BLASTX nr result

ID: Atractylodes21_contig00001783 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001783
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicag...   141   5e-32
ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing fact...   138   4e-31
ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing fact...   138   4e-31
ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing fact...   137   7e-31
ref|XP_002973625.1| hypothetical protein SELMODRAFT_173603 [Sela...   137   7e-31

>ref|XP_003597914.1| Pre-mRNA-processing-splicing factor [Medicago truncatula]
            gi|355486962|gb|AES68165.1| Pre-mRNA-processing-splicing
            factor [Medicago truncatula]
          Length = 2398

 Score =  141 bits (356), Expect = 5e-32
 Identities = 71/89 (79%), Positives = 75/89 (84%), Gaps = 4/89 (4%)
 Frame = -1

Query: 401  EPQMVLFNIYDDWLTSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS 222
            EPQMVLFNIYDDWL SISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS
Sbjct: 1933 EPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS 1992

Query: 221  LSDHQWVKVNQ----MSFLSYHHRMLPFM 147
            LSD QW+KVN     + F S   +  PF+
Sbjct: 1993 LSDDQWMKVNLICDFLFFKSVSGKFNPFL 2021



 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/77 (71%), Positives = 62/77 (80%), Gaps = 12/77 (15%)
 Frame = -3

Query: 195  KPNELPQLSPQ-----DVTFHARILENNKQWDGY-------NFTPGSCSLTAYKLTPTGY 52
            +PNELPQL+PQ     D+T HA++LENNKQWDG        +FTPGSCSLTAYKLTP+GY
Sbjct: 2238 QPNELPQLAPQKLSLQDLTSHAKVLENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGY 2297

Query: 51   EWGRANKDTGSNPHGYL 1
            EWGR NKDTGSNPHGYL
Sbjct: 2298 EWGRINKDTGSNPHGYL 2314


>ref|XP_003546924.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
          Length = 2358

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/69 (94%), Positives = 67/69 (97%)
 Frame = -1

Query: 401  EPQMVLFNIYDDWLTSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS 222
            EPQMVLFNIYDDWL SISSYTAFSRLILILRALHVNNEKAKMLLKPDKTI+TEPHHIWPS
Sbjct: 1933 EPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIITEPHHIWPS 1992

Query: 221  LSDHQWVKV 195
            LSD QW+KV
Sbjct: 1993 LSDDQWMKV 2001



 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/72 (79%), Positives = 62/72 (86%), Gaps = 7/72 (9%)
 Frame = -3

Query: 195  KPNELPQLSPQDVTFHARILENNKQWDGY-------NFTPGSCSLTAYKLTPTGYEWGRA 37
            +PNELPQLSPQD+T HA+ILENNKQWDG        +FTPGSCSLTAYKLTP+GYEWGR 
Sbjct: 2203 QPNELPQLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRV 2262

Query: 36   NKDTGSNPHGYL 1
            NKDTGSNPHGYL
Sbjct: 2263 NKDTGSNPHGYL 2274


>ref|XP_003542119.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like [Glycine max]
          Length = 2358

 Score =  138 bits (348), Expect = 4e-31
 Identities = 65/69 (94%), Positives = 67/69 (97%)
 Frame = -1

Query: 401  EPQMVLFNIYDDWLTSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS 222
            EPQMVLFNIYDDWL SISSYTAFSRLILILRALHVNNEKAKMLLKPDKTI+TEPHHIWPS
Sbjct: 1933 EPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIITEPHHIWPS 1992

Query: 221  LSDHQWVKV 195
            LSD QW+KV
Sbjct: 1993 LSDDQWMKV 2001



 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/72 (79%), Positives = 62/72 (86%), Gaps = 7/72 (9%)
 Frame = -3

Query: 195  KPNELPQLSPQDVTFHARILENNKQWDGY-------NFTPGSCSLTAYKLTPTGYEWGRA 37
            +PNELPQLSPQD+T HA+ILENNKQWDG        +FTPGSCSLTAYKLTP+GYEWGR 
Sbjct: 2203 QPNELPQLSPQDLTSHAKILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPSGYEWGRV 2262

Query: 36   NKDTGSNPHGYL 1
            NKDTGSNPHGYL
Sbjct: 2263 NKDTGSNPHGYL 2274


>ref|XP_003632761.1| PREDICTED: pre-mRNA-processing-splicing factor 8-like isoform 1
            [Vitis vinifera]
          Length = 2367

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/69 (94%), Positives = 67/69 (97%)
 Frame = -1

Query: 401  EPQMVLFNIYDDWLTSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS 222
            EPQMVLFNIYDDWL SISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS
Sbjct: 1943 EPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS 2002

Query: 221  LSDHQWVKV 195
            L+D QW+KV
Sbjct: 2003 LTDDQWMKV 2011



 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/72 (81%), Positives = 62/72 (86%), Gaps = 7/72 (9%)
 Frame = -3

Query: 195  KPNELPQLSPQDVTFHARILENNKQWDGY-------NFTPGSCSLTAYKLTPTGYEWGRA 37
            +PNELPQLSPQD+T HARILENNKQWDG        +FTPGSCSLTAYKLTPTGYEWGR 
Sbjct: 2213 QPNELPQLSPQDLTSHARILENNKQWDGEKCIILTCSFTPGSCSLTAYKLTPTGYEWGRV 2272

Query: 36   NKDTGSNPHGYL 1
            NKDTGSNPHGYL
Sbjct: 2273 NKDTGSNPHGYL 2284


>ref|XP_002973625.1| hypothetical protein SELMODRAFT_173603 [Selaginella moellendorffii]
            gi|300158663|gb|EFJ25285.1| hypothetical protein
            SELMODRAFT_173603 [Selaginella moellendorffii]
          Length = 2367

 Score =  137 bits (346), Expect = 7e-31
 Identities = 65/69 (94%), Positives = 67/69 (97%)
 Frame = -1

Query: 401  EPQMVLFNIYDDWLTSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS 222
            EPQMVLFNIYDDWL SISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS
Sbjct: 1943 EPQMVLFNIYDDWLKSISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIVTEPHHIWPS 2002

Query: 221  LSDHQWVKV 195
            L+D QW+KV
Sbjct: 2003 LTDDQWMKV 2011



 Score =  127 bits (318), Expect = 1e-27
 Identities = 59/72 (81%), Positives = 63/72 (87%), Gaps = 7/72 (9%)
 Frame = -3

Query: 195  KPNELPQLSPQDVTFHARILENNKQWDGY-------NFTPGSCSLTAYKLTPTGYEWGRA 37
            +PNELPQLSPQDVT HA+ILENNKQW+G        +FTPGSCSLTAYKLTPTGYEWGRA
Sbjct: 2213 QPNELPQLSPQDVTSHAKILENNKQWEGEKCIILTCSFTPGSCSLTAYKLTPTGYEWGRA 2272

Query: 36   NKDTGSNPHGYL 1
            NKDTGSNPHGYL
Sbjct: 2273 NKDTGSNPHGYL 2284


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