BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002198
         (1022 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containi...   286   4e-75
ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containi...   286   4e-75
ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containi...   277   3e-72
ref|XP_002523877.1| pentatricopeptide repeat-containing protein,...   261   1e-67
ref|XP_003596871.1| Pentatricopeptide repeat-containing protein ...   256   5e-66

>ref|XP_003543417.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g03540-like [Glycine max]
          Length = 315

 Score =  286 bits (733), Expect = 4e-75
 Identities = 142/254 (55%), Positives = 184/254 (72%)
 Frame = -1

Query: 767 HQGIPFFSTLLESCSSTRNLRKLKQVHGXXXXXXXXXXXXXRAKLVSSYSACAQLLEACI 588
           H+ +PF++TLL++CSS+++L+ LK++H              R+KLVSSY+ CAQL EA I
Sbjct: 5   HKLVPFYATLLDACSSSKHLKNLKRIHALTITLGISRNDFIRSKLVSSYACCAQLHEANI 64

Query: 587 IFSFTNRQSTFLYNSLIRGXXXXXXXXXXXXXFREMLRAGKPLDRHTLPTVLKSCAGVPD 408
           +FSFT RQ TFL+NSLIR              FR+ML A KP DRHTLP VLKSCAG+  
Sbjct: 65  LFSFTIRQPTFLFNSLIRAYSSLNLFSQSLCIFRQMLLARKPFDRHTLPVVLKSCAGLSA 124

Query: 407 LRLGRNVHVLVFSNGFDADVANSNSLMTMYSKCGDLGSAQKVFDEMSKRDVVTWSAMLSG 228
           LRLG+ VH  V  NGF  D+ANSN+L+ MYSKCG L  A+K+FD M +R+ +T+S M++G
Sbjct: 125 LRLGQQVHGAVLVNGFGLDLANSNALINMYSKCGHLVYARKLFDRMWQRNEITFSTMMAG 184

Query: 227 VGSYGKCEEVFELFERMVSDGVEPDGLTFTAVLTACSHRGLVDKGHEYFQMMQDRFGLRP 48
            G +GKC EVFELF++MV  G  PDG+TFTAVL+ACSH G +DKG EY +MM+ RFG++P
Sbjct: 185 YGMHGKCGEVFELFDKMVEAGERPDGVTFTAVLSACSHGGFIDKGREYLKMMEVRFGVKP 244

Query: 47  GLEHCTCIIDMLGR 6
           GL H TC++DMLGR
Sbjct: 245 GLHHYTCMVDMLGR 258


>ref|XP_002274172.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 313

 Score =  286 bits (733), Expect = 4e-75
 Identities = 144/258 (55%), Positives = 187/258 (72%)
 Frame = -1

Query: 776 MPRHQGIPFFSTLLESCSSTRNLRKLKQVHGXXXXXXXXXXXXXRAKLVSSYSACAQLLE 597
           MP H+ IP F+TLL+SC+S R+L+KLKQ+H              RAKLV+SY++CAQ+ +
Sbjct: 1   MPAHKHIPSFATLLDSCASKRDLQKLKQIHARIITVGISRHDFIRAKLVASYASCAQMSQ 60

Query: 596 ACIIFSFTNRQSTFLYNSLIRGXXXXXXXXXXXXXFREMLRAGKPLDRHTLPTVLKSCAG 417
           A  IFS TNR+ TFLYNSLIRG             F +ML A KP+D +TLP VLKSC+G
Sbjct: 61  ASYIFSLTNRRPTFLYNSLIRGYSSLFLFSQSLSIFCQMLFAHKPIDCYTLPAVLKSCSG 120

Query: 416 VPDLRLGRNVHVLVFSNGFDADVANSNSLMTMYSKCGDLGSAQKVFDEMSKRDVVTWSAM 237
           +  LRLGR VH  V +NG  +D+A  N+L++MYSKCGDL +A+KVFD M++R++VTWSAM
Sbjct: 121 LSALRLGRQVHCAVVANGLASDLATINALISMYSKCGDLAAARKVFDRMTERNLVTWSAM 180

Query: 236 LSGVGSYGKCEEVFELFERMVSDGVEPDGLTFTAVLTACSHRGLVDKGHEYFQMMQDRFG 57
           ++G G +G   EVFELF+ MV  G  PDG+TFTAVL ACSH G ++ G +YF MM++RFG
Sbjct: 181 MAGYGVHGVFGEVFELFDGMVDAGEVPDGVTFTAVLAACSHGGFMENGRKYFGMMEERFG 240

Query: 56  LRPGLEHCTCIIDMLGRA 3
           +RP LEH TC++DMLGRA
Sbjct: 241 VRPRLEHYTCMVDMLGRA 258


>ref|XP_004144516.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449515851|ref|XP_004164961.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 308

 Score =  277 bits (708), Expect = 3e-72
 Identities = 139/259 (53%), Positives = 181/259 (69%), Gaps = 1/259 (0%)
 Frame = -1

Query: 776 MPR-HQGIPFFSTLLESCSSTRNLRKLKQVHGXXXXXXXXXXXXXRAKLVSSYSACAQLL 600
           MP+ H+ IPF++ LL++CSST NL  LKQ+H              R KL S+Y+ACAQL 
Sbjct: 1   MPKPHEIIPFYAALLDACSSTNNLHTLKQIHALTITLHISHHHFIRTKLASTYAACAQLP 60

Query: 599 EACIIFSFTNRQSTFLYNSLIRGXXXXXXXXXXXXXFREMLRAGKPLDRHTLPTVLKSCA 420
           +A  IFSF  R+ T+L+N+LIR              FR ML +GK +DRHTLP VLKSC 
Sbjct: 61  QATTIFSFATRRPTYLFNTLIRAHSSLRLFSQSLSIFRHMLLSGKSIDRHTLPPVLKSCT 120

