BLASTX nr result
ID: Atractylodes21_contig00001605
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00001605
(2296 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation spec... 639 0.0
ref|XP_002523201.1| conserved hypothetical protein [Ricinus comm... 632 e-178
ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation spec... 595 e-167
ref|XP_002300333.1| predicted protein [Populus trichocarpa] gi|2... 582 e-163
ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation spec... 581 e-163
>ref|XP_002281594.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Vitis vinifera]
Length = 673
Score = 639 bits (1649), Expect = 0.0
Identities = 361/637 (56%), Positives = 389/637 (61%), Gaps = 18/637 (2%)
Frame = -2
Query: 2160 GRRSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNED 1981
GRRS+RQTVCRHWLRSLCMKG+ACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHTNED
Sbjct: 56 GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNED 115
Query: 1980 IKECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQQLTSYNYGNSNRFFQNRNAN 1801
IKECNMYKLGFCPNG DCRYRHAKLPGPPP++EEV QKIQQL+S+NYG+SNRF+QNRN
Sbjct: 116 IKECNMYKLGFCPNGSDCRYRHAKLPGPPPTMEEVFQKIQQLSSFNYGSSNRFYQNRNP- 174
Query: 1800 HSQQSEKFQFPQGNNDMN--QVTKPTTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1627
++QQ+EK Q QG+N +N V K +TT+
Sbjct: 175 YNQQTEKSQILQGSNAVNLGTVAKSSTTEAINVQQQQVQPPQQQVSQTPMQNLPNGLPNQ 234
Query: 1626 XXXXXXXXXXXXXNKTSIPLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA 1447
KT+ PLPQG SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA
Sbjct: 235 AN------------KTASPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEA 282
Query: 1446 FDSVENVILIFSVNRTRHFQGCAKMTSKTGGSVGGGNWKYEHGTAHYGRNFCVRWLKLCE 1267
FDSVENVILIFSVNRTRHFQGCAKMTSK GG VGGGNWKY HGTAHYGRNF V+WLKLCE
Sbjct: 283 FDSVENVILIFSVNRTRHFQGCAKMTSKIGGFVGGGNWKYAHGTAHYGRNFSVKWLKLCE 342
Query: 1266 LSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISXXXXXXXX 1087
LSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAIS
Sbjct: 343 LSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISLAAESKRE 402
Query: 1086 XXXXKGVNPENASENPDIVPXXXXXXXXXXXXXXXXXXXEQGFGLAAQXXXXXXGMIWXX 907
KGVNP+N ENPDIVP Q G AAQ G++W
Sbjct: 403 EEKAKGVNPDNGGENPDIVPFEDNEEEEEEESEEEEESFGQALGPAAQGRGRGRGIMWPP 462
Query: 906 XXXXXXXXXXXXXXXXXXXXMNMMGGDGFSYXXXXXXXXXXXDLLNMXXXXXXXXXXXFS 727
MMG DGFSY D+ + FS
Sbjct: 463 HMPLARGARPIPSMRGFPPV--MMGADGFSYSAVPPDGFAMPDIFGVGPRAFPPYGPRFS 520
Query: 726 GDFQRPPFSGMMFHGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPV 547
GDF P SGMMF GR RPV
