BLASTX nr result

ID: Atractylodes21_contig00001542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001542
         (1304 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Viti...   231   2e-58
emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]   231   2e-58
ref|XP_002511792.1| ring finger protein, putative [Ricinus commu...   231   3e-58
ref|XP_002301320.1| predicted protein [Populus trichocarpa] gi|2...   213   9e-53
ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like...   202   1e-49

>ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Vitis vinifera]
           gi|296089077|emb|CBI38780.3| unnamed protein product
           [Vitis vinifera]
          Length = 201

 Score =  231 bits (590), Expect = 2e-58
 Identities = 116/164 (70%), Positives = 131/164 (79%), Gaps = 16/164 (9%)
 Frame = -2

Query: 724 MNLITTVIGFAMSATFIVFVCARLVCGRFRRYESSQLFEIDSRIDLEMQEHQVTGLEPVM 545
           MNLITTVIGF MSATFIVFVC RL+CGR R  ES Q+FEIDSRIDLE  EH+++GLEPVM
Sbjct: 5   MNLITTVIGFGMSATFIVFVCTRLICGRLRGVESRQMFEIDSRIDLEQPEHRISGLEPVM 64

Query: 544 VAAIPTMKFERQAFGSMEDAQCTICLGEYQEKEVLRIMPKCGHSFHLSCIDLWLRKQATC 365
           VAAIPTMKF R+AF S+EDAQC+ICLGEYQEKEVLRIMPKCGH+FHLSCID+WLRKQ+TC
Sbjct: 65  VAAIPTMKFNREAFSSVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQSTC 124

Query: 364 PVCRLSI----------------IAAVNSPGISREISIRQWLLP 281
           PVCRLS+                  +V+SP IS + S  QWLLP
Sbjct: 125 PVCRLSLQDSFETKHVRPEAFDTAQSVDSPEISVDRS-HQWLLP 167


>emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]
          Length = 224

 Score =  231 bits (590), Expect = 2e-58
 Identities = 116/164 (70%), Positives = 131/164 (79%), Gaps = 16/164 (9%)
 Frame = -2

Query: 724 MNLITTVIGFAMSATFIVFVCARLVCGRFRRYESSQLFEIDSRIDLEMQEHQVTGLEPVM 545
           MNLITTVIGF MSATFIVFVC RL+CGR R  ES Q+FEIDSRIDLE  EH+++GLEPVM
Sbjct: 28  MNLITTVIGFGMSATFIVFVCTRLICGRLRGVESRQMFEIDSRIDLEQPEHRISGLEPVM 87

Query: 544 VAAIPTMKFERQAFGSMEDAQCTICLGEYQEKEVLRIMPKCGHSFHLSCIDLWLRKQATC 365
           VAAIPTMKF R+AF S+EDAQC+ICLGEYQEKEVLRIMPKCGH+FHLSCID+WLRKQ+TC
Sbjct: 88  VAAIPTMKFNREAFSSVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLRKQSTC 147

Query: 364 PVCRLSI----------------IAAVNSPGISREISIRQWLLP 281
           PVCRLS+                  +V+SP IS + S  QWLLP
Sbjct: 148 PVCRLSLQDSFETKHVRPEAFDTAQSVDSPEISVDRS-HQWLLP 190


>ref|XP_002511792.1| ring finger protein, putative [Ricinus communis]
           gi|223548972|gb|EEF50461.1| ring finger protein,
           putative [Ricinus communis]
          Length = 201

 Score =  231 bits (589), Expect = 3e-58
 Identities = 113/169 (66%), Positives = 133/169 (78%), Gaps = 16/169 (9%)
 Frame = -2

Query: 739 MFGKTMNLITTVIGFAMSATFIVFVCARLVCGRFRRYESSQLFEIDSRIDLEMQEHQVTG 560
           M G  MNLITTVIGF MSATFIVFVC R++CGR R  ES Q FE++SRIDL+  EHQ++G
Sbjct: 1   MLGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRASESRQTFELESRIDLDQPEHQISG 60