Query: 419 GVPDLRLGRNVHVLVFSNGFDADVANSNSLMTMYSKCGDLGSAQKVFDEMSKRDVVTWSA 240
           G+  LRLGR VH  +  NGF AD+ + N+L+TMY KCGDLG A+KVFD M +R+ V+WSA
Sbjct: 121 GLSSLRLGRQVHGALLINGFSADLPSLNALITMYGKCGDLGVARKVFDGMPERNEVSWSA 180

Query: 239 MLSGVGSYGKCEEVFELFERMVSDGVEPDGLTFTAVLTACSHRGLVDKGHEYFQMMQDRF 60
           +++G G +G   EVF LFERMV +G +PD LTFT++LTACSH GL++KG EYF MM+  F
Sbjct: 181 LMAGYGVHGMFGEVFRLFERMVEEGQKPDELTFTSLLTACSHGGLIEKGKEYFGMMRMEF 240

Query: 59  GLRPGLEHCTCIIDMLGRA 3
            LRPGL+H TC++D+LGR+
Sbjct: 241 HLRPGLQHYTCMVDLLGRS 259


>ref|XP_002523877.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223536965|gb|EEF38603.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 302

 Score =  261 bits (668), Expect = 1e-67
 Identities = 127/252 (50%), Positives = 176/252 (69%)
 Frame = -1

Query: 758 IPFFSTLLESCSSTRNLRKLKQVHGXXXXXXXXXXXXXRAKLVSSYSACAQLLEACIIFS 579
           IP +++L+++C +T+N   L Q+H              R+KLVS+Y++C Q+ +A ++FS
Sbjct: 4   IPLYASLIDACITTKNFTTLIQIHAQTITNGIYHRDFIRSKLVSAYASCTQMRQAALLFS 63

Query: 578 FTNRQSTFLYNSLIRGXXXXXXXXXXXXXFREMLRAGKPLDRHTLPTVLKSCAGVPDLRL 399
           FTNRQ+TFL+NSLIR              FR ML A KP+DRHTLP+VLKSCAG+  +RL
Sbjct: 64  FTNRQTTFLFNSLIRAYASLNLFSHSLSFFRRMLDACKPIDRHTLPSVLKSCAGLSAVRL 123

Query: 398 GRNVHVLVFSNGFDADVANSNSLMTMYSKCGDLGSAQKVFDEMSKRDVVTWSAMLSGVGS 219
           G+ VH ++  NG   D+ANSN+L+ MY+KCG+L  A+KVFD M  R+ V+W+ M++G G 
Sbjct: 124 GQQVHGILLINGLAFDLANSNALINMYAKCGNLAGARKVFDRMPARNEVSWATMMAGYGM 183

Query: 218 YGKCEEVFELFERMVSDGVEPDGLTFTAVLTACSHRGLVDKGHEYFQMMQDRFGLRPGLE 39
           +GK  EV  LF RMV +G   D +  TAVL+ACSH G+V+KG EYF MM++RFG++P LE
Sbjct: 184 HGKGGEVLVLFNRMVEEGSSVDAVCLTAVLSACSHGGMVEKGAEYFGMMEERFGVKPSLE 243

Query: 38  HCTCIIDMLGRA 3
           H TC++DMLGRA
Sbjct: 244 HYTCMVDMLGRA 255


>ref|XP_003596871.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124359886|gb|ABD32760.2| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355485919|gb|AES67122.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 316

 Score =  256 bits (655), Expect = 5e-66
 Identities = 130/254 (51%), Positives = 170/254 (66%)
 Frame = -1

Query: 767 HQGIPFFSTLLESCSSTRNLRKLKQVHGXXXXXXXXXXXXXRAKLVSSYSACAQLLEACI 588
           H+  P ++TLL  C S++N+  LK +H              R KLVS Y++C++L +A I
Sbjct: 5   HELKPLYATLLNKCFSSKNINSLKIIHARTIRLGISHDDFIRTKLVSCYASCSKLHQANI 64

Query: 587 IFSFTNRQSTFLYNSLIRGXXXXXXXXXXXXXFREMLRAGKPLDRHTLPTVLKSCAGVPD 408
           +FSFTNR+ TFLYNSLIR              FREM  + KP D HTLP VLKSCAG+  
Sbjct: 65  LFSFTNRKPTFLYNSLIRAYLSLNLFKETLSIFREMRLSYKPFDCHTLPLVLKSCAGLSA 124

Query: 407 LRLGRNVHVLVFSNGFDADVANSNSLMTMYSKCGDLGSAQKVFDEMSKRDVVTWSAMLSG 228
           LRLG+ VH  V  NGF  D+ NSN+L+ MY+KCG+L  A+KVFD M +R+ VTWS M++G
Sbjct: 125 LRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGMCERNEVTWSTMMAG 184

Query: 227 VGSYGKCEEVFELFERMVSDGVEPDGLTFTAVLTACSHRGLVDKGHEYFQMMQDRFGLRP 48
            G +G+ EEVFE+F RMV  G   D ++FT VLTACSH G V+KG E F+MM+ RFG++P
Sbjct: 185 YGMHGRFEEVFEMFNRMVEVGERMDNVSFTVVLTACSHGGFVEKGREIFEMMKVRFGVKP 244

Query: 47  GLEHCTCIIDMLGR 6
            + H TC++DMLGR
Sbjct: 245 DVRHYTCMVDMLGR 258