BLASTX nr result

ID: Atractylodes21_contig00001815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001815
         (593 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004165714.1| PREDICTED: probable protein Pop3-like [Cucum...   174   1e-41
ref|XP_004147622.1| PREDICTED: LOW QUALITY PROTEIN: probable pro...   174   1e-41
pdb|1Q53|A Chain A, Solution Structure Of Hypothetical Arabidops...   167   1e-39
ref|NP_566569.1| putative protein Pop3 [Arabidopsis thaliana] gi...   167   1e-39
gb|AAM63750.1| pop3 peptide [Arabidopsis thaliana]                    166   3e-39

>ref|XP_004165714.1| PREDICTED: probable protein Pop3-like [Cucumis sativus]
          Length = 109

 Score =  174 bits (441), Expect = 1e-41
 Identities = 83/102 (81%), Positives = 93/102 (91%)
 Frame = -2

Query: 568 GEVKHILLAKFKDGISEEQIDDLIKGYANLVNHVEPMKSFRWGKDVSIENLHQGFTHVFE 389
           G VKHILLAKFK+GISEEQID LIKGYANLVN +EPMK+F+ GKDVSIENLHQGFTHVFE
Sbjct: 6   GVVKHILLAKFKNGISEEQIDQLIKGYANLVNLIEPMKAFQCGKDVSIENLHQGFTHVFE 65

Query: 388 STFESTEGIATYISHPVHVDFANGFLAQLDKVLVVDYKPTAV 263
           STFEST+GIA YISHP HV+FAN FL+ LDKV+V+DYKPT +
Sbjct: 66  STFESTQGIAEYISHPAHVEFANKFLSSLDKVIVIDYKPTLI 107


>ref|XP_004147622.1| PREDICTED: LOW QUALITY PROTEIN: probable protein Pop3-like [Cucumis
           sativus]
          Length = 112

 Score =  174 bits (440), Expect = 1e-41
 Identities = 84/105 (80%), Positives = 94/105 (89%), Gaps = 3/105 (2%)
 Frame = -2

Query: 568 GEVKHILLAKFKDGISEEQIDDLIKGYANLVNHVEPMKSFRW---GKDVSIENLHQGFTH 398
           G VKHILLAKFK+GISEEQID LIKGYANLVN +EPMK+F+W   GKDVSIENLHQGFTH
Sbjct: 6   GVVKHILLAKFKNGISEEQIDQLIKGYANLVNLIEPMKAFQWXLSGKDVSIENLHQGFTH 65

Query: 397 VFESTFESTEGIATYISHPVHVDFANGFLAQLDKVLVVDYKPTAV 263
           VFESTFEST+GIA YISHP HV+FAN FL+ LDKV+V+DYKPT +
Sbjct: 66  VFESTFESTQGIAEYISHPAHVEFANKFLSSLDKVIVIDYKPTLI 110


>pdb|1Q53|A Chain A, Solution Structure Of Hypothetical Arabidopsis Thaliana
           Protein At3g17210. Center For Eukaryotic Structural
           Genomics Target 13081 gi|159162872|pdb|1Q53|B Chain B,
           Solution Structure Of Hypothetical Arabidopsis Thaliana
           Protein At3g17210. Center For Eukaryotic Structural
           Genomics Target 13081
          Length = 112

 Score =  167 bits (423), Expect = 1e-39
 Identities = 76/107 (71%), Positives = 91/107 (85%)
 Frame = -2

Query: 580 EREMGEVKHILLAKFKDGISEEQIDDLIKGYANLVNHVEPMKSFRWGKDVSIENLHQGFT 401
           E   G VKH+LLA FKDG+S E+I++LIKGYANLVN +EPMK+F WGKDVSIENLHQG+T
Sbjct: 5   EEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYT 64

Query: 400 HVFESTFESTEGIATYISHPVHVDFANGFLAQLDKVLVVDYKPTAVN 260
           H+FESTFES E +A YI+HP HV+FA  FL  LDKVLV+DYKPT+V+
Sbjct: 65  HIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSVS 111


>ref|NP_566569.1| putative protein Pop3 [Arabidopsis thaliana]
           gi|51316534|sp|Q9LUV2.1|POP3_ARATH RecName:
           Full=Probable protein Pop3
           gi|13877523|gb|AAK43839.1|AF370462_1 Unknown protein
           [Arabidopsis thaliana] gi|11994536|dbj|BAB02723.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|17978771|gb|AAL47379.1| unknown protein [Arabidopsis
           thaliana] gi|110741422|dbj|BAF02259.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332642400|gb|AEE75921.1| putative protein Pop3
           [Arabidopsis thaliana]
          Length = 109

 Score =  167 bits (423), Expect = 1e-39
 Identities = 76/107 (71%), Positives = 91/107 (85%)
 Frame = -2

Query: 580 EREMGEVKHILLAKFKDGISEEQIDDLIKGYANLVNHVEPMKSFRWGKDVSIENLHQGFT 401
           E   G VKH+LLA FKDG+S E+I++LIKGYANLVN +EPMK+F WGKDVSIENLHQG+T
Sbjct: 2   EEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYT 61

Query: 400 HVFESTFESTEGIATYISHPVHVDFANGFLAQLDKVLVVDYKPTAVN 260
           H+FESTFES E +A YI+HP HV+FA  FL  LDKVLV+DYKPT+V+
Sbjct: 62  HIFESTFESKEAVAEYIAHPAHVEFATIFLGSLDKVLVIDYKPTSVS 108


>gb|AAM63750.1| pop3 peptide [Arabidopsis thaliana]
          Length = 109

 Score =  166 bits (420), Expect = 3e-39
 Identities = 76/107 (71%), Positives = 90/107 (84%)
 Frame = -2

Query: 580 EREMGEVKHILLAKFKDGISEEQIDDLIKGYANLVNHVEPMKSFRWGKDVSIENLHQGFT 401
           E   G VKH+LLA FKDG+S E+I++LIKGYANLVN +EPMK+F WGKDVSIENLHQG+T
Sbjct: 2   EEAKGPVKHVLLASFKDGVSPEKIEELIKGYANLVNLIEPMKAFHWGKDVSIENLHQGYT 61

Query: 400 HVFESTFESTEGIATYISHPVHVDFANGFLAQLDKVLVVDYKPTAVN 260
           H+FESTFES E +A YI+HP HV FA  FL  LDKVLV+DYKPT+V+
Sbjct: 62  HIFESTFESKEAVAEYIAHPAHVKFATIFLGSLDKVLVIDYKPTSVS 108


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