BLASTX nr result

ID: Atractylodes21_contig00001785 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001785
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35880.1| unknown [Medicago truncatula]                          147   1e-33
ref|XP_003637475.1| Chlorophyll a-b binding protein [Medicago tr...   147   1e-33
ref|XP_003637339.1| Chlorophyll a-b binding protein [Medicago tr...   147   1e-33
pdb|3LW5|2 Chain 2, Improved Model Of Plant Photosystem I             145   3e-33
pdb|2WSC|2 Chain 2, Improved Model Of Plant Photosystem I gi|268...   145   3e-33

>gb|AFK35880.1| unknown [Medicago truncatula]
          Length = 268

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -3

Query: 207 WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFIVELIFIGWAEGRRWADI 28
           WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTD TTLFIVELIFIGWAEGRRWADI
Sbjct: 111 WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADI 170

Query: 27  INPGCVNTD 1
           +NPGCVNTD
Sbjct: 171 LNPGCVNTD 179


>ref|XP_003637475.1| Chlorophyll a-b binding protein [Medicago truncatula]
           gi|355503410|gb|AES84613.1| Chlorophyll a-b binding
           protein [Medicago truncatula]
          Length = 294

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -3

Query: 207 WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFIVELIFIGWAEGRRWADI 28
           WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTD TTLFIVELIFIGWAEGRRWADI
Sbjct: 137 WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADI 196

Query: 27  INPGCVNTD 1
           +NPGCVNTD
Sbjct: 197 LNPGCVNTD 205


>ref|XP_003637339.1| Chlorophyll a-b binding protein [Medicago truncatula]
           gi|355503274|gb|AES84477.1| Chlorophyll a-b binding
           protein [Medicago truncatula]
          Length = 268

 Score =  147 bits (370), Expect = 1e-33
 Identities = 67/69 (97%), Positives = 68/69 (98%)
 Frame = -3

Query: 207 WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFIVELIFIGWAEGRRWADI 28
           WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTD TTLFIVELIFIGWAEGRRWADI
Sbjct: 111 WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDTTTLFIVELIFIGWAEGRRWADI 170

Query: 27  INPGCVNTD 1
           +NPGCVNTD
Sbjct: 171 LNPGCVNTD 179


>pdb|3LW5|2 Chain 2, Improved Model Of Plant Photosystem I
          Length = 176

 Score =  145 bits (367), Expect = 3e-33
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = -3

Query: 207 WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFIVELIFIGWAEGRRWADI 28
           WAMLGAAGIFIPEFLTK+GILNTPSWYTAGEQEYFTD TTLFIVEL+FIGWAEGRRWADI
Sbjct: 19  WAMLGAAGIFIPEFLTKLGILNTPSWYTAGEQEYFTDTTTLFIVELVFIGWAEGRRWADI 78

Query: 27  INPGCVNTD 1
           +NPGCVNTD
Sbjct: 79  LNPGCVNTD 87


>pdb|2WSC|2 Chain 2, Improved Model Of Plant Photosystem I
           gi|268612177|pdb|2WSE|2 Chain 2, Improved Model Of Plant
           Photosystem I gi|268612195|pdb|2WSF|2 Chain 2, Improved
           Model Of Plant Photosystem I
          Length = 269

 Score =  145 bits (367), Expect = 3e-33
 Identities = 65/69 (94%), Positives = 68/69 (98%)
 Frame = -3

Query: 207 WAMLGAAGIFIPEFLTKIGILNTPSWYTAGEQEYFTDKTTLFIVELIFIGWAEGRRWADI 28
           WAMLGAAGIFIPEFLTK+GILNTPSWYTAGEQEYFTD TTLFIVEL+FIGWAEGRRWADI
Sbjct: 112 WAMLGAAGIFIPEFLTKLGILNTPSWYTAGEQEYFTDTTTLFIVELVFIGWAEGRRWADI 171

Query: 27  INPGCVNTD 1
           +NPGCVNTD
Sbjct: 172 LNPGCVNTD 180


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