BLASTX nr result

ID: Atractylodes21_contig00001896 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001896
         (278 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69699.1| hypothetical protein VITISV_001515 [Vitis vinifera]    80   2e-13
ref|XP_002285361.1| PREDICTED: uncharacterized protein LOC100262...    80   2e-13
ref|XP_002324318.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
gb|ABK92441.1| unknown [Populus trichocarpa]                           76   3e-12
ref|XP_003603315.1| hypothetical protein MTR_3g106250 [Medicago ...    74   1e-11

>emb|CAN69699.1| hypothetical protein VITISV_001515 [Vitis vinifera]
          Length = 372

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
 Frame = -2

Query: 277 THIGVFAITWSRTLFGRSLYIHLLPXXXXXXXXXXXXXXXXXXXS-FHLQIKPFIFWNKY 101
           T +G+F +TWSR  FGRSL++ L P                     FHL IKPF+FW KY
Sbjct: 51  TDLGIFTLTWSRNFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAFHLHIKPFVFWKKY 110

Query: 100 GSKKIPIP-TNNNDFIHIYYDLSRAKFGSGPDP 5
           GSKK+ +        I +++DL+RAKFGS P+P
Sbjct: 111 GSKKLHVAGAPGGRDIRVFWDLTRAKFGSXPEP 143


>ref|XP_002285361.1| PREDICTED: uncharacterized protein LOC100262872 [Vitis vinifera]
          Length = 371

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 2/93 (2%)
 Frame = -2

Query: 277 THIGVFAITWSRTLFGRSLYIHLLPXXXXXXXXXXXXXXXXXXXS-FHLQIKPFIFWNKY 101
           T +G+F +TWSR  FGRSL++ L P                     FHL IKPF+FW KY
Sbjct: 51  TDLGIFTLTWSRNFFGRSLHLQLHPSAAANLSPLSLSNPLSLSTPAFHLHIKPFVFWKKY 110

Query: 100 GSKKIPIP-TNNNDFIHIYYDLSRAKFGSGPDP 5
           GSKK+ +        I +++DL+RAKFGS P+P
Sbjct: 111 GSKKLHVAGAPGGRDIRVFWDLTRAKFGSWPEP 143


>ref|XP_002324318.1| predicted protein [Populus trichocarpa] gi|222865752|gb|EEF02883.1|
           predicted protein [Populus trichocarpa]
          Length = 240

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
 Frame = -2

Query: 277 THIGVFAITWSRTLFGRSLYIHLLPXXXXXXXXXXXXXXXXXXXS---FHLQIKPFIFWN 107
           T +G+F++TWS +L G SL++ L P                   S   FHL IKPF+FW 
Sbjct: 9   TDLGLFSLTWSSSLLGHSLHLRLHPIDDNASYCSPVSLSNPLSLSTISFHLNIKPFLFWK 68

Query: 106 KYGSKKIPI----PTNNNDFIHIYYDLSRAKFGSGPDP 5
           ++GSKK+ +    P      I I++DLSRA+FGSGP+P
Sbjct: 69  RHGSKKLHVINQEPDTPTPRIQIFWDLSRARFGSGPEP 106


>gb|ABK92441.1| unknown [Populus trichocarpa]
          Length = 207

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 7/98 (7%)
 Frame = -2

Query: 277 THIGVFAITWSRTLFGRSLYIHLLPXXXXXXXXXXXXXXXXXXXS---FHLQIKPFIFWN 107
           T +G+F++TWS +L G SL++ L P                   S   FHL IKPF+FW 
Sbjct: 46  TDLGLFSLTWSSSLLGHSLHLRLHPIDDNASYCSPVSLSNPLSLSTISFHLNIKPFLFWK 105

Query: 106 KYGSKKIPI----PTNNNDFIHIYYDLSRAKFGSGPDP 5
           ++GSKK+ +    P      I I++DLSRA+FGSGP+P
Sbjct: 106 RHGSKKLHVINQEPDTPTPRIQIFWDLSRARFGSGPEP 143


>ref|XP_003603315.1| hypothetical protein MTR_3g106250 [Medicago truncatula]
           gi|355492363|gb|AES73566.1| hypothetical protein
           MTR_3g106250 [Medicago truncatula]
          Length = 346

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/91 (40%), Positives = 56/91 (61%)
 Frame = -2

Query: 277 THIGVFAITWSRTLFGRSLYIHLLPXXXXXXXXXXXXXXXXXXXSFHLQIKPFIFWNKYG 98
           +++G+ ++TWSR++ GRSL++ L                     SFHL IKPFIFW K+G
Sbjct: 44  SNVGLVSLTWSRSILGRSLHVQL----HHHPFDSPPTNPSSSSSSFHLHIKPFIFWKKHG 99

Query: 97  SKKIPIPTNNNDFIHIYYDLSRAKFGSGPDP 5
           +KK+   T      H++++LS+AKFGSGP+P
Sbjct: 100 TKKLSSNT------HLFWNLSKAKFGSGPEP 124


Top