BLASTX nr result

ID: Atractylodes21_contig00001568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001568
         (226 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus c...    62   6e-08
ref|XP_002514155.1| hypothetical protein RCOM_1048070 [Ricinus c...    60   1e-07
ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF11...    60   2e-07
emb|CBI28007.3| unnamed protein product [Vitis vinifera]               60   2e-07
ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1...    58   7e-07

>ref|XP_002514228.1| hypothetical protein RCOM_1049910 [Ricinus communis]
           gi|223546684|gb|EEF48182.1| hypothetical protein
           RCOM_1049910 [Ricinus communis]
          Length = 109

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 5/54 (9%)
 Frame = -1

Query: 154 EAENHVFTMPTVV--DASGICTVCMEGFKSSG---KQAPCGHVYHFHCITKWLS 8
           E+++ V  MPTV   D   +C++CMEGF+S G   KQ PCGHVYH  CI+ WLS
Sbjct: 39  ESDSLVADMPTVTSTDDHDVCSICMEGFQSPGVCGKQVPCGHVYHAPCISSWLS 92


>ref|XP_002514155.1| hypothetical protein RCOM_1048070 [Ricinus communis]
           gi|223546611|gb|EEF48109.1| hypothetical protein
           RCOM_1048070 [Ricinus communis]
          Length = 124

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
 Frame = -1

Query: 223 HHYTTTISATSANTKTTEPRSPEEAENHVFTMPTVVDASGICTVCMEGFKSS---GKQAP 53
           HH TT  +    N+      +     NH+ T     +   +C  CMEGF+SS   GKQ P
Sbjct: 38  HHQTTPAN----NSPQVVVPADHRHHNHMPTTIPATEDDEVCIFCMEGFESSRIGGKQTP 93

Query: 52  CGHVYHFHCITKWLS 8
           CGHVYH  CI+ WLS
Sbjct: 94  CGHVYHAACISSWLS 108


>ref|XP_003633119.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Vitis vinifera]
          Length = 102

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
 Frame = -1

Query: 211 TTISATSANTKTTEPRSPEEAENHVFTMPTVVDASGICTVCMEGFKSS--GKQAPCGHVY 38
           T +  TS  +K+T         + V TMPTV  A   CTVC EGF+S   GKQ PCGH Y
Sbjct: 27  TAVDDTSEISKST---------SMVSTMPTVT-AVDACTVCREGFQSGEGGKQLPCGHFY 76

Query: 37  HFHCITKWLSL 5
           H  CI  WLSL
Sbjct: 77  HAGCIASWLSL 87


>emb|CBI28007.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 35/71 (49%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
 Frame = -1

Query: 211 TTISATSANTKTTEPRSPEEAENHVFTMPTVVDASGICTVCMEGFKSS--GKQAPCGHVY 38
           T +  TS  +K+T         + V TMPTV  A   CTVC EGF+S   GKQ PCGH Y
Sbjct: 93  TAVDDTSEISKST---------SMVSTMPTVT-AVDACTVCREGFQSGEGGKQLPCGHFY 142

Query: 37  HFHCITKWLSL 5
           H  CI  WLSL
Sbjct: 143 HAGCIASWLSL 153


>ref|XP_004157948.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 116

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 2/47 (4%)
 Frame = -1

Query: 139 VFTMPTVVDASGICTVCMEGF--KSSGKQAPCGHVYHFHCITKWLSL 5
           V  +PTV  A  +C VCME F     GKQ PCGHVYH  C++ WLS+
Sbjct: 45  VAELPTVAAADDVCAVCMEDFLPDEGGKQIPCGHVYHQSCLSSWLSI 91


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