Query: 559 LEPVMVAAIPTMKFERQAFGSMEDAQCTICLGEYQEKEVLRIMPKCGHSFHLSCIDLWLR 380
           LEPVMVAAIPTMKF R+AF ++EDAQC+ICLGEYQEKEVLRIMPKCGH+FHLSCID+WLR
Sbjct: 61  LEPVMVAAIPTMKFNREAFTAVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDVWLR 120

Query: 379 KQATCPVCR----------------LSIIAAVNSPGISREISIRQWLLP 281
           KQ+TCPVCR                +S++ +++SP  S E S RQWLLP
Sbjct: 121 KQSTCPVCRFPIQDTLEAKHMRQATMSMVRSIDSPETSTEHS-RQWLLP 168


>ref|XP_002301320.1| predicted protein [Populus trichocarpa] gi|222843046|gb|EEE80593.1|
           predicted protein [Populus trichocarpa]
          Length = 197

 Score =  213 bits (542), Expect = 9e-53
 Identities = 104/164 (63%), Positives = 125/164 (76%), Gaps = 16/164 (9%)
 Frame = -2

Query: 724 MNLITTVIGFAMSATFIVFVCARLVCGRFRRYESSQLFEIDSRIDLEMQEHQVTGLEPVM 545
           MNLITT IGF MSATFIVFVCAR++CGR R  ES Q+FEI+SRID E  EH++ GLEPV+
Sbjct: 1   MNLITTAIGFGMSATFIVFVCARIICGRIRGTESRQMFEIESRIDPEQPEHRIGGLEPVL 60

Query: 544 VAAIPTMKFERQAFGSMEDAQCTICLGEYQEKEVLRIMPKCGHSFHLSCIDLWLRKQATC 365
           +AAIPT++F  + F S EDAQC+ICLGEYQEKEVLRIMP CGH+FHLSCID+WLRKQ+TC
Sbjct: 61  LAAIPTLRFTHEEFSSAEDAQCSICLGEYQEKEVLRIMPGCGHNFHLSCIDVWLRKQSTC 120

Query: 364 PVCR----------------LSIIAAVNSPGISREISIRQWLLP 281
           PVCR                +S++ +++SP    E S RQWLLP
Sbjct: 121 PVCRFPIQDSFEAKHMRQTAISMVQSIDSPDTRSEQS-RQWLLP 163


>ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
           gi|449472490|ref|XP_004153610.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
           gi|449516541|ref|XP_004165305.1| PREDICTED: RING-H2
           finger protein ATL54-like [Cucumis sativus]
          Length = 203

 Score =  202 bits (515), Expect = 1e-49
 Identities = 96/134 (71%), Positives = 116/134 (86%), Gaps = 2/134 (1%)
 Frame = -2

Query: 739 MFGKTMNLITTVIGFAMSATFIVFVCARLVCGRFRRYESSQL-FEIDSRIDLEMQ-EHQV 566
           M G  MNLITTVIGF MSATFIVFVC R++CGR R  +S+   +EI+SR+DLE Q E + 
Sbjct: 1   MTGSGMNLITTVIGFGMSATFIVFVCTRIICGRLRSAQSNTPNYEIESRLDLEQQPESRA 60

Query: 565 TGLEPVMVAAIPTMKFERQAFGSMEDAQCTICLGEYQEKEVLRIMPKCGHSFHLSCIDLW 386
           +GLEPV++AAIPTM F+R+AF S+EDAQC+ICLGEY+EKEVLRIMPKCGHSFHL+CID+W
Sbjct: 61  SGLEPVLIAAIPTMTFDREAFSSIEDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVW 120

Query: 385 LRKQATCPVCRLSI 344
           LRKQ+TCPVCRL +
Sbjct: 121 LRKQSTCPVCRLPL 134


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