BLASTX nr result

ID: Atractylodes21_contig00001883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001883
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vini...   500   e-139
ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thal...   499   e-139
gb|ACN40824.1| unknown [Picea sitchensis]                             496   e-138
ref|XP_001782790.1| predicted protein [Physcomitrella patens sub...   495   e-138
ref|XP_001777081.1| predicted protein [Physcomitrella patens sub...   495   e-138

>ref|XP_002285721.1| PREDICTED: tubulin alpha-1 chain [Vitis vinifera]
          Length = 449

 Score =  500 bits (1287), Expect = e-139
 Identities = 253/284 (89%), Positives = 253/284 (89%)
 Frame = -2

Query: 854 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVADDAFNTFFSETSAGKHV 675
           EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGV  DAFNTFFSET AGKHV
Sbjct: 3   EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVGHDAFNTFFSETGAGKHV 62

Query: 674 PRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 495
           PRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV
Sbjct: 63  PRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122

Query: 494 RKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTIYPSPQVSTAVV 315
           RKLADNCTGLQGFLVFNAV                SVDYGKKSKLGFTIYPSPQVSTAVV
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVV 182

Query: 314 EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXL 135
           EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR            L
Sbjct: 183 EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSL 242

Query: 134 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL 3
           RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL
Sbjct: 243 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL 286


>ref|NP_197478.1| tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana]
           gi|15241179|ref|NP_197479.1| tubulin alpha-3/alpha-5
           chain [Arabidopsis thaliana]
           gi|297808045|ref|XP_002871906.1| tubulin alpha-3
           [Arabidopsis lyrata subsp. lyrata]
           gi|297812159|ref|XP_002873963.1| tubulin alpha-3
           [Arabidopsis lyrata subsp. lyrata]
           gi|408407916|sp|Q56WH1.2|TBA3_ARATH RecName:
           Full=Tubulin alpha-3 chain
           gi|408407918|sp|B9DHQ0.2|TBA5_ARATH RecName:
           Full=Tubulin alpha-5 chain
           gi|13605805|gb|AAK32888.1|AF367301_1
           AT5g19770/T29J13_190 [Arabidopsis thaliana]
           gi|166912|gb|AAA32888.1| alpha-tubulin [Arabidopsis
           thaliana] gi|166918|gb|AAA32891.1| alpha-5 tubulin
           [Arabidopsis thaliana] gi|14532776|gb|AAK64169.1|
           putative tubulin alpha-5 chain [Arabidopsis thaliana]
           gi|17473826|gb|AAL38340.1| unknown protein [Arabidopsis
           thaliana] gi|19310733|gb|AAL85097.1| putative tubulin
           alpha-5 chain [Arabidopsis thaliana]
           gi|23397154|gb|AAN31860.1| putative tubulin alpha-5
           chain [Arabidopsis thaliana] gi|23397156|gb|AAN31861.1|
           putative tubulin alpha-5 chain [Arabidopsis thaliana]
           gi|23505949|gb|AAN28834.1| At5g19770/T29J13_190
           [Arabidopsis thaliana] gi|24899739|gb|AAN65084.1|
           unknown protein [Arabidopsis thaliana]
           gi|297317743|gb|EFH48165.1| tubulin alpha-3 [Arabidopsis
           lyrata subsp. lyrata] gi|297319800|gb|EFH50222.1|
           tubulin alpha-3 [Arabidopsis lyrata subsp. lyrata]
           gi|332005364|gb|AED92747.1| tubulin alpha-3/alpha-5
           chain [Arabidopsis thaliana] gi|332005365|gb|AED92748.1|
           tubulin alpha-3/alpha-5 chain [Arabidopsis thaliana]
          Length = 450

 Score =  499 bits (1284), Expect = e-139
 Identities = 252/284 (88%), Positives = 253/284 (89%)
 Frame = -2

Query: 854 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVADDAFNTFFSETSAGKHV 675
           EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVA DAFNTFFSET AGKHV
Sbjct: 3   EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHV 62

Query: 674 PRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 495
           PRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV
Sbjct: 63  PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122

