BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000384
         (862 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   248   1e-63
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              248   1e-63
ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|2...   234   1e-59
ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis ...   234   2e-59
ref|NP_565856.1| RNApolymerase sigma-subunit F [Arabidopsis thal...   232   7e-59

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  248 bits (633), Expect = 1e-63
 Identities = 119/213 (55%), Positives = 162/213 (76%)
 Frame = +3

Query: 3   QDLLQEGSMGLMRSVLKFKPGAGSRFSTYAVWWIRDSIRRAIYRHSKLIRLPEGVYGLLY 182
           QDLLQEGSMGLM SV KFKP AG RF++YA WWIR ++R+AI++HS+ IRLPE +Y LL 
Sbjct: 359 QDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLG 418

Query: 183 KVSEAKRICIREGHHEPTQKQIAAQAGMPVEKVQKLRSIQKITLSLQQPVWPDDSTTYEE 362
           KV EAKR+ I+EGHH+PT+++IA + G+ +EK+Q+L    ++ LS+QQPVW D  TT++E
Sbjct: 419 KVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQE 478

Query: 363 ITADTTIDSPDTNISKQLIRNHISNLLDVLDPNERKVIRLRYGIGVEVHKPLSLVNVGLI 542
           +TADT I+ PD +++KQL+R H+ NLL VL P ER++IRLR+GIG  +  P +L  +GL+
Sbjct: 479 VTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGI--PRTLSEIGLV 536

Query: 543 MGLSGERIRQIECGSLFKLKQYSESQELAAYKD 641
            G S ER+RQ+E  +L KLKQ   S  L +Y D
Sbjct: 537 FGFSKERVRQLEQRALHKLKQCLSSHGLESYTD 569


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  248 bits (633), Expect = 1e-63
 Identities = 119/213 (55%), Positives = 162/213 (76%)
 Frame = +3

Query: 3   QDLLQEGSMGLMRSVLKFKPGAGSRFSTYAVWWIRDSIRRAIYRHSKLIRLPEGVYGLLY 182
           QDLLQEGSMGLM SV KFKP AG RF++YA WWIR ++R+AI++HS+ IRLPE +Y LL 
Sbjct: 348 QDLLQEGSMGLMNSVEKFKPNAGCRFASYAYWWIRQAVRKAIFQHSRTIRLPENMYSLLG 407

Query: 183 KVSEAKRICIREGHHEPTQKQIAAQAGMPVEKVQKLRSIQKITLSLQQPVWPDDSTTYEE 362
           KV EAKR+ I+EGHH+PT+++IA + G+ +EK+Q+L    ++ LS+QQPVW D  TT++E
Sbjct: 408 KVKEAKRLFIQEGHHDPTKEEIAERVGITIEKLQRLLLHTRMPLSMQQPVWADQDTTFQE 467

Query: 363 ITADTTIDSPDTNISKQLIRNHISNLLDVLDPNERKVIRLRYGIGVEVHKPLSLVNVGLI 542
           +TADT I+ PD +++KQL+R H+ NLL VL P ER++IRLR+GIG  +  P +L  +GL+
Sbjct: 468 VTADTGIEIPDVSVAKQLMRQHVRNLLHVLTPKERRIIRLRFGIGDGI--PRTLSEIGLV 525

Query: 543 MGLSGERIRQIECGSLFKLKQYSESQELAAYKD 641
            G S ER+RQ+E  +L KLKQ   S  L +Y D
Sbjct: 526 FGFSKERVRQLEQRALHKLKQCLSSHGLESYTD 558


>ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|222833385|gb|EEE71862.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  234 bits (598), Expect = 1e-59
 Identities = 117/213 (54%), Positives = 159/213 (74%)
 Frame = +3

Query: 3   QDLLQEGSMGLMRSVLKFKPGAGSRFSTYAVWWIRDSIRRAIYRHSKLIRLPEGVYGLLY 182
           QDLLQEG++GLM+S+ KFKP AG RF+TYA WWIR +I +AI++HS+ IRLPE VYGLL 
Sbjct: 322 QDLLQEGTVGLMKSIEKFKPQAGCRFATYAYWWIRQTITKAIFQHSRTIRLPENVYGLLG 381

Query: 183 KVSEAKRICIREGHHEPTQKQIAAQAGMPVEKVQKLRSIQKITLSLQQPVWPDDSTTYEE 362
           KV EAKR  I+EG+H+PT ++IA + G+ ++K++KL    +  LS+QQ VW D +TT++E
Sbjct: 382 KVMEAKRSYIQEGNHQPTAEEIARRVGIAIDKLEKLLCFTRTPLSMQQTVWSDQNTTFQE 441

Query: 363 ITADTTIDSPDTNISKQLIRNHISNLLDVLDPNERKVIRLRYGIGVEVHKPLSLVNVGLI 542
           ITADT I+ PD +++KQL+R HI  LL++L   ER++IRLR+GI  E  K  SL  +G +
Sbjct: 442 ITADTEIEIPDMSVAKQLMRKHIRGLLNILSLKERRIIRLRFGI--EDGKQKSLSEIGNV 499

