BLASTX nr result

ID: Atractylodes21_contig00001848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001848
         (1148 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629838.1| 39S ribosomal protein L46 [Medicago truncatu...   318   2e-84
ref|XP_002275559.2| PREDICTED: uncharacterized protein LOC100262...   317   4e-84
emb|CBI40412.3| unnamed protein product [Vitis vinifera]              317   4e-84
emb|CAN73362.1| hypothetical protein VITISV_006167 [Vitis vinifera]   317   4e-84
ref|XP_003548630.1| PREDICTED: 39S ribosomal protein L46, mitoch...   317   5e-84

>ref|XP_003629838.1| 39S ribosomal protein L46 [Medicago truncatula]
           gi|355523860|gb|AET04314.1| 39S ribosomal protein L46
           [Medicago truncatula]
          Length = 279

 Score =  318 bits (814), Expect = 2e-84
 Identities = 153/230 (66%), Positives = 189/230 (82%), Gaps = 1/230 (0%)
 Frame = +3

Query: 156 TLARLVVSNRGFCTSSKGADNDKIVASVLFERLPVVIPKIDPVVYAFEEFSFRWRQQFRR 335
           +L R ++  RGF TSS     +K+VASVLFERLPVVIPKIDP VYAF+EFSFRWRQQ++R
Sbjct: 55  SLVRPLLMRRGFSTSS-----EKMVASVLFERLPVVIPKIDPNVYAFQEFSFRWRQQYQR 109

Query: 336 TYPEDFLKKSDTRGKGEYQIDFVPAPRITEADKTNDKRSXXXXXXXXXXXXXYGDAHGTP 515
            YP++FL +SD RGKG+YQID+VPAPRITEADK ND+RS             +GDA+G P
Sbjct: 110 RYPDEFLDRSDARGKGDYQIDYVPAPRITEADKQNDRRSLQRALDRRLYLLLFGDAYGAP 169

Query: 516 KGQPVWHFPEKVYESEETLRKCAESALESVIRDLSHTYFVGNAPMGHIAMPPTEKNTDNS 695
            G+PVWHFPEKVYESE+T+RKCAESAL+SV+ DLS+TYFVGNAPM HI + P E+ T ++
Sbjct: 170 SGKPVWHFPEKVYESEDTMRKCAESALKSVLGDLSNTYFVGNAPMAHIVVQPKEEQTGST 229

Query: 696 SFKRFFFKAQVIATNKFNI-KSQDFVWVTKDELLEYFPDHSQYLSKMIIS 842
           SFK+FFFK+QVIA NKF+I K +DFVWVTKDEL+EYFP+ +++L+KMIIS
Sbjct: 230 SFKKFFFKSQVIAKNKFDIGKGEDFVWVTKDELMEYFPEQAEFLNKMIIS 279


>ref|XP_002275559.2| PREDICTED: uncharacterized protein LOC100262014 [Vitis vinifera]
          Length = 977

 Score =  317 bits (812), Expect = 4e-84
 Identities = 154/235 (65%), Positives = 188/235 (80%), Gaps = 1/235 (0%)
 Frame = +3

Query: 138  MQRSCRTLARLVVSNRGFCTSSKGADNDKIVASVLFERLPVVIPKIDPVVYAFEEFSFRW 317
            M+R+  +LAR +   RGFCTS+    ++KIVASVLFERLPVVIPKIDPVVYAF+EFSFRW
Sbjct: 746  MRRTFTSLARSLPPARGFCTST----SEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRW 801

Query: 318  RQQFRRTYPEDFLKKSDTRGKGEYQIDFVPAPRITEADKTNDKRSXXXXXXXXXXXXXYG 497
            RQQ+RR YP++  K+S+ RGKG+YQID+VPAPR+TEAD+ ND+RS             +G
Sbjct: 802  RQQYRRKYPDEIFKRSEERGKGDYQIDYVPAPRVTEADENNDRRSLQRALDRRLYLLLFG 861

Query: 498  DAHGTPKGQPVWHFPEKVYESEETLRKCAESALESVIRDLSHTYFVGNAPMGHIAMPPTE 677
              +G P G+PVWHFPEKVY SEETLRKCAESALESVI DLSHTYFVGNAP  H+ + PTE
Sbjct: 862  TTYGAPDGKPVWHFPEKVYGSEETLRKCAESALESVIGDLSHTYFVGNAPFAHMVIQPTE 921

Query: 678  KNTDNSSFKRFFFKAQVIATNKFNI-KSQDFVWVTKDELLEYFPDHSQYLSKMII 839
               D  SFKRFFFK+QVIATNK+++ K +D VWVTKDEL+EYFP+ +++L+KMII
Sbjct: 922  NVPDLPSFKRFFFKSQVIATNKYDVGKCKDHVWVTKDELVEYFPEQAEFLNKMII 976


>emb|CBI40412.3| unnamed protein product [Vitis vinifera]
          Length = 232

 Score =  317 bits (812), Expect = 4e-84
 Identities = 154/235 (65%), Positives = 188/235 (80%), Gaps = 1/235 (0%)
 Frame = +3

Query: 138 MQRSCRTLARLVVSNRGFCTSSKGADNDKIVASVLFERLPVVIPKIDPVVYAFEEFSFRW 317
           M+R+  +LAR +   RGFCTS+    ++KIVASVLFERLPVVIPKIDPVVYAF+EFSFRW
Sbjct: 1   MRRTFTSLARSLPPARGFCTST----SEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRW 56