Sbjct: 521 GDFTGPA-SGMMFPGR---GQPGAVFPASGYGMMMGPGRAPFMGGMGVPAAAPTRAGRPV 576
Query: 546 YXXXXXXXXXXQNT--SRPKRDQM--ALGGNDRYSGGGSQPMGQDIGRPDDEAQP----- 394
N+ +R KRDQ NDRYSGG Q GQD+ PDDE Q
Sbjct: 577 GMPPMFPPPPPPNSQNNRTKRDQRTPVNDRNDRYSGGSDQGRGQDMAGPDDETQYLQGLK 636
Query: 393 -------GAETTFKNGESESEDEAPRRSRHGEGKKKR 304
G +F+N ESESEDEAPRRSRHGEGKKKR
Sbjct: 637 SQQDDQFGGGNSFRNDESESEDEAPRRSRHGEGKKKR 673
>ref|XP_002523201.1| conserved hypothetical protein [Ricinus communis]
gi|223537608|gb|EEF39232.1| conserved hypothetical
protein [Ricinus communis]
Length = 702
Score = 632 bits (1631), Expect = e-178
Identities = 356/647 (55%), Positives = 379/647 (58%), Gaps = 15/647 (2%)
Frame = -2
Query: 2163 SGRRSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNE 1984
+GRRS+RQTVCRHWLRSLCMKG+ACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHTNE
Sbjct: 68 AGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNE 127
Query: 1983 DIKECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQQLTSYNYGNSNRFFQNRNA 1804
DIKECNMYKLGFCPNGPDCRYRHAKLPGPPP VEEVLQKIQQL SYNYG+SN+FFQ R A
Sbjct: 128 DIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVLQKIQQLNSYNYGSSNKFFQQRGA 187
Query: 1803 NHSQQSEKFQFPQGNNDMNQ--VTKPTTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1630
Q ++K QF QG N+M Q KP T+
Sbjct: 188 GFQQHADKSQFSQGPNNMGQGMAAKPPGTESANVQQPQQQQPQPGQGQQSQQQATQTPTQ 247
Query: 1629 XXXXXXXXXXXXXXNKTSIPLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 1450
+T+IPLPQG SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE
Sbjct: 248 NLPNGQPNQAN----RTAIPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNE 303
Query: 1449 AFDSVENVILIFSVNRTRHFQGCAKMTSKTGGSVGGGNWKYEHGTAHYGRNFCVRWLKLC 1270
AFDS ENVILIFSVNRTRHFQGCAKMTSK G SVGGGNWKY HGTAHYGRNF V+WLKLC
Sbjct: 304 AFDSAENVILIFSVNRTRHFQGCAKMTSKIGASVGGGNWKYAHGTAHYGRNFSVKWLKLC 363
Query: 1269 ELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISXXXXXXX 1090
ELSFHKTRHLRNPYNENLPVKISRDCQELEPS+G QLA LLY EPDSELMAIS
Sbjct: 364 ELSFHKTRHLRNPYNENLPVKISRDCQELEPSVGGQLACLLYDEPDSELMAISLAAEAKR 423
Query: 1089 XXXXXKGVNPENASENPDIVPXXXXXXXXXXXXXXXXXXXEQGFGLAAQXXXXXXGMIWX 910
KGVNPEN +NPDIVP Q G Q G+IW
Sbjct: 424 EEEKAKGVNPENGGDNPDIVPFEDNEEEEEEESEEEEESFGQALGAPGQGRGRGRGIIWP 483
Query: 909 XXXXXXXXXXXXXXXXXXXXXMNMMGGDGFSYXXXXXXXXXXXDLLNMXXXXXXXXXXXF 730
MMG D FSY DL + F
Sbjct: 484 HMPLARGARPIPGMRGFPPM---MMGADSFSYGPVTPDGFGMPDLFGVAPRGFTPYAPRF 540
Query: 729 SGDFQRPPFSGMMFHGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRP 550
SGDF SGMMF GR
Sbjct: 541 SGDFTGAA-SGMMFPGRPPQPGGVFPNGGFGMMMGPGRAPFMGGMGPNSTNPLRGNWPGG 599
