BLASTX nr result

ID: Atractylodes21_contig00002018 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00002018
         (1930 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycin...   243   2e-61
ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|2...   236   1e-59
ref|XP_002270881.1| PREDICTED: F-box protein SKIP31 [Vitis vinif...   235   3e-59
ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycin...   234   8e-59
gb|ACU22738.1| unknown [Glycine max]                                  234   8e-59

>ref|XP_003517102.1| PREDICTED: F-box protein SKIP31-like [Glycine max]
          Length = 324

 Score =  243 bits (619), Expect = 2e-61
 Identities = 114/142 (80%), Positives = 126/142 (88%)
 Frame = +3

Query: 858  LKDDWMILDKSVADQVSIWKSNKGLTDKVFSDHACSGETCSYYQIGDVFVCENTGYVHVC 1037
            LKDD +ILDK++ADQVS WKS++GL+D V +DHACSGETCSYY IGDVF+CE TG VHVC
Sbjct: 184  LKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQVHVC 243

Query: 1038 DDTCKEDVLDPENELLVCTISGHCFDRLLSPSEIAGDMEEQQEGGVTDEAEPFMGSGRFA 1217
            DDTC+E V+DP NELLVCTISGHCFDRLLSPSE+  D  EQQ+GGVTDEAEPFMGSGRFA
Sbjct: 244  DDTCREVVMDPTNELLVCTISGHCFDRLLSPSEMEPD-TEQQQGGVTDEAEPFMGSGRFA 302

Query: 1218 RAYQLGYNCEDEKELEACLRFC 1283
            RAY LGYNC DEKELEA LRFC
Sbjct: 303  RAYSLGYNCADEKELEATLRFC 324



 Score =  226 bits (576), Expect = 2e-56
 Identities = 116/197 (58%), Positives = 136/197 (69%)
 Frame = +1

Query: 139 MTFSEDEDENLANYLESEVLCEISDQXXXXXXXXXXRQPKRLRVDDRDGEVXXXXXXXXX 318
           MT S+DEDENLA +LESEVL E+SD+           +PK  R    + E+         
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEENV-----EEPKAKRARLEEDEITKQKQSSDS 55

Query: 319 XXXXXXXXXDDRDGEVNNRGTVPKRVDDGFFSTIPPELFPHILKFLSSEDLVACSLVCRF 498
                          V N G VP+R++ G+FS IPPELF HILKFLSSEDLV+CSLVCRF
Sbjct: 56  LSAPKNI--------VVNNGVVPRRIETGYFSQIPPELFHHILKFLSSEDLVSCSLVCRF 107

Query: 499 LNFASSDESLWRRLYCMRWGILPPTKKLRDRAWKKLYIQRDEEDMVEFVRDCPSEFKEYY 678
           LN+A+SDE+LWRRLYCMRWG+LPPT+KLR+  WK LYIQRD EDMVE VR C +EFKEYY
Sbjct: 108 LNYAASDEALWRRLYCMRWGMLPPTRKLRECPWKMLYIQRDGEDMVELVRSCQNEFKEYY 167

Query: 679 IQMQVAKRSQTPLPSQI 729
           IQMQ AKRSQ P PSQ+
Sbjct: 168 IQMQAAKRSQAPHPSQL 184


>ref|XP_002328850.1| predicted protein [Populus trichocarpa] gi|222839148|gb|EEE77499.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  236 bits (603), Expect = 1e-59
 Identities = 108/142 (76%), Positives = 126/142 (88%)
 Frame = +3

Query: 858  LKDDWMILDKSVADQVSIWKSNKGLTDKVFSDHACSGETCSYYQIGDVFVCENTGYVHVC 1037
            +KDD +ILDK++ADQVS WKS +GLTDKV +DHACSGETCSY+++GDVFVCE TG VHVC
Sbjct: 190  VKDDRIILDKTIADQVSTWKSRRGLTDKVVTDHACSGETCSYFKLGDVFVCEKTGNVHVC 249

Query: 1038 DDTCKEDVLDPENELLVCTISGHCFDRLLSPSEIAGDMEEQQEGGVTDEAEPFMGSGRFA 1217
            DDTC+E ++DP NELLVCTISGHCFDR L PSE+  D  +QQ+GG+TDEAEPFMGSGRFA
Sbjct: 250  DDTCREVIMDPTNELLVCTISGHCFDRWLLPSEMEPD-PDQQQGGLTDEAEPFMGSGRFA 308

Query: 1218 RAYQLGYNCEDEKELEACLRFC 1283
            RAY LGYNC+D+KELEA LRFC
Sbjct: 309  RAYLLGYNCDDDKELEAALRFC 330



 Score =  221 bits (564), Expect = 4e-55
 Identities = 116/203 (57%), Positives = 135/203 (66%), Gaps = 6/203 (2%)
 Frame = +1

