BLASTX nr result
ID: Atractylodes21_contig00001752
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00001752
(886 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002885474.1| CYCP2_1 [Arabidopsis lyrata subsp. lyrata] g... 144 4e-32
ref|XP_002515728.1| Nuc-1 negative regulatory protein preg, puta... 142 1e-31
ref|XP_002280596.1| PREDICTED: cyclin-U1-1 [Vitis vinifera] 142 1e-31
ref|NP_188825.1| cyclin-U1-1 [Arabidopsis thaliana] gi|75311211|... 141 2e-31
ref|XP_002310464.1| predicted protein [Populus trichocarpa] gi|2... 130 4e-28
>ref|XP_002885474.1| CYCP2_1 [Arabidopsis lyrata subsp. lyrata]
gi|297331314|gb|EFH61733.1| CYCP2_1 [Arabidopsis lyrata
subsp. lyrata]
Length = 210
Score = 144 bits (362), Expect = 4e-32
Identities = 77/117 (65%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
Frame = +2
Query: 26 MLAIADDDQKRLPEQSEP--DPATPRVLSILSVVLERLVNRNEMXXXXXXXXXXXKNLEA 199
ML +A DD+ EP + ATPRVL+I+S V+E+LV RNE K+LEA
Sbjct: 1 MLTVAGDDELDPVVGPEPPTEAATPRVLTIISHVMEKLVARNEWLAKQTTGFG--KSLEA 58
Query: 200 FHGVRSPAISIPKYLDRIYKYTNCSPACFVVGYVYIDRLVHRHPGSLVVSLNVHRLL 370
FHGVR+P+ISI KYL+RIYKYT CSPACFVVGYVYIDRL HRHPGSLVVSLNVHRLL
Sbjct: 59 FHGVRAPSISIAKYLERIYKYTKCSPACFVVGYVYIDRLAHRHPGSLVVSLNVHRLL 115
Score = 78.6 bits (192), Expect = 2e-12
Identities = 35/57 (61%), Positives = 48/57 (84%)
Frame = +1
Query: 505 FYARVGGVTNAELNRLEVELLFMLDFELTVTSRIFESYCLHLEREMMIWNGTTPKIE 675
FYARVGGV+NA+LN++E+ELLF+LDF +TV+ R+FESYC HLE+EM + NG ++
Sbjct: 135 FYARVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL-NGDVSSLK 190
>ref|XP_002515728.1| Nuc-1 negative regulatory protein preg, putative [Ricinus communis]
gi|223545165|gb|EEF46675.1| Nuc-1 negative regulatory
protein preg, putative [Ricinus communis]
Length = 230
Score = 142 bits (358), Expect = 1e-31
Identities = 70/116 (60%), Positives = 85/116 (73%), Gaps = 9/116 (7%)
Frame = +2
Query: 50 QKRLPEQSEPDPATPRVLSILSVVLERLVNRNE---------MXXXXXXXXXXXKNLEAF 202
Q R PE S+ + TPRVL+ILS V+E+LV RN+ + K+L AF
Sbjct: 11 QSRQPEPSQSEQTTPRVLTILSTVIEKLVTRNDRLVDGLSHRVDGMSSGLTHLGKSLNAF 70
Query: 203 HGVRSPAISIPKYLDRIYKYTNCSPACFVVGYVYIDRLVHRHPGSLVVSLNVHRLL 370
HGVR+P ISIPKYL+R+YKYTNCSP+CFVVGYVYIDRL+H+HP SLV+SLNVHRLL
Sbjct: 71 HGVRAPTISIPKYLERLYKYTNCSPSCFVVGYVYIDRLLHKHPDSLVISLNVHRLL 126
Score = 105 bits (262), Expect = 1e-20
Identities = 51/80 (63%), Positives = 68/80 (85%)
Frame = +1
Query: 505 FYARVGGVTNAELNRLEVELLFMLDFELTVTSRIFESYCLHLEREMMIWNGTTPKIESGI 684
FYA+VGGV+NAELNRLE+ELLF+LDF + V+SRIFESYCLHLE+EM++ +G KIE I
Sbjct: 146 FYAKVGGVSNAELNRLEIELLFLLDFGVMVSSRIFESYCLHLEKEMLL-HGAIQKIERTI 204
Query: 685 HTNTIEDIAEISVEDMESFS 744
+N+++D+ EI VEDM++ S
Sbjct: 205 PSNSLDDVTEILVEDMQNSS 224
>ref|XP_002280596.1| PREDICTED: cyclin-U1-1 [Vitis vinifera]
Length = 220
Score = 142 bits (357), Expect = 1e-31
Identities = 71/116 (61%), Positives = 87/116 (75%), Gaps = 2/116 (1%)
Frame = +2
Query: 29 LAIADD--DQKRLPEQSEPDPATPRVLSILSVVLERLVNRNEMXXXXXXXXXXXKNLEAF 202
+ +ADD D + PE + + TPRVL++L+ +ERLV RNE K+L F
Sbjct: 1 MLVADDVNDHRIRPEMTGVESTTPRVLAVLAFAMERLVARNE-GLVGESIGLMGKSLNVF 59
