BLASTX nr result

ID: Atractylodes21_contig00001521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00001521
         (1004 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   227   4e-57
ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|2...   213   8e-53
ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|2...   204   3e-50
ref|XP_002526304.1| conserved hypothetical protein [Ricinus comm...   190   4e-46
ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A...   188   2e-45

>ref|XP_002283507.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Vitis vinifera]
          Length = 162

 Score =  227 bits (578), Expect = 4e-57
 Identities = 113/168 (67%), Positives = 138/168 (82%), Gaps = 1/168 (0%)
 Frame = +2

Query: 77  MGFQNQLTDVSSDSIPVFVLAIIANGVCYLRSLVFTFLHSLGISRYRSDEVDDAMLFDAV 256
           MG Q+QL DVSSDSIP+ ++AIIAN V Y+RSL+     S+G+SR+ +DEV+D +L  AV
Sbjct: 1   MGLQSQLNDVSSDSIPLLLVAIIANCVAYIRSLLLGLFQSMGLSRFDADEVEDGLL-GAV 59

Query: 257 GSGLAGLILLADQLNLNRVFSYKYSLRAEGPDP-AASECVVCLNHLSDGEQVRKLACQHV 433
           GSGLA LI+LA+QLNLNRVFSY+Y     G D  AAS+CVVCL  L DG+QVR+LAC+HV
Sbjct: 60  GSGLASLIVLAEQLNLNRVFSYRY-----GEDGGAASDCVVCLCRLRDGDQVRRLACRHV 114

Query: 434 FHKDCFDGWLDHLNFNCPLCRSPLVSDERVAMTRRRMTDDVMDWFSFR 577
           FHK+CFDGWLDHLNFNCPLCRSPLVSDERVA+T+RR+  D++ WFS R
Sbjct: 115 FHKECFDGWLDHLNFNCPLCRSPLVSDERVALTQRRVGGDLVTWFSLR 162


>ref|XP_002312419.1| predicted protein [Populus trichocarpa] gi|222852239|gb|EEE89786.1|
           predicted protein [Populus trichocarpa]
          Length = 168

 Score =  213 bits (541), Expect = 8e-53
 Identities = 104/168 (61%), Positives = 127/168 (75%), Gaps = 1/168 (0%)
 Frame = +2

Query: 77  MGFQNQLTDVSSDSIPVFVLAIIANGVCYLRSLVFTFLHSLGISRYRSDEVDDAMLFDAV 256
           MG QNQL DVSS+SIP+ ++A IAN V  LRS  F+  HS+G+ R     V D  L  ++
Sbjct: 1   MGLQNQLNDVSSESIPLLLIAFIANCVACLRSFFFSVFHSVGVHRLDQAHVMDDRLMGSM 60

Query: 257 GSGLAGLILLADQLNLNRVFSYKYSL-RAEGPDPAASECVVCLNHLSDGEQVRKLACQHV 433
           GSGLAGLI+LA+Q  LNRVF+YKY   R +G D   S+CVVCL  L DG+QVRKL C+HV
Sbjct: 61  GSGLAGLIVLAEQRKLNRVFAYKYCCGRDDGNDKGGSDCVVCLCTLRDGDQVRKLDCRHV 120

Query: 434 FHKDCFDGWLDHLNFNCPLCRSPLVSDERVAMTRRRMTDDVMDWFSFR 577
           FHK+CFDGWLDHLNFNCPLCR PLVSDERV  TRRR+ +++++WFS R
Sbjct: 121 FHKECFDGWLDHLNFNCPLCRWPLVSDERVEETRRRVGENLVEWFSLR 168


>ref|XP_002314830.1| predicted protein [Populus trichocarpa] gi|222863870|gb|EEF01001.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  204 bits (519), Expect = 3e-50
 Identities = 102/169 (60%), Positives = 122/169 (72%), Gaps = 2/169 (1%)
 Frame = +2

Query: 77  MGFQNQLTDVSSDSIPVFVLAIIANGVCYLRSLVFTFLHSLGISRYRSDEVDDAMLFDAV 256
           MG QNQL DVSS+SIP+ ++A+IAN V  LRS +F+  HS+G+ R     V D  L  ++
Sbjct: 1   MGLQNQLNDVSSESIPLLLIALIANCVACLRSFLFSVFHSVGLHRLDQAHVMDDGLLGSI 60