Query: 139 MTFSEDEDENLANYLESEVLCEISDQXXXXXXXXXXRQP------KRLRVDDRDGEVXXX 300
           MT S++EDE LA +LESEVL E+SDQ          ++       KR+R  +   E    
Sbjct: 1   MTISDEEDEILAKFLESEVLSEVSDQDQEEEETEEAKKEEDEPKFKRVRFQETQEE---- 56

Query: 301 XXXXXXXXXXXXXXXDDRDGEVNNRGTVPKRVDDGFFSTIPPELFPHILKFLSSEDLVAC 480
                             +   NN+G   +R+  G  S IPPELFPHILKFLSSEDL+AC
Sbjct: 57  --------EKEQNQKKKANNNNNNKGE-QRRIKSGVLSKIPPELFPHILKFLSSEDLIAC 107

Query: 481 SLVCRFLNFASSDESLWRRLYCMRWGILPPTKKLRDRAWKKLYIQRDEEDMVEFVRDCPS 660
           SLVCRFLNFA+SDESLWRRLYCMRWG LPP  KL + AWKKLYIQRDEEDMV+ VR+CP 
Sbjct: 108 SLVCRFLNFAASDESLWRRLYCMRWGFLPPATKLCENAWKKLYIQRDEEDMVKLVRNCPP 167

Query: 661 EFKEYYIQMQVAKRSQTPLPSQI 729
           EFKEYY+QM  AKRSQTPLPSQ+
Sbjct: 168 EFKEYYVQMNAAKRSQTPLPSQV 190


>ref|XP_002270881.1| PREDICTED: F-box protein SKIP31 [Vitis vinifera]
           gi|296085460|emb|CBI29192.3| unnamed protein product
           [Vitis vinifera]
          Length = 305

 Score =  235 bits (600), Expect = 3e-59
 Identities = 125/197 (63%), Positives = 138/197 (70%)
 Frame = +1

Query: 139 MTFSEDEDENLANYLESEVLCEISDQXXXXXXXXXXRQPKRLRVDDRDGEVXXXXXXXXX 318
           MT SEDEDENLA++LESEVL E SDQ           Q KRLRVD               
Sbjct: 1   MTVSEDEDENLAHFLESEVLSEASDQEKDAVAEQP--QAKRLRVD--------------- 43

Query: 319 XXXXXXXXXDDRDGEVNNRGTVPKRVDDGFFSTIPPELFPHILKFLSSEDLVACSLVCRF 498
                         E  ++ + PKR++ G FS IPPELF HILKFLSSEDLVACSLVCRF
Sbjct: 44  --------------EEGSKRSAPKRIETGIFSKIPPELFHHILKFLSSEDLVACSLVCRF 89

Query: 499 LNFASSDESLWRRLYCMRWGILPPTKKLRDRAWKKLYIQRDEEDMVEFVRDCPSEFKEYY 678
           LN A+SDESLWRRLYCMRWG+L PTKK R  AWKKLYI+RDEEDM+EFVR+CPSEFKEYY
Sbjct: 90  LNCAASDESLWRRLYCMRWGLLQPTKKFRQCAWKKLYIERDEEDMIEFVRNCPSEFKEYY 149

Query: 679 IQMQVAKRSQTPLPSQI 729
           IQMQVAKRSQ PL SQ+
Sbjct: 150 IQMQVAKRSQAPLLSQV 166



 Score =  219 bits (559), Expect = 2e-54
 Identities = 107/142 (75%), Positives = 119/142 (83%)
 Frame = +3

Query: 858  LKDDWMILDKSVADQVSIWKSNKGLTDKVFSDHACSGETCSYYQIGDVFVCENTGYVHVC 1037
            + DD +ILDK+VADQVS WKS++GLTDKV  DH CSG TC+YYQIGDVFVCE TG VHVC
Sbjct: 166  VNDDRIILDKTVADQVSSWKSSRGLTDKVDIDHNCSGVTCTYYQIGDVFVCEKTGRVHVC 225

Query: 1038 DDTCKEDVLDPENELLVCTISGHCFDRLLSPSEIAGDMEEQQEGGVTDEAEPFMGSGRFA 1217
            DDTC+E V D  N+++VCTISGHCFDRLL   E   D+ EQQ+GGVTDEAEPFMGSGRFA
Sbjct: 226  DDTCREVVTDTANDIVVCTISGHCFDRLLVSDE-EPDI-EQQQGGVTDEAEPFMGSGRFA 283

Query: 1218 RAYQLGYNCEDEKELEACLRFC 1283
            RAY LGYNC DEKELEA LRFC
Sbjct: 284  RAYLLGYNCADEKELEAALRFC 305


>ref|XP_003537711.1| PREDICTED: F-box protein SKIP31-like [Glycine max]
          Length = 325

