BLASTX nr result

ID: Atractylodes21_contig00001639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001639
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   144   1e-32
gb|ABR67407.1| integrase [Cucumis melo subsp. melo]                   134   8e-30
gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   108   5e-22
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   108   5e-22
emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]         108   5e-22

>ref|XP_004149950.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           LOC101216349 [Cucumis sativus]
          Length = 1830

 Score =  144 bits (362), Expect = 1e-32
 Identities = 68/116 (58%), Positives = 90/116 (77%)
 Frame = +2

Query: 5   SQDLWSIEENGVNEPTNTAGLTPQQINELRENRKKDKKALYFIYQAVDEVIFERISASLS 184
           SQDLW I + G +EP +  GL+ QQ+NELR+ RKKDKKAL+FIYQ+VDE IFERIS   +
Sbjct: 31  SQDLWDIVDIGYSEPESENGLSAQQLNELRDARKKDKKALFFIYQSVDENIFERISGVST 90

Query: 185 SKEAWEMLYKTYRGEERV*TIRLQTLRCELDNLRMRDAESMEEFYNRVIALTNQMR 352
           +K AW+ L   Y GEE+V  +RLQTLR E D +RM+D+E++EEF+NRV+ + NQ+R
Sbjct: 91  AKAAWDALQNLYEGEEKVKLVRLQTLRAEFDTIRMKDSETIEEFFNRVLLIVNQLR 146


>gb|ABR67407.1| integrase [Cucumis melo subsp. melo]
          Length = 1281

 Score =  134 bits (337), Expect = 8e-30
 Identities = 64/116 (55%), Positives = 86/116 (74%)
 Frame = +2

Query: 5   SQDLWSIEENGVNEPTNTAGLTPQQINELRENRKKDKKALYFIYQAVDEVIFERISASLS 184
           SQ+LW I E G  E  N + LT QQ+ ELRENR KDKKAL+FIYQAVDE I ERIS + S
Sbjct: 33  SQELWDIVERGYTEVENQSELTNQQLVELRENRNKDKKALFFIYQAVDEFISERISTATS 92

Query: 185 SKEAWEMLYKTYRGEERV*TIRLQTLRCELDNLRMRDAESMEEFYNRVIALTNQMR 352
           +K AW++L  TY+GE++V  IRLQ LR E D ++M++ E++EEF+N ++ + N +R
Sbjct: 93  AKAAWDILRSTYQGEDKVKMIRLQALRSEFDCIKMKETETIEEFFNHILVIVNSLR 148


>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/116 (43%), Positives = 80/116 (68%)
 Frame = +2

Query: 5   SQDLWSIEENGVNEPTNTAGLTPQQINELRENRKKDKKALYFIYQAVDEVIFERISASLS 184
           + D+W I E G  EP N   L+  Q + LR++RK+DKKAL  IYQ +DE  FE++  + S
Sbjct: 31  AHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATS 90

Query: 185 SKEAWEMLYKTYRGEERV*TIRLQTLRCELDNLRMRDAESMEEFYNRVIALTNQMR 352
           +KEAWE L  +Y+G ++V  +RLQTLR E + L+M++ E + ++++RV+ +TN ++
Sbjct: 91  AKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLK 146


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
           gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
           polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/116 (43%), Positives = 80/116 (68%)
 Frame = +2

Query: 5   SQDLWSIEENGVNEPTNTAGLTPQQINELRENRKKDKKALYFIYQAVDEVIFERISASLS 184
           + D+W I E G  EP N   L+  Q + LR++RK+DKKAL  IYQ +DE  FE++  + S
Sbjct: 31  AHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATS 90

Query: 185 SKEAWEMLYKTYRGEERV*TIRLQTLRCELDNLRMRDAESMEEFYNRVIALTNQMR 352
           +KEAWE L  +Y+G ++V  +RLQTLR E + L+M++ E + ++++RV+ +TN ++
Sbjct: 91  AKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLK 146


>emb|CAA69271.1| lectin receptor kinase [Arabidopsis thaliana]
          Length = 544

 Score =  108 bits (270), Expect = 5e-22
 Identities = 50/116 (43%), Positives = 80/116 (68%)
 Frame = +2

Query: 5   SQDLWSIEENGVNEPTNTAGLTPQQINELRENRKKDKKALYFIYQAVDEVIFERISASLS 184
           + D+W I E G  EP N   L+  Q + LR++RK+DKKAL  IYQ +DE  FE++  + S
Sbjct: 47  AHDVWEIVEKGFIEPENEGSLSQTQKDGLRDSRKRDKKALCLIYQGLDEDTFEKVVEATS 106

Query: 185 SKEAWEMLYKTYRGEERV*TIRLQTLRCELDNLRMRDAESMEEFYNRVIALTNQMR 352
           +KEAWE L  +Y+G ++V  +RLQTLR E + L+M++ E + ++++RV+ +TN ++
Sbjct: 107 AKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDYFSRVLTVTNNLK 162


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