Query: 203 HGVRSPAISIPKYLDRIYKYTNCSPACFVVGYVYIDRLVHRHPGSLVVSLNVHRLL 370
HGVR+P+ISIPKYL+RIYKYTNCSP+CFVVGYVYIDRLVH+HP SLV+SLNVHRLL
Sbjct: 60 HGVRAPSISIPKYLERIYKYTNCSPSCFVVGYVYIDRLVHKHPDSLVISLNVHRLL 115
Score = 105 bits (261), Expect = 2e-20
Identities = 49/81 (60%), Positives = 68/81 (83%)
Frame = +1
Query: 505 FYARVGGVTNAELNRLEVELLFMLDFELTVTSRIFESYCLHLEREMMIWNGTTPKIESGI 684
FYARVGGV+NAELNRLE+ELLFMLDF + V+SR+FESYCL+LE+E M+WNG ++E +
Sbjct: 135 FYARVGGVSNAELNRLELELLFMLDFGVVVSSRVFESYCLYLEKE-MLWNGAGQRMERAM 193
Query: 685 HTNTIEDIAEISVEDMESFSS 747
N+++++ EISV+D ++ SS
Sbjct: 194 VPNSVDEVTEISVDDTQTSSS 214
>ref|NP_188825.1| cyclin-U1-1 [Arabidopsis thaliana]
gi|75311211|sp|Q9LJ45.1|CCU11_ARATH RecName:
Full=Cyclin-U1-1; Short=CycU1;1; AltName:
Full=Cyclin-P2.1; Short=CycP2;1
gi|9294285|dbj|BAB02187.1| PREG1-like negative
regulator-like protein [Arabidopsis thaliana]
gi|48310144|gb|AAT41762.1| At3g21870 [Arabidopsis
thaliana] gi|52627113|gb|AAU84683.1| At3g21870
[Arabidopsis thaliana] gi|332643040|gb|AEE76561.1|
cyclin-U1-1 [Arabidopsis thaliana]
Length = 210
Score = 141 bits (355), Expect = 2e-31
Identities = 75/117 (64%), Positives = 88/117 (75%), Gaps = 2/117 (1%)
Frame = +2
Query: 26 MLAIADDDQKR--LPEQSEPDPATPRVLSILSVVLERLVNRNEMXXXXXXXXXXXKNLEA 199
ML A DD+ + +S + ATPRVL+I+S V+E+LV RNE K+LEA
Sbjct: 1 MLTAAGDDELDPVVGPESATEAATPRVLTIISHVMEKLVARNEWLAKQTKGFG--KSLEA 58
Query: 200 FHGVRSPAISIPKYLDRIYKYTNCSPACFVVGYVYIDRLVHRHPGSLVVSLNVHRLL 370
FHGVR+P+ISI KYL+RIYKYT CSPACFVVGYVYIDRL H+HPGSLVVSLNVHRLL
Sbjct: 59 FHGVRAPSISIAKYLERIYKYTKCSPACFVVGYVYIDRLAHKHPGSLVVSLNVHRLL 115
Score = 78.2 bits (191), Expect = 2e-12
Identities = 33/48 (68%), Positives = 44/48 (91%)
Frame = +1
Query: 505 FYARVGGVTNAELNRLEVELLFMLDFELTVTSRIFESYCLHLEREMMI 648
FYARVGGV+NA+LN++E+ELLF+LDF +TV+ R+FESYC HLE+EM +
Sbjct: 135 FYARVGGVSNADLNKMELELLFLLDFRVTVSFRVFESYCFHLEKEMQL 182
>ref|XP_002310464.1| predicted protein [Populus trichocarpa] gi|222853367|gb|EEE90914.1|
predicted protein [Populus trichocarpa]
Length = 230
Score = 130 bits (327), Expect = 4e-28
Identities = 69/121 (57%), Positives = 83/121 (68%), Gaps = 12/121 (9%)
Frame = +2
Query: 44 DDQKRLPEQSEPDPA---TPRVLSILSVVLERLVNRNE---------MXXXXXXXXXXXK 187
D L QSEP P+ TPRVL+ILS V+E+LV RN+ + K
Sbjct: 6 DLTSNLSRQSEPSPSESTTPRVLTILSHVIEKLVARNDKLVDDMDKKLDGVSSGLARVGK 65
Query: 188 NLEAFHGVRSPAISIPKYLDRIYKYTNCSPACFVVGYVYIDRLVHRHPGSLVVSLNVHRL 367
+L FHGVR+P ISI KYL+R+YKYT+CSP+CFVVGYVYIDRL H+HP SLV+SLNVHRL
Sbjct: 66 SLNVFHGVRAPNISIVKYLERLYKYTSCSPSCFVVGYVYIDRLTHKHPDSLVISLNVHRL 125
Query: 368 L 370
L
Sbjct: 126 L 126
Score = 106 bits (264), Expect = 8e-21
Identities = 51/80 (63%), Positives = 66/80 (82%)
Frame = +1
Query: 505 FYARVGGVTNAELNRLEVELLFMLDFELTVTSRIFESYCLHLEREMMIWNGTTPKIESGI 684
FYARVGGV+NAELNRLE+E LF+LDF + V+SR+FESYC HLE+EMMI NG + +IE I
Sbjct: 146 FYARVGGVSNAELNRLEMEFLFLLDFGVVVSSRVFESYCSHLEKEMMI-NGASQRIERAI 204
Query: 685 HTNTIEDIAEISVEDMESFS 744
+N ++D+ E+SVED +S S
Sbjct: 205 VSNAVDDVTELSVEDTQSSS 224