 Score =  234 bits (596), Expect = 8e-59
 Identities = 110/142 (77%), Positives = 121/142 (85%)
 Frame = +3

Query: 858  LKDDWMILDKSVADQVSIWKSNKGLTDKVFSDHACSGETCSYYQIGDVFVCENTGYVHVC 1037
            LKDD +ILDK++ADQVS WKS++GL+D V +DHACSGETCSYY IGDVF+CE TG VHVC
Sbjct: 184  LKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQVHVC 243

Query: 1038 DDTCKEDVLDPENELLVCTISGHCFDRLLSPSEIAGDMEEQQEGGVTDEAEPFMGSGRFA 1217
            DDTC+E V+DP N LLVCTISGHC DRLLSPSE      EQQ+GGV DEAEPFMGSGRFA
Sbjct: 244  DDTCRELVMDPTNGLLVCTISGHCLDRLLSPSEEMEPDTEQQQGGVADEAEPFMGSGRFA 303

Query: 1218 RAYQLGYNCEDEKELEACLRFC 1283
            RAY LGYNC DEKELEA LRFC
Sbjct: 304  RAYLLGYNCADEKELEATLRFC 325



 Score =  223 bits (569), Expect = 1e-55
 Identities = 116/197 (58%), Positives = 136/197 (69%)
 Frame = +1

Query: 139 MTFSEDEDENLANYLESEVLCEISDQXXXXXXXXXXRQPKRLRVDDRDGEVXXXXXXXXX 318
           MT S+DEDENLA +LESEVL E+SD+           +PK  R    + E+         
Sbjct: 1   MTLSDDEDENLAQFLESEVLSEVSDKEEENV-----EEPKAKRKRVEEDEITKQKQSSDS 55

Query: 319 XXXXXXXXXDDRDGEVNNRGTVPKRVDDGFFSTIPPELFPHILKFLSSEDLVACSLVCRF 498
                          V + G V +R++ G+FS IPPELF HILKFLSSEDLV+CSLVCRF
Sbjct: 56  SSAPKNI--------VVSNGVVLRRIETGYFSQIPPELFNHILKFLSSEDLVSCSLVCRF 107

Query: 499 LNFASSDESLWRRLYCMRWGILPPTKKLRDRAWKKLYIQRDEEDMVEFVRDCPSEFKEYY 678
           LN+A+SDE+LWRRLYCMRWGILPPT+KLR+  WKKLYIQRD EDMVE VR C +EFKEYY
Sbjct: 108 LNYAASDEALWRRLYCMRWGILPPTRKLRECPWKKLYIQRDGEDMVELVRSCQNEFKEYY 167

Query: 679 IQMQVAKRSQTPLPSQI 729
           IQMQ AKRSQ P PSQ+
Sbjct: 168 IQMQAAKRSQAPHPSQL 184


>gb|ACU22738.1| unknown [Glycine max]
          Length = 202

 Score =  234 bits (596), Expect = 8e-59
 Identities = 110/142 (77%), Positives = 121/142 (85%)
 Frame = +3

Query: 858  LKDDWMILDKSVADQVSIWKSNKGLTDKVFSDHACSGETCSYYQIGDVFVCENTGYVHVC 1037
            LKDD +ILDK++ADQVS WKS++GL+D V +DHACSGETCSYY IGDVF+CE TG VHVC
Sbjct: 61   LKDDRIILDKTLADQVSSWKSSRGLSDTVVTDHACSGETCSYYHIGDVFICEKTGQVHVC 120

Query: 1038 DDTCKEDVLDPENELLVCTISGHCFDRLLSPSEIAGDMEEQQEGGVTDEAEPFMGSGRFA 1217
            DDTC+E V+DP N LLVCTISGHC DRLLSPSE      EQQ+GGV DEAEPFMGSGRFA
Sbjct: 121  DDTCRELVMDPTNGLLVCTISGHCLDRLLSPSEEMEPDTEQQQGGVADEAEPFMGSGRFA 180

Query: 1218 RAYQLGYNCEDEKELEACLRFC 1283
            RAY LGYNC DEKELEA LRFC
Sbjct: 181  RAYLLGYNCADEKELEATLRFC 202



 Score =  104 bits (260), Expect = 7e-20
 Identities = 48/61 (78%), Positives = 52/61 (85%)
 Frame = +1

Query: 547 MRWGILPPTKKLRDRAWKKLYIQRDEEDMVEFVRDCPSEFKEYYIQMQVAKRSQTPLPSQ 726
           MRWGILPPT+KLR+  WKKLYIQRD EDMVE VR C +EFKEYYIQMQ AKRSQ P PSQ
Sbjct: 1   MRWGILPPTRKLRECPWKKLYIQRDGEDMVELVRSCQNEFKEYYIQMQAAKRSQVPHPSQ 60

Query: 727 I 729
           +
Sbjct: 61  L 61


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