BLASTX nr result

ID: Atractylodes21_contig00001580 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001580
         (1017 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chlorop...   368   1e-99
gb|ACU24072.1| unknown [Glycine max]                                  365   7e-99
ref|XP_003534543.1| PREDICTED: 50S ribosomal protein L5, chlorop...   363   4e-98
gb|ACH87176.1| 50S ribosomal protein L5 [Camellia sinensis]           363   4e-98
ref|XP_004133849.1| PREDICTED: 50S ribosomal protein L5, chlorop...   355   1e-95

>ref|XP_003552416.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Glycine
           max]
          Length = 267

 Score =  368 bits (944), Expect = 1e-99
 Identities = 178/237 (75%), Positives = 210/237 (88%), Gaps = 1/237 (0%)
 Frame = +2

Query: 95  PCGNRYGGLSVKAEAAA-GIVLVDKSEADKVNRLKTSYFEKIIPLLKEEFNYTNIHQVPK 271
           P GNR+G   V  +A+A G+VLV+KSEA+K NRLKT+Y EKIIPLL EEF+YTN HQVPK
Sbjct: 31  PHGNRHGNAVVSVKASASGVVLVEKSEAEKANRLKTAYTEKIIPLLMEEFSYTNKHQVPK 90

Query: 272 VDKIVVNCGIGDAAQNNKGLDAAINDMALITGQRPVKTKAKNPIATFKIRENQTLGIAVT 451
           ++KIVVNCGIGDAAQN KGLDAAI+D+ALITGQRP+KT+A+  +ATFKIRE Q LGIAVT
Sbjct: 91  IEKIVVNCGIGDAAQNAKGLDAAISDLALITGQRPIKTRARASLATFKIREGQPLGIAVT 150

Query: 452 LRGNVMYAFLDRLINLGLPRTRDFQGVSPNSFDGHGNYSVGLKEQSVFPELSYDALGKPR 631
           LRGN+MY+FLDR+INLGLPRTRDFQGV+PNSFDGHGNYS+G+K+Q VFPE+  D +GKPR
Sbjct: 151 LRGNMMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEIRADVVGKPR 210

Query: 632 GMDVCISTTAPTDKEAYKLLALMGMPFREGSGPATVMRRKKLKSHHFNTKTKQKSRR 802
           GMD+CI TTA TD+EA KLLALMGMPFREGSGPAT +R+KKLKSHHF+ K+K + RR
Sbjct: 211 GMDICIVTTANTDQEAQKLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGRGRR 267


>gb|ACU24072.1| unknown [Glycine max]
          Length = 267

 Score =  365 bits (938), Expect = 7e-99
 Identities = 177/237 (74%), Positives = 209/237 (88%), Gaps = 1/237 (0%)
 Frame = +2

Query: 95  PCGNRYGGLSVKAEAAA-GIVLVDKSEADKVNRLKTSYFEKIIPLLKEEFNYTNIHQVPK 271
           P GNR+G   V  +A+A G+VLV+KSEA+K NRLKT+Y EKIIPLL EEF+YTN HQVPK
Sbjct: 31  PHGNRHGNAVVSVKASASGVVLVEKSEAEKANRLKTAYTEKIIPLLMEEFSYTNKHQVPK 90

Query: 272 VDKIVVNCGIGDAAQNNKGLDAAINDMALITGQRPVKTKAKNPIATFKIRENQTLGIAVT 451
           ++KIVVNCGIGDAAQN KGLDAAI+D+ALITGQRP+KT+A+  +AT KIRE Q LGIAVT
Sbjct: 91  IEKIVVNCGIGDAAQNAKGLDAAISDLALITGQRPIKTRARASLATLKIREGQPLGIAVT 150

Query: 452 LRGNVMYAFLDRLINLGLPRTRDFQGVSPNSFDGHGNYSVGLKEQSVFPELSYDALGKPR 631
           LRGN+MY+FLDR+INLGLPRTRDFQGV+PNSFDGHGNYS+G+K+Q VFPE+  D +GKPR
Sbjct: 151 LRGNMMYSFLDRVINLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEIRADVVGKPR 210

Query: 632 GMDVCISTTAPTDKEAYKLLALMGMPFREGSGPATVMRRKKLKSHHFNTKTKQKSRR 802
           GMD+CI TTA TD+EA KLLALMGMPFREGSGPAT +R+KKLKSHHF+ K+K + RR
Sbjct: 211 GMDICIVTTANTDQEAQKLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGRGRR 267


>ref|XP_003534543.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Glycine
           max]
          Length = 267

 Score =  363 bits (932), Expect = 4e-98
 Identities = 172/237 (72%), Positives = 211/237 (89%), Gaps = 1/237 (0%)
 Frame = +2

Query: 95  PCGNRYGGLSVKAEAA-AGIVLVDKSEADKVNRLKTSYFEKIIPLLKEEFNYTNIHQVPK 271
           P  N++G   V  +A+ +G+VLV+KSEA+K NRLKT+Y EKIIPLL EEF+YTN HQVPK
Sbjct: 31  PHSNKHGNALVSVKASVSGVVLVEKSEAEKANRLKTAYTEKIIPLLMEEFSYTNKHQVPK 90

Query: 272 VDKIVVNCGIGDAAQNNKGLDAAINDMALITGQRPVKTKAKNPIATFKIRENQTLGIAVT 451
           ++KIVVNCGIGDAAQN KGLDAAI+D+ALITGQRP+KT+A+  +ATFKIRE Q LGI+VT
Sbjct: 91  IEKIVVNCGIGDAAQNAKGLDAAISDLALITGQRPIKTRARASLATFKIREGQPLGISVT 150

