BLASTX nr result

ID: Atractylodes21_contig00001630 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001630
         (1406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-...   551   e-154
ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [...   538   e-150
emb|CBI31781.3| unnamed protein product [Vitis vinifera]              516   e-144
ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|2...   510   e-142
gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]        494   e-137

>ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
          Length = 1137

 Score =  551 bits (1420), Expect = e-154
 Identities = 294/470 (62%), Positives = 352/470 (74%), Gaps = 2/470 (0%)
 Frame = +1

Query: 1    AELLLGEPLSKLTEKFLVACAGPASNVRVERASRDRYADGGALAEVLSSYDKIGNSPLND 180
            AELLLG PLSK TEK L+A AGPASNVRVER SRD ++DGGALAEV+S Y+ +  +   D
Sbjct: 305  AELLLGYPLSKQTEKLLLAYAGPASNVRVERTSRDCFSDGGALAEVMSLYENLSENSRAD 364

Query: 181  NPQGEYVELEEKTKCHSAIEAIMAMPDLAVQALALTIDHLKQFGFERILFLGASFQPFSN 360
            +       +E++  C  AIE IM+MPDLAVQALALTI HLKQFG ERIL +GASF+PFS+
Sbjct: 365  HQVDNTEVMEQENHC-LAIEGIMSMPDLAVQALALTIRHLKQFGLERILCMGASFRPFSS 423

Query: 361  NVEMTLSANAIQQLEVLKXXXXXXXXXXXXXHMNHTLTISGSRLLRHWVSHPLRDRNMIN 540
            N+EMTLSANA+QQLEVL               MNHTLTI GSRLLRHWVSHPL D NMI+
Sbjct: 424  NMEMTLSANALQQLEVLNNHSDGSESGSLLHTMNHTLTIFGSRLLRHWVSHPLCDSNMIS 483

Query: 541  ARLDAISEILESMGSHNAYGD-RGYDGRDAAIASI-PKLHQLLTSILTNLGRLPDIQRGI 714
            ARLDA+SEI+ SMGS  A  +  G D  D+ +  + P+++ LL+S+LT LGR PDIQRG+
Sbjct: 484  ARLDAVSEIVMSMGSCKASQNFGGIDEGDSDVTYVQPEVNYLLSSVLTTLGRSPDIQRGL 543

Query: 715  TRIFHRTATAPEFIAVIQAILVSGKQLQQLHVEEEDKGDDVQAKTIHXXXXXXXXXXXXX 894
            TRIFHRTATA EFI+V QAIL +GKQLQ+LH+EE+D  +  Q++++              
Sbjct: 544  TRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQSRSVRSVLLRKLILTASS 603

Query: 895  XXXXXXXXXXXXXXNKEAAEQRDLPNLFVVSEGQFQEIATARTKVKQAKEKLDLLIGLYR 1074
                          NKEAA++ DLPNLF++S GQF E+A AR+ V+ AKEKLDLLIGLYR
Sbjct: 604  SGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQFPEVAKARSLVQSAKEKLDLLIGLYR 663

Query: 1075 KQLRNQKLEFMSVSGTTHLIELPLDVKVPSNWVKVNSTKKAIRYHAPEVLTALDHLSLAN 1254
            KQLR   LEFMSVSGTTHLIELP+DVKVPSNWVKVNSTKK +RYH PEVL+ALD LSLAN
Sbjct: 664  KQLRMNNLEFMSVSGTTHLIELPVDVKVPSNWVKVNSTKKTVRYHPPEVLSALDQLSLAN 723

Query: 1255 EELLLVCRSAWQNFLNEFGRYYSEFQGAVQALAALDCLHSLALLARNKDY 1404
            EEL++ CR AW +FL  F +Y+SEFQ AVQALA LDCLHSLA+L+RNK+Y
Sbjct: 724  EELMIACRGAWDSFLRAFDKYFSEFQAAVQALATLDCLHSLAILSRNKNY 773


>ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
            gi|223549918|gb|EEF51405.1| DNA mismatch repair protein
            MSH3, putative [Ricinus communis]
          Length = 1100

 Score =  538 bits (1385), Expect = e-150
 Identities = 288/470 (61%), Positives = 345/470 (73%), Gaps = 2/470 (0%)
 Frame = +1

Query: 1    AELLLGEPLSKLTEKFLVACAGPASNVRVERASRDRYADGGALAEVLSSYDKIGNSPLND 180
            AELLLG+PLSK TEK L+A AGP+SNVRVERAS   + DGGALAEV+  Y+ +G     D
Sbjct: 296  AELLLGDPLSKQTEKLLLAYAGPSSNVRVERASGHHFNDGGALAEVILLYENMGEHKAED 355

Query: 181  NPQGEYVELEEKTKCHSAIEAIMAMPDLAVQALALTIDHLKQFGFERILFLGASFQPFSN 360
            + + + +E   +   + AIE IM MPDLAVQALALTI HLKQFGFE+IL LGASF+P ++
Sbjct: 356  D-ENQMMERTHQDISYLAIEGIMNMPDLAVQALALTISHLKQFGFEQILRLGASFRPLTS 414

Query: 361  NVEMTLSANAIQQLEVLKXXXXXXXXXXXXXHMNHTLTISGSRLLRHWVSHPLRDRNMIN 540
            NVEM LSAN +QQLEVL+              MNHTLTISGSRLLRHWV+HPL DRNMI+
Sbjct: 415  NVEMNLSANTLQQLEVLRNNSNGSDSGSLFNIMNHTLTISGSRLLRHWVTHPLCDRNMIS 474

Query: 541  ARLDAISEILESMGSHNAYGDRG-YDGRDAAIASI-PKLHQLLTSILTNLGRLPDIQRGI 714
            ARLDA+SEI ESMGS+ A  + G +D  D+ +A I P  + LL+++L  LGR PDIQRGI
Sbjct: 475  ARLDAVSEIAESMGSYKALQNTGDFDEEDSDVAIIQPDFYHLLSTVLEMLGRSPDIQRGI 534

Query: 715  TRIFHRTATAPEFIAVIQAILVSGKQLQQLHVEEEDKGDDVQAKTIHXXXXXXXXXXXXX 894
            TRIFHRTATA EFIAVIQAIL++GKQL++L +EEE     VQAKT+              
Sbjct: 535  TRIFHRTATASEFIAVIQAILIAGKQLRRLQIEEEQNNKRVQAKTVRSVLLKKLILTVSS 594

Query: 895  XXXXXXXXXXXXXXNKEAAEQRDLPNLFVVSEGQFQEIATARTKVKQAKEKLDLLIGLYR 1074
                          NKEAAE  DL NL V+S GQF E+A++   V  AKEKLD LI LYR
Sbjct: 595  SSVVGHAAKLLSTLNKEAAEHGDLTNLIVISNGQFPEVASSNKAVHLAKEKLDSLINLYR 654

Query: 1075 KQLRNQKLEFMSVSGTTHLIELPLDVKVPSNWVKVNSTKKAIRYHAPEVLTALDHLSLAN 1254
            KQL+ + LEFMSVSGTTHLIELP DVKVP NWVK+NSTKK IRYH PEVLTALD L+LAN
Sbjct: 655  KQLKMRSLEFMSVSGTTHLIELPADVKVPLNWVKINSTKKMIRYHPPEVLTALDQLALAN 714

Query: 1255 EELLLVCRSAWQNFLNEFGRYYSEFQGAVQALAALDCLHSLALLARNKDY 1404
            EEL++VCR+AW +FL  F ++Y+EFQ  +QALAALDCLHSLA+L++NK+Y
Sbjct: 715  EELMVVCRAAWDSFLRSFAKHYAEFQAVIQALAALDCLHSLAILSKNKNY 764


