRSVKLKASSSKPPPPQQQQPSSSSS-------LPRSRKTRAKSSSNSKSRSWS 55

Query: 231 VYLILSTNPPFKTYVGVTTDFSRRLRQHNGEIKGGAKASQAGRPWICACIIRGFESKSEA 410
           VYLILSTN P KTYVGVTT+FSRRL+QHNG++KGGAKAS+AGRPWICACIIRGF  +SEA
Sbjct: 56  VYLILSTNHPIKTYVGVTTNFSRRLKQHNGKLKGGAKASRAGRPWICACIIRGFNDRSEA 115

Query: 411 CKFEFKWKNISSKMPRKR-------KSEEGGLHLLQHRNAALNKVKGSSDCSHLEFDWKL 569
           CKFE KWK+ S K PRKR       +S +    LLQHR  AL++VKGS D SHLE DWKL
Sbjct: 116 CKFESKWKSFSRKFPRKRIDDDQMKQSRKDSHRLLQHRKTALDRVKGSFDLSHLEIDWKL 175


>ref|XP_002271242.1| PREDICTED: structure-specific endonuclease subunit slx1 [Vitis
           vinifera] gi|296085104|emb|CBI28599.3| unnamed protein
           product [Vitis vinifera]
          Length = 160

 Score =  181 bits (460), Expect = 1e-43
 Identities = 86/133 (64%), Positives = 102/133 (76%), Gaps = 5/133 (3%)
 Frame = +3

Query: 195 SESTSSIHLNWSVYLILSTNPPFKTYVGVTTDFSRRLRQHNGEIKGGAKASQAGRPWICA 374
           S S S    +W VYLILSTN P KTYVGVTT+FSRRL+QHNGE+KGGAKAS+ GRPW+CA
Sbjct: 28  SSSRSRSSFSWLVYLILSTNTPIKTYVGVTTNFSRRLKQHNGELKGGAKASRTGRPWVCA 87

Query: 375 CIIRGFESKSEACKFEFKWKNISSKMPRKRKS-----EEGGLHLLQHRNAALNKVKGSSD 539
           CII+GF+ KSEAC+FE KWK+ S K+PRKR       +   L LLQHR AALN+VKGS  
Sbjct: 88  CIIQGFKDKSEACQFESKWKSFSRKLPRKRNDTVRQVDNDSLLLLQHREAALNRVKGSLV 147

Query: 540 CSHLEFDWKLEPN 578
           C HLE +W+L P+
Sbjct: 148 CDHLEINWQLNPS 160


>ref|XP_003533500.1| PREDICTED: structure-specific endonuclease subunit slx1-like
           [Glycine max]
          Length = 172

 Score =  175 bits (444), Expect = 7e-42
 Identities = 95/171 (55%), Positives = 114/171 (66%), Gaps = 8/171 (4%)
 Frame = +3

Query: 87  LSTTFPSLKPHSQLPK-STSTKLXXXXXXXXXXLAVQSESTSSIHLNWSVYLILSTNPPF 263
           LST F S+K  +  PK S S+               +SES S    +WSVYLILSTN P 
Sbjct: 4   LSTQFRSIKRPNSNPKLSKSSSPTKSEIKFNAKPKPKSESESE---SWSVYLILSTNHPI 60

Query: 264 KTYVGVTTDFSRRLRQHNGEIKGGAKASQAGRPWICACIIRGFESKSEACKFEFKWKNIS 443
           KTYVG+T +F RRL+QHNGE+KGGAKAS+AGRPWICACII GF  +SEA  FE KWK  S
Sbjct: 61  KTYVGITNNFPRRLKQHNGELKGGAKASRAGRPWICACIICGFTDRSEASVFESKWKTFS 120

Query: 444 SKMPRK-------RKSEEGGLHLLQHRNAALNKVKGSSDCSHLEFDWKLEP 575
            + PRK       ++SE+  L LL+HR AALN+VKGS DC+HLE  W L+P
Sbjct: 121 RRAPRKNQNDNLSKQSEDSSLPLLRHRQAALNRVKGSLDCAHLEIIWHLDP 171


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