Query: 549 VYXXXXXXXXXXQNTSRPKRDQMALGGNDRYSGGGSQPMGQDIGRPDDEA---------- 400
+ + R +R + NDRYS G Q G PDDEA
Sbjct: 600 MPFPPLPTPSPQRPVKRDQR----MTANDRYSTGSDQGR-NTAGEPDDEARYQQEGLKAS 654
Query: 399 ---QPGAETTFKNGESESEDEAPRRSRHGEGKKKRRSSEGDAATTSD 268
Q GA +F+N ESESEDEAPRRSRHGEGKKKRR SEGDA SD
Sbjct: 655 HEDQFGAGNSFRNDESESEDEAPRRSRHGEGKKKRRGSEGDATPGSD 701
>ref|XP_004141524.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Cucumis sativus]
Length = 707
Score = 595 bits (1533), Expect = e-167
Identities = 345/652 (52%), Positives = 375/652 (57%), Gaps = 22/652 (3%)
Frame = -2
Query: 2157 RRSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNEDI 1978
RRS+RQTVCRHWLRSLCMKG+ACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNEDI
Sbjct: 72 RRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNEDI 131
Query: 1977 KECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQQLTSYNYGNSNRFFQNRNANH 1798
KECNMYK GFCPNGPDCRYRHAKLPGPPP +EE+LQKIQ L SYNYG SN+FF R
Sbjct: 132 KECNMYKFGFCPNGPDCRYRHAKLPGPPPPLEEILQKIQHLGSYNYGPSNKFFTQRGVGL 191
Query: 1797 SQQSEKFQFPQGNNDMNQ--VTKPTTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1624
SQQ+EK QFPQ + Q KP+ +
Sbjct: 192 SQQNEKSQFPQVPALVTQGVTGKPSAAESVNVQQQQGQQSAPQASQTPVQSLSNGQPNQL 251
Query: 1623 XXXXXXXXXXXXNKTSIPLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 1444
+ + LPQG SRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF
Sbjct: 252 N------------RNATSLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAF 299
Query: 1443 DSVENVILIFSVNRTRHFQGCAKMTSKTGGSVGGGNWKYEHGTAHYGRNFCVRWLKLCEL 1264
DS +NVILIFSVNRTRHFQGCAKM S+ GGSV GGNWKY HGT HYG+NF ++WLKLCEL
Sbjct: 300 DSADNVILIFSVNRTRHFQGCAKMMSRIGGSVSGGNWKYAHGTPHYGQNFSLKWLKLCEL 359
Query: 1263 SFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISXXXXXXXXX 1084
SF KTRHLRNPYNENLPVKISRDCQELEPS+GEQLASLLYLEPD ELMA+S
Sbjct: 360 SFQKTRHLRNPYNENLPVKISRDCQELEPSVGEQLASLLYLEPDGELMAVSVAAESKREE 419
Query: 1083 XXXKGVNPENASENPDIVP-XXXXXXXXXXXXXXXXXXXEQGFGLAAQXXXXXXGMIWXX 907
KGVNP+ SENPDIVP Q GL Q GM+W
Sbjct: 420 EKAKGVNPDIGSENPDIVPFEDNEEEEEEESEEEEEESFGQSAGLPPQGRGRGRGMMW-- 477
Query: 906 XXXXXXXXXXXXXXXXXXXXMNMMGGDGFSYXXXXXXXXXXXDLLNM--XXXXXXXXXXX 733
MMG DG SY D+ M
Sbjct: 478 PPHMPMGRGARPFHGMQGFPPGMMGPDGLSYGPVTPDGFPMPDIFGMTPRGFGPYGPTPR 537
Query: 732 FSGDFQRPPFSGMMFHGR---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 562
FSGDF PP + MMF GR
Sbjct: 538 FSGDFMGPP-TAMMFRGRPSQPAAMFPPSGFGMMMGQGRGPFMGGMGVAGANPARPGRPV 596
Query: 561 XXRPVYXXXXXXXXXXQNTSRPKRDQMALGGNDRYSGGGSQPMGQDI---GRPDD----- 406