Query: 543 MGLSGERIRQIECGSLFKLKQYSESQELAAYKD 641
            GLS ER+RQ+E  +L+KLKQ   S  L AY D
Sbjct: 500 FGLSKERVRQLESRALYKLKQCVGSHGLDAYAD 532


>ref|XP_002881484.1| RNA polymerase sigma-70 factor [Arabidopsis lyrata subsp. lyrata]
           gi|297327323|gb|EFH57743.1| RNA polymerase sigma-70
           factor [Arabidopsis lyrata subsp. lyrata]
          Length = 546

 Score =  234 bits (597), Expect = 2e-59
 Identities = 113/213 (53%), Positives = 160/213 (75%)
 Frame = +3

Query: 3   QDLLQEGSMGLMRSVLKFKPGAGSRFSTYAVWWIRDSIRRAIYRHSKLIRLPEGVYGLLY 182
           QDLLQEGSMGLM+SV KFKP +G RF+TYA WWIR SIR++I+++S+ IRLPE VY LL 
Sbjct: 333 QDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLG 392

Query: 183 KVSEAKRICIREGHHEPTQKQIAAQAGMPVEKVQKLRSIQKITLSLQQPVWPDDSTTYEE 362
           KVSEA++ C++EG++ P+++Q+A   G+  EK+ KL    +  LS+QQP+W D  TT++E
Sbjct: 393 KVSEARKTCVQEGNYRPSKEQLAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQE 452

Query: 363 ITADTTIDSPDTNISKQLIRNHISNLLDVLDPNERKVIRLRYGIGVEVHKPLSLVNVGLI 542
           IT D+ I++P  ++ KQ++RNH+ NLL+VL P ER++I+LR+GI  +  K  SL  +G I
Sbjct: 453 ITPDSGIETPTMSVGKQMMRNHVRNLLNVLSPKERRIIKLRFGI--DGGKQRSLSEIGEI 510

Query: 543 MGLSGERIRQIECGSLFKLKQYSESQELAAYKD 641
            GLS ER+RQ+E  +L++LKQ+  S  L AY D
Sbjct: 511 YGLSKERVRQLESRALYRLKQHMNSHGLHAYAD 543


>ref|NP_565856.1| RNApolymerase sigma-subunit F [Arabidopsis thaliana]
           gi|75173811|sp|Q9LD95.1|SIGF_ARATH RecName: Full=RNA
           polymerase sigma factor sigF, chloroplastic; Short=Sigma
           factor F; Short=Sigma-F; AltName: Full=Protein SINGLET
           OXYGEN-LINKED DEATH ACTIVATOR 8; AltName: Full=RNA
           polymerase sigma factor sig6; Short=Atsig6; Short=Sigma
           factor 6; Flags: Precursor gi|7209640|dbj|BAA92288.1|
           SigF [Arabidopsis thaliana] gi|7688083|emb|CAB89775.1|
           sigma factor-like protein [Arabidopsis thaliana]
           gi|16604647|gb|AAL24116.1| putative RNA polymerase
           sigma-70 factor [Arabidopsis thaliana]
           gi|20197948|gb|AAD31584.2| putative RNA polymerase
           sigma-70 factor [Arabidopsis thaliana]
           gi|20259557|gb|AAM14121.1| putative RNA polymerase
           sigma-70 factor protein [Arabidopsis thaliana]
           gi|330254238|gb|AEC09332.1| RNApolymerase sigma-subunit
           F [Arabidopsis thaliana]
          Length = 547

 Score =  232 bits (592), Expect = 7e-59
 Identities = 113/213 (53%), Positives = 159/213 (74%)
 Frame = +3

Query: 3   QDLLQEGSMGLMRSVLKFKPGAGSRFSTYAVWWIRDSIRRAIYRHSKLIRLPEGVYGLLY 182
           QDLLQEGSMGLM+SV KFKP +G RF+TYA WWIR SIR++I+++S+ IRLPE VY LL 
Sbjct: 334 QDLLQEGSMGLMKSVEKFKPQSGCRFATYAYWWIRQSIRKSIFQNSRTIRLPENVYMLLG 393

Query: 183 KVSEAKRICIREGHHEPTQKQIAAQAGMPVEKVQKLRSIQKITLSLQQPVWPDDSTTYEE 362
           KVSEA++ C++EG++ P+++++A   G+  EK+ KL    +  LS+QQP+W D  TT++E
Sbjct: 394 KVSEARKTCVQEGNYRPSKEELAGHVGVSTEKLDKLLYNTRTPLSMQQPIWSDQDTTFQE 453

Query: 363 ITADTTIDSPDTNISKQLIRNHISNLLDVLDPNERKVIRLRYGIGVEVHKPLSLVNVGLI 542
           IT D+ I++P  ++ KQL+RNH+ NLL+VL P ER++I+LR+GI  +  K  SL  +G I
Sbjct: 454 ITPDSGIETPTMSVGKQLMRNHVRNLLNVLSPKERRIIKLRFGI--DGGKQRSLSEIGEI 511

Query: 543 MGLSGERIRQIECGSLFKLKQYSESQELAAYKD 641
            GLS ER+RQ+E  +L++LKQ   S  L AY D
Sbjct: 512 YGLSKERVRQLESRALYRLKQNMNSHGLHAYAD 544