BLASTX nr result

ID: Atractylodes21_contig00002262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002262
         (687 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002892424.1| T6D22.2 [Arabidopsis lyrata subsp. lyrata] g...   403   e-110
gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thaliana]               399   e-109
gb|AAX54511.1| elongation factor 1 alpha [Actinidia deliciosa]        399   e-109
gb|ABA12217.1| translation elongation factor 1A-1 [Gossypium hir...   399   e-109
gb|ABA12220.1| translation elongation factor 1A-4 [Gossypium hir...   399   e-109

>ref|XP_002892424.1| T6D22.2 [Arabidopsis lyrata subsp. lyrata]
            gi|297338266|gb|EFH68683.1| T6D22.2 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 951

 Score =  403 bits (1036), Expect = e-110
 Identities = 202/226 (89%), Positives = 210/226 (92%), Gaps = 4/226 (1%)
 Frame = -3

Query: 667  SSSLRCSST-LFDQKRLLH*ANNLC*T---MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 500
            S S RCS   + D+ R++H ++ +  T   MGKEK HINIVVIGHVDSGKSTTTGHLIYK
Sbjct: 473  SPSERCSRNWVLDRSRIIHLSSAILITRVTMGKEKFHINIVVIGHVDSGKSTTTGHLIYK 532

Query: 499  LGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETNKYYCTVI 320
            LGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFET KYYCTVI
Sbjct: 533  LGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCTVI 592

Query: 319  DAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMIC 140
            DAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMIC
Sbjct: 593  DAPGHRDFIKNMITGTSQADCAVLIIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMIC 652

Query: 139  CCNKMDATTPKYSKARYDEIVKEVSSYLKKVGYNPDKIPFVPISGF 2
            CCNKMDATTPKYSKARYDEI+KEVSSYLKKVGYNPDKIPFVPISGF
Sbjct: 653  CCNKMDATTPKYSKARYDEIIKEVSSYLKKVGYNPDKIPFVPISGF 698



 Score =  395 bits (1015), Expect = e-108
 Identities = 192/196 (97%), Positives = 194/196 (98%)
 Frame = -3

Query: 589 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 410
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 409 DKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 230
           DKLKAERERGITIDIALWKFET KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 229 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 50
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTP+YSKARYDEI+KEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPRYSKARYDEIIKEVSSYLKK 180

Query: 49  VGYNPDKIPFVPISGF 2
           VGYNPDKIPFVPISGF
Sbjct: 181 VGYNPDKIPFVPISGF 196


>gb|AAF79822.1|AC026875_2 T6D22.2 [Arabidopsis thaliana]
          Length = 967

 Score =  399 bits (1025), Expect = e-109
 Identities = 195/202 (96%), Positives = 197/202 (97%)
 Frame = -3

Query: 607  NNLC*TMGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF 428
            +N   TMGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF
Sbjct: 513  HNFVLTMGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSF 572

Query: 427  KYAWVLDKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVL 248
            KYAWVLDKLKAERERGITIDIALWKFET KYYCTVIDAPGHRDFIKNMITGTSQADCAVL
Sbjct: 573  KYAWVLDKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVL 632

Query: 247  IIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEV 68
            IIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI+KEV
Sbjct: 633  IIDSTTGGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEV 692

Query: 67   SSYLKKVGYNPDKIPFVPISGF 2
            SSYLKKVGYNPDKIPFVPISGF
Sbjct: 693  SSYLKKVGYNPDKIPFVPISGF 714



 Score =  396 bits (1018), Expect = e-108
 Identities = 193/196 (98%), Positives = 194/196 (98%)
 Frame = -3

Query: 589 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 410
           MGKEK HINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKFHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 409 DKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 230
           DKLKAERERGITIDIALWKFET KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 229 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 50
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEI+KEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIIKEVSSYLKK 180

Query: 49  VGYNPDKIPFVPISGF 2
           VGYNPDKIPFVPISGF
Sbjct: 181 VGYNPDKIPFVPISGF 196


>gb|AAX54511.1| elongation factor 1 alpha [Actinidia deliciosa]
          Length = 447

 Score =  399 bits (1024), Expect = e-109
 Identities = 195/196 (99%), Positives = 195/196 (99%)
 Frame = -3

Query: 589 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 410
           MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 409 DKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 230
           DKLKAERERGITIDIALWKFET KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 229 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 50
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 49  VGYNPDKIPFVPISGF 2
           VGYNPDKIPFVPISGF
Sbjct: 181 VGYNPDKIPFVPISGF 196


>gb|ABA12217.1| translation elongation factor 1A-1 [Gossypium hirsutum]
          Length = 447

 Score =  399 bits (1024), Expect = e-109
 Identities = 195/196 (99%), Positives = 195/196 (99%)
 Frame = -3

Query: 589 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 410
           MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 409 DKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 230
           DKLKAERERGITIDIALWKFET KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 229 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 50
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 49  VGYNPDKIPFVPISGF 2
           VGYNPDKIPFVPISGF
Sbjct: 181 VGYNPDKIPFVPISGF 196


>gb|ABA12220.1| translation elongation factor 1A-4 [Gossypium hirsutum]
          Length = 447

 Score =  399 bits (1024), Expect = e-109
 Identities = 195/196 (99%), Positives = 195/196 (99%)
 Frame = -3

Query: 589 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 410
           MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL
Sbjct: 1   MGKEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVL 60

Query: 409 DKLKAERERGITIDIALWKFETNKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 230
           DKLKAERERGITIDIALWKFET KYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT
Sbjct: 61  DKLKAERERGITIDIALWKFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLIIDSTT 120

Query: 229 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 50
           GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK
Sbjct: 121 GGFEAGISKDGQTREHALLAFTLGVKQMICCCNKMDATTPKYSKARYDEIVKEVSSYLKK 180

Query: 49  VGYNPDKIPFVPISGF 2
           VGYNPDKIPFVPISGF
Sbjct: 181 VGYNPDKIPFVPISGF 196


Top