P+Y N + KRDQ L NDRY G Q G +I GR ++
Sbjct: 597 GVSPLYPPPAVPSSQNMNRA-IKRDQRGL-TNDRYIVGMDQNKGVEIQSSGRDEEMQYKQ 654
Query: 405 ------EAQPGAETTFKNGESESEDEAPRRSRHGEGKKKRRSSEGDAATTSD 268
+ Q G TTF+N ESESEDEAPRRSRHGEGKKKRR SEGDA S+
Sbjct: 655 GSKAYSDEQYGTGTTFRNEESESEDEAPRRSRHGEGKKKRRGSEGDATAISN 706
>ref|XP_002300333.1| predicted protein [Populus trichocarpa] gi|222847591|gb|EEE85138.1|
predicted protein [Populus trichocarpa]
Length = 669
Score = 582 bits (1500), Expect = e-163
Identities = 338/643 (52%), Positives = 363/643 (56%), Gaps = 11/643 (1%)
Frame = -2
Query: 2163 SGRRSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNE 1984
+GRRS+RQTVCRHWLRSLCMKG+ACGFLHQYDKSRMP+CRFFRLYGECREQDCVYKHTNE
Sbjct: 65 AGRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKSRMPVCRFFRLYGECREQDCVYKHTNE 124
Query: 1983 DIKECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQQLTSYNYGNSNRFFQNRNA 1804
DIKECNMYKLGFCPNGPDCRYRHAKLPGPPP VEEV+QKIQQL SYN SN+ FQ RNA
Sbjct: 125 DIKECNMYKLGFCPNGPDCRYRHAKLPGPPPPVEEVVQKIQQLNSYNGVTSNKNFQQRNA 184
Query: 1803 NHSQQSEKFQFPQGNNDMNQVTKPTTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1624
SQQ EK N + KP+ T+
Sbjct: 185 GFSQQIEK--------SPNTIIKPSGTESANVQQQQQQQQQTQTPHLTNGQHQQPQQPNP 236
Query: 1623 XXXXXXXXXXXXNKTSIPLPQGTSR-----------YFIVKSCNRENLELSVQQGVWATQ 1477
+ + PLPQG S YFIVKSCNRENLELSVQQGVWATQ
Sbjct: 237 LN-----------RIATPLPQGISSFFSCVSPSQFVYFIVKSCNRENLELSVQQGVWATQ 285
Query: 1476 RSNEAKLNEAFDSVENVILIFSVNRTRHFQGCAKMTSKTGGSVGGGNWKYEHGTAHYGRN 1297
RSNE KLNEA DS +NVILIFSVNRTRHFQGCAKM SK G SVGGGNWKY HGTAHYGRN
Sbjct: 286 RSNEIKLNEALDSADNVILIFSVNRTRHFQGCAKMASKIGASVGGGNWKYAHGTAHYGRN 345
Query: 1296 FCVRWLKLCELSFHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMA 1117
F V+WLKLCELSFHKTRHLRNP+NENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMA
Sbjct: 346 FSVKWLKLCELSFHKTRHLRNPFNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMA 405
Query: 1116 ISXXXXXXXXXXXXKGVNPENASENPDIVPXXXXXXXXXXXXXXXXXXXEQGFGLAAQXX 937
+S KGVNP++ ENPDIVP Q G AAQ
Sbjct: 406 VSLAAEAKREEEKEKGVNPDSGGENPDIVPFEDNEEEEEEESEEEEESFGQPLGPAAQGR 465
Query: 936 XXXXGMIWXXXXXXXXXXXXXXXXXXXXXXMNMMGGDGFSYXXXXXXXXXXXDLLNMXXX 757
GM+W MMG DGFSY DL +
Sbjct: 466 GRGRGMMWPSHNPMARGARPIPGIRGFPPM--MMGADGFSYGAVTPDSFGMPDLFGVASR 523
Query: 756 XXXXXXXXFSGDFQRPPFSGMMFHGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 577
FSGDF SGMMF GR
Sbjct: 524 GFPPYGPRFSGDFTGAA-SGMMFPGRPSQPGAVFPAGGFGMMMGPGRPPFIGGMGPTPSN 582
Query: 576 XXXXXXXRPVYXXXXXXXXXXQNTSRPKRDQMALGGNDRYSGGGSQPMGQDIGRPDDEAQ 397
++ N+ KRDQ A ND R D Q