>emb|CBI31781.3| unnamed protein product [Vitis vinifera]
          Length = 903

 Score =  516 bits (1330), Expect = e-144
 Identities = 285/488 (58%), Positives = 334/488 (68%), Gaps = 20/488 (4%)
 Frame = +1

Query: 1    AELLLGEPLSKLTEKFLVACAGPASNVRVERASRDRYADGGALAEVLSSYDKIGNSPLND 180
            AELLLG PLSK TEK L+A AGPASNVRVER SRD ++DGGALAEV+S Y+ +  +   D
Sbjct: 173  AELLLGYPLSKQTEKLLLAYAGPASNVRVERTSRDCFSDGGALAEVMSLYENLSENSRAD 232

Query: 181  NPQGEYVELEEKTKCHSAIE--------------------AIMAMPDLAVQALALTIDHL 300
            +       +E++  C  AIE                     IM+MPDLAVQALALTI HL
Sbjct: 233  HQVDNTEVMEQENHC-LAIEPPTTSYVKFVSVHYGSGIALGIMSMPDLAVQALALTIRHL 291

Query: 301  KQFGFERILFLGASFQPFSNNVEMTLSANAIQQLEVLKXXXXXXXXXXXXXHMNHTLTIS 480
            KQFG ERIL +GASF+PFS+N+EMTLSANA+QQLEVL               MNHTLTI 
Sbjct: 292  KQFGLERILCMGASFRPFSSNMEMTLSANALQQLEVLNNHSDGSESGSLLHTMNHTLTIF 351

Query: 481  GSRLLRHWVSHPLRDRNMINARLDAISEILESMGSHNAYGDRGYDGRDAAIASIPKLHQL 660
            GSRLLRHWVSHPL D NMI+ARLDA+SEI+ SMGS  A                      
Sbjct: 352  GSRLLRHWVSHPLCDSNMISARLDAVSEIVMSMGSCKAS--------------------- 390

Query: 661  LTSILTNLGRLPDIQRGITRIFHRTATAPEFIAVIQAILVSGKQLQQLHVEEEDKGDDVQ 840
                  N GR PDIQRG+TRIFHRTATA EFI+V QAIL +GKQLQ+LH+EE+D  +  Q
Sbjct: 391  -----QNFGRSPDIQRGLTRIFHRTATASEFISVTQAILFAGKQLQRLHIEEKDVDEKGQ 445

Query: 841  AKTIHXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEAAEQRDLPNLFVVSEGQFQEIATAR 1020
            ++++                            NKEAA++ DLPNLF++S GQF E+A AR
Sbjct: 446  SRSVRSVLLRKLILTASSSGIIGNAAKLLSTLNKEAADKGDLPNLFIISSGQFPEVAKAR 505

Query: 1021 TKVKQAKEKLDLLIGLYRKQLRNQKLEFMSVSGTTHLIELPLDVKVPSNWVKVNSTKKAI 1200
            + V+ AKEKLDLLIGLYRKQLR   LEFMSVSGTTHLIELP+DVKVPSNWVKVNSTKK +
Sbjct: 506  SLVQSAKEKLDLLIGLYRKQLRMNNLEFMSVSGTTHLIELPVDVKVPSNWVKVNSTKKTV 565

Query: 1201 RYHAPEVLTALDHLSLANEELLLVCRSAWQNFLNEFGRYYSEFQGAVQALAALDCLHSLA 1380
            RYH PEVL+ALD LSLANEEL++ CR AW +FL  F +Y+SEFQ AVQALA LDCLHSLA
Sbjct: 566  RYHPPEVLSALDQLSLANEELMIACRGAWDSFLRAFDKYFSEFQAAVQALATLDCLHSLA 625

Query: 1381 LLARNKDY 1404
            +L+RNK+Y
Sbjct: 626  ILSRNKNY 633


>ref|XP_002322465.1| predicted protein [Populus trichocarpa] gi|222869461|gb|EEF06592.1|
            predicted protein [Populus trichocarpa]
          Length = 1092