Query: 494 RKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTIYPSPQVSTAVV 315
           RKLADNCTGLQGFLVFNAV                SVDYGKKSKLGFTIYPSPQVSTAVV
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVV 182

Query: 314 EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXL 135
           EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR            L
Sbjct: 183 EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSL 242

Query: 134 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL 3
           RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISA KAYHEQL
Sbjct: 243 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAAKAYHEQL 286


>gb|ACN40824.1| unknown [Picea sitchensis]
          Length = 449

 Score =  496 bits (1277), Expect = e-138
 Identities = 249/284 (87%), Positives = 252/284 (88%)
 Frame = -2

Query: 854 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVADDAFNTFFSETSAGKHV 675
           EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDT+VGV DDAFNTFFSET AGKHV
Sbjct: 3   EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTSVGVGDDAFNTFFSETGAGKHV 62

Query: 674 PRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 495
           PRA+ VDLEPTVIDEVRTG YRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV
Sbjct: 63  PRAVIVDLEPTVIDEVRTGAYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122

Query: 494 RKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTIYPSPQVSTAVV 315
           RKLADNCTGLQGFLVFNAV                SVDYGKKSKLGFTIYPSPQVSTAVV
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVV 182

Query: 314 EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXL 135
           EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR            L
Sbjct: 183 EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSL 242

Query: 134 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL 3
           RFDGAINVD+TEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL
Sbjct: 243 RFDGAINVDVTEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL 286


>ref|XP_001782790.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|168061676|ref|XP_001782813.1| predicted protein
           [Physcomitrella patens subsp. patens]
           gi|25396545|dbj|BAC24799.1| alpha tubulin
           [Physcomitrella patens] gi|162665692|gb|EDQ52367.1|
           predicted protein [Physcomitrella patens subsp. patens]
           gi|162665715|gb|EDQ52390.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 449

 Score =  495 bits (1275), Expect = e-138
 Identities = 249/284 (87%), Positives = 252/284 (88%)
 Frame = -2

Query: 854 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVADDAFNTFFSETSAGKHV 675
           EIISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSDTTVG  DDAFNTFFSET AGKHV
Sbjct: 3   EIISIHIGQAGIQVGNACWELYCLEHGIQPDGRMPSDTTVGGGDDAFNTFFSETGAGKHV 62

Query: 674 PRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 495
           PRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV
Sbjct: 63  PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122

Query: 494 RKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTIYPSPQVSTAVV 315
           RKLADNCTGLQGFLVFNAV                SVDYGKKSKLGFTIYPSPQVSTAVV
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVV 182

Query: 314 EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXL 135
           EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR            L
Sbjct: 183 EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSL 242

Query: 134 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL 3
           RFDGA+NVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL
Sbjct: 243 RFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL 286


>ref|XP_001777081.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162671524|gb|EDQ58074.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 449

 Score =  495 bits (1275), Expect = e-138
 Identities = 249/284 (87%), Positives = 252/284 (88%)
 Frame = -2

Query: 854 EIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVADDAFNTFFSETSAGKHV 675
           EIISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSDTTVG  DDAFNTFFSET AGKHV
Sbjct: 3   EIISIHIGQAGIQVGNACWELYCLEHGIQPDGRMPSDTTVGGGDDAFNTFFSETGAGKHV 62

Query: 674 PRAIFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 495
           PRA+FVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV
Sbjct: 63  PRAVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRV 122

Query: 494 RKLADNCTGLQGFLVFNAVXXXXXXXXXXXXXXXXSVDYGKKSKLGFTIYPSPQVSTAVV 315
           RKLADNCTGLQGFLVFNAV                SVDYGKKSKLGFTIYPSPQVSTAVV
Sbjct: 123 RKLADNCTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVV 182

Query: 314 EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRXXXXXXXXXXXXL 135
           EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNR            L
Sbjct: 183 EPYNSVLSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSL 242

Query: 134 RFDGAINVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL 3
           RFDGA+NVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL
Sbjct: 243 RFDGALNVDITEFQTNLVPYPRIHFMLSSYAPVISAEKAYHEQL 286


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