Query: 257 GSGLAGLILLADQLNLNRVFSYKYSLRAEGP--DPAASECVVCLNHLSDGEQVRKLACQH 430
           GSG AGLI+LA+Q  LNRVFSYKY    +    D   S+CVVCL  L  G+QVR+L C H
Sbjct: 61  GSGFAGLIVLAEQRKLNRVFSYKYCCGGDSNTNDKGGSDCVVCLCTLRHGDQVRRLDCCH 120

Query: 431 VFHKDCFDGWLDHLNFNCPLCRSPLVSDERVAMTRRRMTDDVMDWFSFR 577
           VFHK+CFDGWLDHLNFNCPLCR PLVSDERV  TRRR+  DV+DW S R
Sbjct: 121 VFHKECFDGWLDHLNFNCPLCRWPLVSDERVEETRRRVGADVVDWLSLR 169


>ref|XP_002526304.1| conserved hypothetical protein [Ricinus communis]
           gi|223534385|gb|EEF36093.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 183

 Score =  190 bits (483), Expect = 4e-46
 Identities = 95/183 (51%), Positives = 124/183 (67%), Gaps = 16/183 (8%)
 Frame = +2

Query: 77  MGFQNQLTDVSSDSIPVFVLAIIANGVCYLRSLVFTFLHSLGISRYRSDE---VDDAMLF 247
           MG Q+QL DVSSDSIP+ +LA+IA  + +LRS  F+  HS+ + R+ + +    D+ +L 
Sbjct: 1   MGLQSQLNDVSSDSIPLLLLALIAKSIDHLRSFFFSIFHSMALPRFTNSQSILFDEGLLI 60

Query: 248 DAVGSGLAGLILLADQLNLNRVFSYKYSLRAEGPDP-------------AASECVVCLNH 388
           D++GSGL+ LI+LA+QLN+NR+FSY+Y       D                S+CVVCL  
Sbjct: 61  DSMGSGLSSLIVLAEQLNVNRLFSYRYRSCGGNDDNHNRGGAGAGAGGGGGSDCVVCLCA 120

Query: 389 LSDGEQVRKLACQHVFHKDCFDGWLDHLNFNCPLCRSPLVSDERVAMTRRRMTDDVMDWF 568
           LSDG+QVRKL C+HVFHKDCFD WL  L FNCPLCRSPLVS +RV  TR R+  D++ WF
Sbjct: 121 LSDGDQVRKLDCRHVFHKDCFDDWLRQLKFNCPLCRSPLVSGQRVLSTRSRVAGDLVAWF 180

Query: 569 SFR 577
           S R
Sbjct: 181 SVR 183


>ref|XP_003536661.1| PREDICTED: E3 ubiquitin-protein ligase RHA2A-like [Glycine max]
          Length = 169

 Score =  188 bits (478), Expect = 2e-45
 Identities = 95/167 (56%), Positives = 115/167 (68%), Gaps = 2/167 (1%)
 Frame = +2

Query: 77  MGFQNQLTDVSSDSIPVFVLAIIANGVCYLRSLVFTFLHSLGISRYRSDEVDDAMLFDAV 256
           MG QNQL DVSS SIP+ VLA IA  V YLRS++F  L +LG+SR+ SD++ D     AV
Sbjct: 1   MGLQNQLNDVSSGSIPLLVLAQIATCVNYLRSMLFALLQTLGLSRFHSDQIVDERFLAAV 60

Query: 257 GSGLAGLILLADQLNLNRVFSYKYSLRAEGPDPAASE--CVVCLNHLSDGEQVRKLACQH 430
           GSGLAGLI+L+DQL L+  F + +   A G D       CVVC     DG+QVR L C+H
Sbjct: 61  GSGLAGLIMLSDQLTLSSQFFHHHHGTAAGHDHDHDHHPCVVCQATFEDGDQVRMLPCRH 120

Query: 431 VFHKDCFDGWLDHLNFNCPLCRSPLVSDERVAMTRRRMTDDVMDWFS 571
           VFH+ CFDGWL H  FNCPLCRSPL SDERVA+T RR+   ++ WFS
Sbjct: 121 VFHRRCFDGWLHHYKFNCPLCRSPLFSDERVALTERRLGQQLISWFS 167


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