BLASTX nr result

ID: Atractylodes21_contig00001628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001628
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, ...   226   7e-57
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com...   213   6e-53
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]      211   1e-52
ref|XP_002298632.1| predicted protein [Populus trichocarpa] gi|2...   210   4e-52
ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana...   209   7e-52

>sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, chloroplastic; AltName:
           Full=CL27; Flags: Precursor gi|170306|gb|AAA34104.1|
           ribosomal protein L27 [Nicotiana tabacum]
           gi|170326|gb|AAA34115.1| ribosomal protein L27
           [Nicotiana tabacum]
          Length = 179

 Score =  226 bits (575), Expect = 7e-57
 Identities = 112/152 (73%), Positives = 125/152 (82%)
 Frame = +1

Query: 82  ALSFNLVGAXXXXXXXXXXXXXXXXXXXXXXPTARKSSISLPLRTPLTIQNAHKKGAGST 261
           A+SF+LVGA                      P A K S+S PL++PLTI++AHKKGAGST
Sbjct: 2   AVSFSLVGAFKGLSLASSSSFLKGDFGAAF-PVAPKFSVSFPLKSPLTIESAHKKGAGST 60

Query: 262 KNGRDSPGQRLGVKIYGDQLAKPGAIIIRQRGTKVHPGKNVGIGKDHTIFSLIDGLVKFE 441
           KNGRDSPGQRLGVKI+GDQ+AKPG+II+RQRGTK HPGKNVG+GKDHTIFSLIDGLVKFE
Sbjct: 61  KNGRDSPGQRLGVKIFGDQVAKPGSIIVRQRGTKFHPGKNVGLGKDHTIFSLIDGLVKFE 120

Query: 442 KFGPDRKKVSVYPREVQPENPNSYRNRKRESF 537
           KFGPDRKK+SVYPREVQPENPNSYRNRKRESF
Sbjct: 121 KFGPDRKKISVYPREVQPENPNSYRNRKRESF 152


>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
           gi|223549405|gb|EEF50893.1| ribosomal protein L27,
           putative [Ricinus communis]
          Length = 195

 Score =  213 bits (541), Expect = 6e-53
 Identities = 116/184 (63%), Positives = 129/184 (70%), Gaps = 2/184 (1%)
 Frame = +1

Query: 67  MAAATALSFNLVGAXXXXXXXXXXXXXXXXXXXXXXPTARKSSISLPLRTP--LTIQNAH 240
           +A A A+SFNL+G                        +  ++ +SLPL+ P  LTI+ AH
Sbjct: 4   IATAGAISFNLIGTFKGLSLSSSSSFFKGDTTLNL--SLSRNCVSLPLKAPFPLTIEMAH 61

Query: 241 KKGAGSTKNGRDSPGQRLGVKIYGDQLAKPGAIIIRQRGTKVHPGKNVGIGKDHTIFSLI 420
           KKGAGSTKNGRDSPGQRLGVKI+G+Q AKPGAII+RQRGTK HPGKNVG+GKDHTIFSLI
Sbjct: 62  KKGAGSTKNGRDSPGQRLGVKIFGNQAAKPGAIIVRQRGTKFHPGKNVGLGKDHTIFSLI 121

Query: 421 DGLVKFEKFGPDRKKVSVYPREVQPENPNSYRNRKRESFXXXXXXXXXXXXXXXGTAAEP 600
           DGLVKFEKFGPDRKKVSVYPREVQPENPNSYR RKRE F               G  AEP
Sbjct: 122 DGLVKFEKFGPDRKKVSVYPREVQPENPNSYRARKREYF---RLQRERKKARKEGLIAEP 178

Query: 601 LLVL 612
            LVL
Sbjct: 179 QLVL 182


>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 197

 Score =  211 bits (538), Expect = 1e-52
 Identities = 115/186 (61%), Positives = 125/186 (67%), Gaps = 6/186 (3%)
 Frame = +1

Query: 73  AATALSFNLVGAXXXXXXXXXXXXXXXXXXXXXXPTARKSSISLPLRTP------LTIQN 234
           A  A+SFNL+G+                          KSS  LP + P      LTIQ 
Sbjct: 2   ALMAVSFNLIGSFKGLSLSSSSSSSFFKGDAGSLKFGLKSSALLPFKAPVKAPLPLTIQM 61

Query: 235 AHKKGAGSTKNGRDSPGQRLGVKIYGDQLAKPGAIIIRQRGTKVHPGKNVGIGKDHTIFS 414
           AHKKGAGSTKNGRDS G+RLGVKIYGDQ AKPGAII+RQRGTK HPGKNVGIGKDHTIFS
Sbjct: 62  AHKKGAGSTKNGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKFHPGKNVGIGKDHTIFS 121

Query: 415 LIDGLVKFEKFGPDRKKVSVYPREVQPENPNSYRNRKRESFXXXXXXXXXXXXXXXGTAA 594
           LIDGLVKFEKFGPDRKK+SVYPRE+QPENPNSYR RKRE+F               G  A
Sbjct: 122 LIDGLVKFEKFGPDRKKISVYPREIQPENPNSYRARKRENF---RLQRERKKARKEGIVA 178

Query: 595 EPLLVL 612
           +P LVL
Sbjct: 179 QPQLVL 184


>ref|XP_002298632.1| predicted protein [Populus trichocarpa] gi|222845890|gb|EEE83437.1|
           predicted protein [Populus trichocarpa]
          Length = 176

 Score =  210 bits (534), Expect = 4e-52
 Identities = 108/158 (68%), Positives = 117/158 (74%), Gaps = 6/158 (3%)
 Frame = +1

Query: 82  ALSFNLVGAXXXXXXXXXXXXXXXXXXXXXXPTARKSSISLPLRTP------LTIQNAHK 243
           A+SFNL+G+                          KSS  LP + P      LTIQ AHK
Sbjct: 2   AVSFNLIGSFKGLSLSSSSSSSFFKGDVGSLKFGLKSSALLPFKAPVKAPLPLTIQMAHK 61

Query: 244 KGAGSTKNGRDSPGQRLGVKIYGDQLAKPGAIIIRQRGTKVHPGKNVGIGKDHTIFSLID 423
           KGAGSTKNGRDS G+RLGVKIYGDQ AKPGAII+RQRGTK HPGKNVGIGKDHTIFSLID
Sbjct: 62  KGAGSTKNGRDSKGKRLGVKIYGDQAAKPGAIIVRQRGTKFHPGKNVGIGKDHTIFSLID 121

Query: 424 GLVKFEKFGPDRKKVSVYPREVQPENPNSYRNRKRESF 537
           GLVKFEKFGPDRKK+SVYPRE+QPENPNSYR RKRE+F
Sbjct: 122 GLVKFEKFGPDRKKISVYPREIQPENPNSYRARKRENF 159


>ref|NP_198911.1| 50S ribosomal protein L27 [Arabidopsis thaliana]
           gi|20139726|sp|Q9FLN4.1|RK27_ARATH RecName: Full=50S
           ribosomal protein L27, chloroplastic; AltName:
           Full=CL27; Flags: Precursor gi|189096146|pdb|3BBO|X
           Chain X, Homology Model For The Spinach Chloroplast 50s
           Subunit Fitted To 9.4a Cryo-Em Map Of The 70s
           Chlororibosome gi|9759141|dbj|BAB09697.1| 50S ribosomal
           protein L27 [Arabidopsis thaliana]
           gi|15028249|gb|AAK76713.1| putative 50S ribosomal
           protein L27 [Arabidopsis thaliana]
           gi|21436345|gb|AAM51342.1| putative 50S ribosomal
           protein L27 [Arabidopsis thaliana]
           gi|332007235|gb|AED94618.1| 50S ribosomal protein L27
           [Arabidopsis thaliana]
          Length = 198

 Score =  209 bits (532), Expect = 7e-52
 Identities = 108/162 (66%), Positives = 122/162 (75%), Gaps = 5/162 (3%)
 Frame = +1

Query: 67  MAAATALSFNLVGAXXXXXXXXXXXXXXXXXXXXXXPTARKSSISLPLRT-----PLTIQ 231
           MA AT++S NL+GA                       +    +++LPL       PLTI+
Sbjct: 1   MAMATSMSLNLIGAFKGLSLSSTSSFLRGDLSFSPKTSF---TVTLPLENLQAPIPLTIE 57

Query: 232 NAHKKGAGSTKNGRDSPGQRLGVKIYGDQLAKPGAIIIRQRGTKVHPGKNVGIGKDHTIF 411
           +AHKKGAGSTKNGRDSPGQRLGVKIYGDQ+AKPGAII+RQRGTK H GKNVGIGKDHTIF
Sbjct: 58  SAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAKPGAIIVRQRGTKFHAGKNVGIGKDHTIF 117

Query: 412 SLIDGLVKFEKFGPDRKKVSVYPREVQPENPNSYRNRKRESF 537
           SLIDGLVKFEKFGPDRKK+SVYPRE+ PENPNSYR RKRE+F
Sbjct: 118 SLIDGLVKFEKFGPDRKKISVYPREIVPENPNSYRARKRENF 159


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