Query: 452 LRGNVMYAFLDRLINLGLPRTRDFQGVSPNSFDGHGNYSVGLKEQSVFPELSYDALGKPR 631
           LRGN+MY+FLDR++NLGLPRTRDFQGV+PNSFDGHGNYS+G+K+Q VFPE+  D +GKPR
Sbjct: 151 LRGNMMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEIRADVVGKPR 210

Query: 632 GMDVCISTTAPTDKEAYKLLALMGMPFREGSGPATVMRRKKLKSHHFNTKTKQKSRR 802
           GMD+CI+TTA TD+EA+KLLALMGMPFREGSGPAT +R+KKLKSHHF+ K+K + R+
Sbjct: 211 GMDICIATTAKTDQEAHKLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGRGRK 267


>gb|ACH87176.1| 50S ribosomal protein L5 [Camellia sinensis]
          Length = 221

 Score =  363 bits (932), Expect = 4e-98
 Identities = 170/220 (77%), Positives = 204/220 (92%)
 Frame = +2

Query: 143 AGIVLVDKSEADKVNRLKTSYFEKIIPLLKEEFNYTNIHQVPKVDKIVVNCGIGDAAQNN 322
           +GI+LV+++E++K+NRLKT+Y +KI+PLLKEEF+YTNIHQVPKV+KIVVNCGIGDAAQN 
Sbjct: 2   SGIILVEETESEKLNRLKTTYLQKIVPLLKEEFSYTNIHQVPKVEKIVVNCGIGDAAQNA 61

Query: 323 KGLDAAINDMALITGQRPVKTKAKNPIATFKIRENQTLGIAVTLRGNVMYAFLDRLINLG 502
           KGLDAA+ D+A ITGQRPVKT+AK  IATFK+RE Q +G+AVTLRGNVMY+FLDRLINLG
Sbjct: 62  KGLDAAMGDLANITGQRPVKTRAKKAIATFKLREGQPIGLAVTLRGNVMYSFLDRLINLG 121

Query: 503 LPRTRDFQGVSPNSFDGHGNYSVGLKEQSVFPELSYDALGKPRGMDVCISTTAPTDKEAY 682
           LPRTRDFQGV+ NSFDGHGN+S+G KEQ VFPE+ YDALGKPRGMDVCI+TTA TDKE Y
Sbjct: 122 LPRTRDFQGVNSNSFDGHGNFSIGFKEQGVFPEIRYDALGKPRGMDVCITTTAKTDKEGY 181

Query: 683 KLLALMGMPFREGSGPATVMRRKKLKSHHFNTKTKQKSRR 802
           +LLALMGMPFREG GP+TV+R+KKLKSHHF++K+K ++RR
Sbjct: 182 RLLALMGMPFREGGGPSTVVRKKKLKSHHFDSKSKTRARR 221


>ref|XP_004133849.1| PREDICTED: 50S ribosomal protein L5, chloroplastic-like [Cucumis
           sativus] gi|449480235|ref|XP_004155837.1| PREDICTED: 50S
           ribosomal protein L5, chloroplastic-like [Cucumis
           sativus]
          Length = 271

 Score =  355 bits (911), Expect = 1e-95
 Identities = 180/256 (70%), Positives = 215/256 (83%), Gaps = 8/256 (3%)
 Frame = +2

Query: 59  HFPAVSPVRLSPP--CGNRYG----GLSVKAEAAAG--IVLVDKSEADKVNRLKTSYFEK 214
           H P  S VR + P  CGN       G+ VKA A+ G  IVLV+K+EA+KVNRLK++Y EK
Sbjct: 17  HSPFFS-VRFAAPVGCGNPSNVAQLGMRVKALASTGGAIVLVEKAEAEKVNRLKSNYLEK 75

Query: 215 IIPLLKEEFNYTNIHQVPKVDKIVVNCGIGDAAQNNKGLDAAINDMALITGQRPVKTKAK 394
           I+PLL +EF+Y NIHQVPK++KIVVNCGIGDA QN KGL+AAIN++A ITGQRPVKT+AK
Sbjct: 76  IVPLLMDEFSYDNIHQVPKIEKIVVNCGIGDAQQNAKGLEAAINELASITGQRPVKTRAK 135

Query: 395 NPIATFKIRENQTLGIAVTLRGNVMYAFLDRLINLGLPRTRDFQGVSPNSFDGHGNYSVG 574
             IATFKIRE Q LGIA TLRGNVMY+FLDRLINLGLPRTRDFQG++ +SFDGHGNYS+G
Sbjct: 136 KSIATFKIREGQPLGIAATLRGNVMYSFLDRLINLGLPRTRDFQGLNSSSFDGHGNYSIG 195

Query: 575 LKEQSVFPELSYDALGKPRGMDVCISTTAPTDKEAYKLLALMGMPFREGSGPATVMRRKK 754
           ++EQSVFPE+ +D LGKPRGMDVCI+TTA TD+EA +LLALMGMPFRE  G A VMR+KK
Sbjct: 196 IREQSVFPEIKFDTLGKPRGMDVCITTTAETDQEAQRLLALMGMPFRESGGAAAVMRKKK 255

Query: 755 LKSHHFNTKTKQKSRR 802
           LKSHHF++K+K ++RR
Sbjct: 256 LKSHHFDSKSKGRARR 271


Top