Query: 318 RQQFRRTYPEDFLKKSDTRGKGEYQIDFVPAPRITEADKTNDKRSXXXXXXXXXXXXXYG 497
           RQQ+RR YP++  K+S+ RGKG+YQID+VPAPR+TEAD+ ND+RS             +G
Sbjct: 57  RQQYRRKYPDEIFKRSEERGKGDYQIDYVPAPRVTEADENNDRRSLQRALDRRLYLLLFG 116

Query: 498 DAHGTPKGQPVWHFPEKVYESEETLRKCAESALESVIRDLSHTYFVGNAPMGHIAMPPTE 677
             +G P G+PVWHFPEKVY SEETLRKCAESALESVI DLSHTYFVGNAP  H+ + PTE
Sbjct: 117 TTYGAPDGKPVWHFPEKVYGSEETLRKCAESALESVIGDLSHTYFVGNAPFAHMVIQPTE 176

Query: 678 KNTDNSSFKRFFFKAQVIATNKFNI-KSQDFVWVTKDELLEYFPDHSQYLSKMII 839
              D  SFKRFFFK+QVIATNK+++ K +D VWVTKDEL+EYFP+ +++L+KMII
Sbjct: 177 NVPDLPSFKRFFFKSQVIATNKYDVGKCKDHVWVTKDELVEYFPEQAEFLNKMII 231


>emb|CAN73362.1| hypothetical protein VITISV_006167 [Vitis vinifera]
          Length = 253

 Score =  317 bits (812), Expect = 4e-84
 Identities = 154/235 (65%), Positives = 188/235 (80%), Gaps = 1/235 (0%)
 Frame = +3

Query: 138 MQRSCRTLARLVVSNRGFCTSSKGADNDKIVASVLFERLPVVIPKIDPVVYAFEEFSFRW 317
           M+R+  +LAR +   RGFCTS+    ++KIVASVLFERLPVVIPKIDPVVYAF+EFSFRW
Sbjct: 22  MRRTFTSLARSLPPARGFCTST----SEKIVASVLFERLPVVIPKIDPVVYAFQEFSFRW 77

Query: 318 RQQFRRTYPEDFLKKSDTRGKGEYQIDFVPAPRITEADKTNDKRSXXXXXXXXXXXXXYG 497
           RQQ+RR YP++  K+S+ RGKG+YQID+VPAPR+TEAD+ ND+RS             +G
Sbjct: 78  RQQYRRKYPDEIFKRSEERGKGDYQIDYVPAPRVTEADENNDRRSLQRALDRRLYLLLFG 137

Query: 498 DAHGTPKGQPVWHFPEKVYESEETLRKCAESALESVIRDLSHTYFVGNAPMGHIAMPPTE 677
             +G P G+PVWHFPEKVY SEETLRKCAESALESVI DLSHTYFVGNAP  H+ + PTE
Sbjct: 138 TTYGAPDGKPVWHFPEKVYGSEETLRKCAESALESVIGDLSHTYFVGNAPFAHMVIQPTE 197

Query: 678 KNTDNSSFKRFFFKAQVIATNKFNI-KSQDFVWVTKDELLEYFPDHSQYLSKMII 839
              D  SFKRFFFK+QVIATNK+++ K +D VWVTKDEL+EYFP+ +++L+KMII
Sbjct: 198 NVPDLPSFKRFFFKSQVIATNKYDVGKCKDHVWVTKDELVEYFPEQAEFLNKMII 252


>ref|XP_003548630.1| PREDICTED: 39S ribosomal protein L46, mitochondrial-like [Glycine
           max]
          Length = 228

 Score =  317 bits (811), Expect = 5e-84
 Identities = 152/225 (67%), Positives = 187/225 (83%), Gaps = 1/225 (0%)
 Frame = +3

Query: 171 VVSNRGFCTSSKGADNDKIVASVLFERLPVVIPKIDPVVYAFEEFSFRWRQQFRRTYPED 350
           +++ RGF TSS     + +VASVLFERLPVVIPKIDPVVYAF+EFSFRWRQQ++R YP++
Sbjct: 9   LLTRRGFSTSS-----ENLVASVLFERLPVVIPKIDPVVYAFQEFSFRWRQQYQRRYPDE 63

Query: 351 FLKKSDTRGKGEYQIDFVPAPRITEADKTNDKRSXXXXXXXXXXXXXYGDAHGTPKGQPV 530
           FL KSD RGKG+YQID+VPAPRITEAD++ND+RS             YG+A+G P G+PV
Sbjct: 64  FLDKSDARGKGDYQIDYVPAPRITEADQSNDRRSLQRALDRRLYLLLYGNAYGAPSGKPV 123

Query: 531 WHFPEKVYESEETLRKCAESALESVIRDLSHTYFVGNAPMGHIAMPPTEKNTDNSSFKRF 710
           WHFPEKVYESE+T+RKCAESAL+SVI DLS+TYFVGNAPM H+ + PTE  + ++SFKRF
Sbjct: 124 WHFPEKVYESEDTMRKCAESALKSVIGDLSNTYFVGNAPMAHMVVQPTENQSGSTSFKRF 183

Query: 711 FFKAQVIATNKFNI-KSQDFVWVTKDELLEYFPDHSQYLSKMIIS 842
           FFK+QVIA NKF+I K +DFVWVTKDEL EYFP+ +++L+KMIIS
Sbjct: 184 FFKSQVIAKNKFDIGKCEDFVWVTKDELTEYFPEQAEFLNKMIIS 228


Top