BLASTX nr result

ID: Atractylodes21_contig00002181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002181
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305718.1| predicted protein [Populus trichocarpa] gi|2...   167   6e-40
ref|XP_002532971.1| mitochondrial ribosomal protein L24, putativ...   166   1e-39
gb|AFK48729.1| unknown [Medicago truncatula]                          163   2e-38
ref|NP_680212.1| 50S ribosomal protein L24-like protein [Arabido...   162   2e-38
gb|ACF72672.1| ribosomal protein L24 [Cucumis melo var. cantalup...   160   8e-38

>ref|XP_002305718.1| predicted protein [Populus trichocarpa] gi|222848682|gb|EEE86229.1|
           predicted protein [Populus trichocarpa]
          Length = 159

 Score =  167 bits (424), Expect = 6e-40
 Identities = 79/91 (86%), Positives = 86/91 (94%)
 Frame = -1

Query: 472 TVEAPLHVSNVQIVDPVTGRPCKVGIRYQEDGTKVRVSRGIGASGSIIPRPEILKIRATP 293
           TVEAPLH SNVQ+VDPVTGRPCKVGIRY EDGTKVRVSRG G+SGSIIPRPEILKIR TP
Sbjct: 69  TVEAPLHASNVQVVDPVTGRPCKVGIRYLEDGTKVRVSRGEGSSGSIIPRPEILKIRTTP 128

Query: 292 RPTIAGPKDTPIELVLEKTYDGKSGKGMPDL 200
           RPT+AGPKDTP++LVL+KTYD K+GKGMPDL
Sbjct: 129 RPTVAGPKDTPMDLVLKKTYDAKTGKGMPDL 159


>ref|XP_002532971.1| mitochondrial ribosomal protein L24, putative [Ricinus communis]
           gi|223527249|gb|EEF29408.1| mitochondrial ribosomal
           protein L24, putative [Ricinus communis]
          Length = 159

 Score =  166 bits (421), Expect = 1e-39
 Identities = 79/91 (86%), Positives = 85/91 (93%)
 Frame = -1

Query: 472 TVEAPLHVSNVQIVDPVTGRPCKVGIRYQEDGTKVRVSRGIGASGSIIPRPEILKIRATP 293
           TVEAPLH SNVQ++DPVTG+PCKVG RY EDGTKVRVSRGIGASGSIIPRPEILKIR TP
Sbjct: 69  TVEAPLHASNVQVLDPVTGKPCKVGYRYLEDGTKVRVSRGIGASGSIIPRPEILKIRTTP 128

Query: 292 RPTIAGPKDTPIELVLEKTYDGKSGKGMPDL 200
           RPT AGPKDTPI+LVLE+TYD K+GKGMPDL
Sbjct: 129 RPTEAGPKDTPIDLVLERTYDAKTGKGMPDL 159


>gb|AFK48729.1| unknown [Medicago truncatula]
          Length = 159

 Score =  163 bits (412), Expect = 2e-38
 Identities = 74/91 (81%), Positives = 86/91 (94%)
 Frame = -1

Query: 472 TVEAPLHVSNVQIVDPVTGRPCKVGIRYQEDGTKVRVSRGIGASGSIIPRPEILKIRATP 293
           TVEAP+H SNVQ++DPVTG+PCKVG +Y EDGTKVRVSRGIGASGSIIPRPEILKIR TP
Sbjct: 69  TVEAPIHASNVQVLDPVTGKPCKVGTKYLEDGTKVRVSRGIGASGSIIPRPEILKIRTTP 128

Query: 292 RPTIAGPKDTPIELVLEKTYDGKSGKGMPDL 200
           RP++AGPKDTP+E+VLEKTYD K+G+GMP+L
Sbjct: 129 RPSVAGPKDTPMEIVLEKTYDSKTGRGMPEL 159


>ref|NP_680212.1| 50S ribosomal protein L24-like protein [Arabidopsis thaliana]
           gi|297808355|ref|XP_002872061.1| KOW domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|8809706|dbj|BAA97247.1| 50S ribosomal protein L24
           [Arabidopsis thaliana] gi|44681334|gb|AAS47607.1|
           At5g23535 [Arabidopsis thaliana]
           gi|45773844|gb|AAS76726.1| At5g23535 [Arabidopsis
           thaliana] gi|110735795|dbj|BAE99874.1| 50S ribosomal
           protein L24 [Arabidopsis thaliana]
           gi|297317898|gb|EFH48320.1| KOW domain-containing
           protein [Arabidopsis lyrata subsp. lyrata]
           gi|332005797|gb|AED93180.1| 50S ribosomal protein
           L24-like protein [Arabidopsis thaliana]
          Length = 159

 Score =  162 bits (411), Expect = 2e-38
 Identities = 76/91 (83%), Positives = 83/91 (91%)
 Frame = -1

Query: 472 TVEAPLHVSNVQIVDPVTGRPCKVGIRYQEDGTKVRVSRGIGASGSIIPRPEILKIRATP 293
           TVEAPLH SNVQ+VDPVTGRPCKVG++Y EDGTKVRV+RG G SGSIIPRPEILKIRATP
Sbjct: 69  TVEAPLHASNVQVVDPVTGRPCKVGVKYLEDGTKVRVARGTGTSGSIIPRPEILKIRATP 128

Query: 292 RPTIAGPKDTPIELVLEKTYDGKSGKGMPDL 200
           RPT AGPKDTP+E V E+TYD K+GKGMPDL
Sbjct: 129 RPTTAGPKDTPMEFVWEQTYDAKTGKGMPDL 159


>gb|ACF72672.1| ribosomal protein L24 [Cucumis melo var. cantalupensis]
          Length = 159

 Score =  160 bits (406), Expect = 8e-38
 Identities = 74/91 (81%), Positives = 86/91 (94%)
 Frame = -1

Query: 472 TVEAPLHVSNVQIVDPVTGRPCKVGIRYQEDGTKVRVSRGIGASGSIIPRPEILKIRATP 293
           TVEAPLHVSNVQ++DPVTG+PCKVG RY EDG+KVRVSRG+ ASGSIIPRPEILKIR +P
Sbjct: 69  TVEAPLHVSNVQVIDPVTGKPCKVGYRYLEDGSKVRVSRGLEASGSIIPRPEILKIRTSP 128

Query: 292 RPTIAGPKDTPIELVLEKTYDGKSGKGMPDL 200
           RPT+AGPKDTP+++VLEKTYD K+GKGMP+L
Sbjct: 129 RPTVAGPKDTPMDVVLEKTYDPKTGKGMPEL 159


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