Sbjct: 583 LLRGPRPGGMF-SPFPAPSSQNNSRSVKRDQRA-AAND---------------RNDRHNQ 625
Query: 396 PGAETTFKNGESESEDEAPRRSRHGEGKKKRRSSEGDAATTSD 268
GA + +N ESESEDEAPRRSRHGEGKKKRR S DA S+
Sbjct: 626 FGAVNSIRNDESESEDEAPRRSRHGEGKKKRRGSGDDATPGSE 668
>ref|XP_003534764.1| PREDICTED: cleavage and polyadenylation specificity factor
CPSF30-like [Glycine max]
Length = 681
Score = 581 bits (1497), Expect = e-163
Identities = 306/494 (61%), Positives = 325/494 (65%)
Frame = -2
Query: 2160 GRRSYRQTVCRHWLRSLCMKGEACGFLHQYDKSRMPICRFFRLYGECREQDCVYKHTNED 1981
GRRS+RQTVCRHWLRSLCMKG+ACGFLHQYDK+RMP+CRFFRLYGECREQDCVYKHTNED
Sbjct: 66 GRRSFRQTVCRHWLRSLCMKGDACGFLHQYDKARMPVCRFFRLYGECREQDCVYKHTNED 125
Query: 1980 IKECNMYKLGFCPNGPDCRYRHAKLPGPPPSVEEVLQKIQQLTSYNYGNSNRFFQNRNAN 1801
IKECNMYKLGFCPNGPDCRYRHAK PGPPP VEEVLQKIQ L SYNY +SN+FFQ R A+
Sbjct: 126 IKECNMYKLGFCPNGPDCRYRHAKSPGPPPPVEEVLQKIQHLYSYNYNSSNKFFQQRGAS 185
Query: 1800 HSQQSEKFQFPQGNNDMNQVTKPTTTDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1621
++QQ+EK PQGNN NQ
Sbjct: 186 YNQQAEKPLLPQGNNSTNQ---------GVTGNPLPAELGNAQPQQQVQQSQQQVNQSQM 236
Query: 1620 XXXXXXXXXXXNKTSIPLPQGTSRYFIVKSCNRENLELSVQQGVWATQRSNEAKLNEAFD 1441
N+T+ PLPQG SRYFIVKSCNRENLELSVQQGVWATQRSNE+KLNEAFD
Sbjct: 237 QNVANGQPNQANRTATPLPQGISRYFIVKSCNRENLELSVQQGVWATQRSNESKLNEAFD 296
Query: 1440 SVENVILIFSVNRTRHFQGCAKMTSKTGGSVGGGNWKYEHGTAHYGRNFCVRWLKLCELS 1261
SVENVILIFSVNRTRHFQGCAKMTSK GGSV GGNWKY HGTAHYGRNF V+WLKLCELS
Sbjct: 297 SVENVILIFSVNRTRHFQGCAKMTSKIGGSVAGGNWKYAHGTAHYGRNFSVKWLKLCELS 356
Query: 1260 FHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISXXXXXXXXXX 1081
FHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAIS
Sbjct: 357 FHKTRHLRNPYNENLPVKISRDCQELEPSIGEQLASLLYLEPDSELMAISVAAESKREEE 416
Query: 1080 XXKGVNPENASENPDIVPXXXXXXXXXXXXXXXXXXXEQGFGLAAQXXXXXXGMIWXXXX 901
KGVNP+N ENPDIVP G G A Q GM+W
Sbjct: 417 KAKGVNPDNGGENPDIVPFEDNEEEEEEESDEEEESFGHGVGPAGQGRGRGRGMMWPPHM 476
Query: 900 XXXXXXXXXXXXXXXXXXMNMMGGDGFSYXXXXXXXXXXXDLLNMXXXXXXXXXXXFSGD 721
+M GDG SY DL + FSGD
Sbjct: 477 PLGRGARPMPGMQGFNP---VMMGDGLSYGPVGPDGFGMPDLFGVGPRGFAPYGPRFSGD 533
Query: 720 FQRPPFSGMMFHGR 679
F PP + MMF GR
Sbjct: 534 FGGPP-AAMMFRGR 546
Score = 62.0 bits (149), Expect = 7e-07
Identities = 36/75 (48%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
Frame = -2
Query: 495 KRDQMALGGNDRYSGGGSQPMGQDI----GRPDDEAQPGAETTFKNGE------SESEDE 346
KRDQ NDR+ G Q QD+ G PDD+ P + +K + SESEDE
Sbjct: 608 KRDQRTADRNDRFGSGSEQGKSQDMLSQSGGPDDD--PQYQQGYKGNQDDHPDDSESEDE 665
Query: 345 APRRSRHGEGKKKRR 301
APRRSRHGEGKKK +
Sbjct: 666 APRRSRHGEGKKKHK 680