BLASTX nr result

ID: Atractylodes21_contig00001583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001583
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16290.3| unnamed protein product [Vitis vinifera]              119   5e-25
ref|XP_002285035.1| PREDICTED: protein transport protein Sec61 s...   117   2e-24
ref|XP_003543483.1| PREDICTED: protein transport protein Sec61 s...   115   1e-23
ref|XP_003540170.1| PREDICTED: protein transport protein Sec61 s...   115   1e-23
ref|XP_002276029.1| PREDICTED: protein transport protein Sec61 s...   114   2e-23

>emb|CBI16290.3| unnamed protein product [Vitis vinifera]
          Length = 699

 Score =  119 bits (298), Expect = 5e-25
 Identities = 68/132 (51%), Positives = 80/132 (60%)
 Frame = +2

Query: 17  LPRVQNHALSLSLSLIHFRFLELSPLRSAATMARGXXXXXXXXXXXXXRPGPVGVIPRGS 196
           LP+   H   + + L +     L  L  + +MARG             RPGPVG+ PRG+
Sbjct: 562 LPQPTLHQHEIDVILKYPWKFHLITLLHSTSMARGSSQSQASTTATS-RPGPVGMAPRGT 620

Query: 197 PAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPTVVLVMSVCFIGF 376
            AATAGMRRRR+G                  MLRFYTDDAPG+KITPTVVLVMS+CFIGF
Sbjct: 621 AAATAGMRRRRVGGGSGGSSSGYGGGGSGSNMLRFYTDDAPGLKITPTVVLVMSLCFIGF 680

Query: 377 VTALHVFGKLYR 412
           VTALHVFGK+YR
Sbjct: 681 VTALHVFGKIYR 692


>ref|XP_002285035.1| PREDICTED: protein transport protein Sec61 subunit beta [Vitis
           vinifera]
          Length = 107

 Score =  117 bits (294), Expect = 2e-24
 Identities = 58/84 (69%), Positives = 64/84 (76%)
 Frame = +2

Query: 161 RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 340
           RPGPVG+ PRG+ AATAGMRRRR+G                  MLRFYTDDAPG+KITPT
Sbjct: 17  RPGPVGMAPRGTAAATAGMRRRRVGGGSGGSSSGYGGGGSGSNMLRFYTDDAPGLKITPT 76

Query: 341 VVLVMSVCFIGFVTALHVFGKLYR 412
           VVLVMS+CFIGFVTALHVFGK+YR
Sbjct: 77  VVLVMSLCFIGFVTALHVFGKIYR 100


>ref|XP_003543483.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           [Glycine max]
          Length = 105

 Score =  115 bits (287), Expect = 1e-23
 Identities = 60/87 (68%), Positives = 64/87 (73%)
 Frame = +2

Query: 161 RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 340
           RPGP G+ PRGS AATAGMRRRRLG                  MLRFYTDDAPG+KI+PT
Sbjct: 17  RPGPAGMAPRGSAAATAGMRRRRLG--GGNSSASTGVGGGSSNMLRFYTDDAPGLKISPT 74

Query: 341 VVLVMSVCFIGFVTALHVFGKLYRRSS 421
           VVLVMS+CFIGFVTALHVFGKLYR  S
Sbjct: 75  VVLVMSLCFIGFVTALHVFGKLYRSKS 101


>ref|XP_003540170.1| PREDICTED: protein transport protein Sec61 subunit beta-like
           [Glycine max]
          Length = 105

 Score =  115 bits (287), Expect = 1e-23
 Identities = 60/87 (68%), Positives = 64/87 (73%)
 Frame = +2

Query: 161 RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXXMLRFYTDDAPGVKITPT 340
           RPGP G+ PRGS AATAGMRRRRLG                  MLRFYTDDAPG+KI+PT
Sbjct: 17  RPGPAGMAPRGSAAATAGMRRRRLG--GGNSSASTGVGGGSSNMLRFYTDDAPGLKISPT 74

Query: 341 VVLVMSVCFIGFVTALHVFGKLYRRSS 421
           VVLVMS+CFIGFVTALHVFGKLYR  S
Sbjct: 75  VVLVMSLCFIGFVTALHVFGKLYRSKS 101


>ref|XP_002276029.1| PREDICTED: protein transport protein Sec61 subunit beta [Vitis
           vinifera] gi|147800942|emb|CAN75561.1| hypothetical
           protein VITISV_032577 [Vitis vinifera]
          Length = 108

 Score =  114 bits (284), Expect = 2e-23
 Identities = 60/88 (68%), Positives = 64/88 (72%), Gaps = 1/88 (1%)
 Frame = +2

Query: 161 RPGPVGVIPRGSPAATAGMRRRRLGTXXXXXXXXXXXXXXXXX-MLRFYTDDAPGVKITP 337
           RP  VG+ PRGS AATAGMRRRRLGT                  MLRFYTDDAPG+KITP
Sbjct: 17  RPSTVGMAPRGSAAATAGMRRRRLGTGSAGGGSGGFGSGSSGSNMLRFYTDDAPGLKITP 76

Query: 338 TVVLVMSVCFIGFVTALHVFGKLYRRSS 421
           TVVLVMS+CFIGFVTALHVFGK+YR  S
Sbjct: 77  TVVLVMSLCFIGFVTALHVFGKIYRHRS 104


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