 Score =  510 bits (1313), Expect = e-142
 Identities = 283/497 (56%), Positives = 344/497 (69%), Gaps = 29/497 (5%)
 Frame = +1

Query: 1    AELLLGEPLSKLTEKFLVACAGPASNVRVERASRDRYADGGALAEVLSSYDKIGNSPLND 180
            AELLLG+PLSK TEK L+A +GP+SNVRVER SRD ++DGGALA+V+S Y+ +    L D
Sbjct: 280  AELLLGDPLSKQTEKLLLAYSGPSSNVRVERVSRDCFSDGGALADVMSLYENMIEDNLGD 339

Query: 181  NPQGEYVELEEKTKCHSAIEAIMAMPDLAVQALALTIDHLKQFGFERILFLGASFQPFSN 360
            N + +  + +E+  CH AIE ++ MPDLAV+ALALT+ HLKQFGF+R+L LGASF+PFS+
Sbjct: 340  NEK-QMTDAKEQGSCHLAIEGVIKMPDLAVEALALTVRHLKQFGFDRMLCLGASFRPFSS 398

Query: 361  NVEMTLSANAIQQLEVLKXXXXXXXXXXXXXHMNHTLTISGSRLLRHWVSHPLRDRNMIN 540
            N+EM LSAN +QQLEVL+              MNHTLTI GSRLLRHWV+HPL DRNMI+
Sbjct: 399  NMEMNLSANTLQQLEVLRNNSDGSESGSLLHIMNHTLTIYGSRLLRHWVTHPLCDRNMIS 458

Query: 541  ARLDAISEILESMG-SHNAYGDRGYDGRDAAIASI-PKLHQLLTSILTNLGRLPDIQRGI 714
            ARLDA+SEI E MG S ++      D  D+ +A + P L+ LL+++LT LGR PDI+RGI
Sbjct: 459  ARLDAVSEIAECMGFSKDSQRVSELDEDDSEVAIVQPDLYYLLSAVLTALGRSPDIERGI 518

Query: 715  TRIFHRTATAPEF---------------------------IAVIQAILVSGKQLQQLHVE 813
            TRIFHRTATA EF                           IAV QAIL +GKQL++L ++
Sbjct: 519  TRIFHRTATASEFLLMFLIMYLTYLSSFSSPIAVLVWLWFIAVFQAILAAGKQLKRLCIQ 578

Query: 814  EEDKGDDVQAKTIHXXXXXXXXXXXXXXXXXXXXXXXXXXXNKEAAEQRDLPNLFVVSEG 993
            EE   D V +KT+                            NKEAAEQ DL NL ++S+ 
Sbjct: 579  EEHNYDGVGSKTVKSVLLKRLILAASSSSVVGNAAKLLSTLNKEAAEQGDLTNLIIISDD 638

Query: 994  QFQEIATARTKVKQAKEKLDLLIGLYRKQLRNQKLEFMSVSGTTHLIELPLDVKVPSNWV 1173
            QF E+A AR  V+ AKEKLD LIGLYRKQL+ + LEFMSVSGTTHLIELPLD KVP NWV
Sbjct: 639  QFPEVARAREAVQFAKEKLDSLIGLYRKQLQMRNLEFMSVSGTTHLIELPLDFKVPLNWV 698

Query: 1174 KVNSTKKAIRYHAPEVLTALDHLSLANEELLLVCRSAWQNFLNEFGRYYSEFQGAVQALA 1353
            KVNSTKK IRYH PEVLTALD L LANEEL++V R+AW +FL  FG YY+EF+GAVQALA
Sbjct: 699  KVNSTKKMIRYHPPEVLTALDQLLLANEELMIVSRAAWDSFLRGFGIYYAEFRGAVQALA 758

Query: 1354 ALDCLHSLALLARNKDY 1404
             LDCL S A L +NK+Y
Sbjct: 759  TLDCLFSFATLLKNKNY 775


>gb|AAT67046.1| DNA mismatch repair protein [Petunia x hybrida]
          Length = 846

 Score =  494 bits (1271), Expect = e-137
 Identities = 268/468 (57%), Positives = 339/468 (72%)
 Frame = +1

Query: 1    AELLLGEPLSKLTEKFLVACAGPASNVRVERASRDRYADGGALAEVLSSYDKIGNSPLND 180
            AELL+G P+SK TEK L+A AGPASNVRVE  S DR++DGGAL+EV+S Y+ +  + L +
Sbjct: 40   AELLVGRPISKQTEKLLLAYAGPASNVRVEDVSSDRFSDGGALSEVMSLYEGVRENYLLN 99

Query: 181  NPQGEYVELEEKTKCHSAIEAIMAMPDLAVQALALTIDHLKQFGFERILFLGASFQPFSN 360
              + E  E++   +  SAI+ I+AMPDLAVQALAL I HLKQFG ER+L LGASF+PFS+
Sbjct: 100  VHEREEAEVKMHEQNQSAIQGILAMPDLAVQALALIIRHLKQFGMERVLCLGASFRPFSS 159

Query: 361  NVEMTLSANAIQQLEVLKXXXXXXXXXXXXXHMNHTLTISGSRLLRHWVSHPLRDRNMIN 540
            N+EMTLSANA+QQLEVLK              MN TLT+ GSRLLRHWV+HPLRDRNMI+
Sbjct: 160  NMEMTLSANALQQLEVLKNNFDGSESGSLMHCMNQTLTVFGSRLLRHWVTHPLRDRNMID 219

Query: 541  ARLDAISEILESMGSHNAYGDRGYDGRDAAIASIPKLHQLLTSILTNLGRLPDIQRGITR 720
            ARLDA++EI +SM +     D   +G D  I+  P++H L++S L++LGR PDIQRGITR
Sbjct: 220  ARLDAVAEIADSMKTCQT-SDLKVEGADVTISQ-PEIHHLISSALSSLGRSPDIQRGITR 277

Query: 721  IFHRTATAPEFIAVIQAILVSGKQLQQLHVEEEDKGDDVQAKTIHXXXXXXXXXXXXXXX 900
            IFHR ATA E   VIQAIL++ KQL QL +EE DK  ++Q +T+                
Sbjct: 278  IFHRNATASE---VIQAILIAAKQLHQLSLEE-DKSVNLQRQTLRSVLLRKLISIASSST 333

Query: 901  XXXXXXXXXXXXNKEAAEQRDLPNLFVVSEGQFQEIATARTKVKQAKEKLDLLIGLYRKQ 1080
                        NKEAA+ RDL NLF++S+G+F ++A  R +V+ A EKLD LI +YRKQ
Sbjct: 334  VINAAAKLLSALNKEAADSRDLHNLFMISDGKFPQVAEGRRRVELANEKLDSLIVVYRKQ 393

Query: 1081 LRNQKLEFMSVSGTTHLIELPLDVKVPSNWVKVNSTKKAIRYHAPEVLTALDHLSLANEE 1260
            L  + LE+ SV+G THLIELPLD KVP +WVKV+STKKAIRYH  EV+ ALD L+LANE+
Sbjct: 394  LHIRNLEYTSVAGITHLIELPLDTKVPPDWVKVSSTKKAIRYHPSEVVVALDELALANEQ 453

Query: 1261 LLLVCRSAWQNFLNEFGRYYSEFQGAVQALAALDCLHSLALLARNKDY 1404
            L ++CRSAW NFL  FG Y++EFQ AVQALA+LDCL+SLA+L+RNK+Y
Sbjct: 454  LTVICRSAWNNFLAGFGGYFAEFQAAVQALASLDCLNSLAILSRNKNY 501


Top