BLASTX nr result

ID: Atractylodes21_contig00000245 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000245
         (722 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17503.3| unnamed protein product [Vitis vinifera]               78   2e-12
ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like ...    78   2e-12
tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily...    74   4e-11
tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily...    74   4e-11
ref|NP_001169219.1| putative HLH DNA-binding domain superfamily ...    74   4e-11

>emb|CBI17503.3| unnamed protein product [Vitis vinifera]
          Length = 366

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
 Frame = -2

Query: 343 SDFPSPDDFQCCELEGEGDLWSSSVDELSAMIEQNQRLKKRKLEFDVVEVDSR-KRRRGD 167
           S  P PD      ++G      +SV +  A +   +  K +K++ D  E +S+ + +  +
Sbjct: 112 SSCPLPDLGAATSVDGRELAGRNSVKKRKAEVALTEECKDQKIKRDEEEEESKIEEKHSE 171

Query: 166 LKTKTL----DPKPDYIHVRARRGQATDSHSLXXXXXXXXXXXKMQFLQDLVPGCNQIT 2
           +          PKPDYIHVRARRGQATDSHSL           KM++LQDLVPGCN+IT
Sbjct: 172 ISPNASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKIT 230


>ref|XP_002266502.1| PREDICTED: transcription factor bHLH64-like [Vitis vinifera]
          Length = 362

 Score = 78.2 bits (191), Expect = 2e-12
 Identities = 47/119 (39%), Positives = 65/119 (54%), Gaps = 5/119 (4%)
 Frame = -2

Query: 343 SDFPSPDDFQCCELEGEGDLWSSSVDELSAMIEQNQRLKKRKLEFDVVEVDSR-KRRRGD 167
           S  P PD      ++G      +SV +  A +   +  K +K++ D  E +S+ + +  +
Sbjct: 112 SSCPLPDLGAATSVDGRELAGRNSVKKRKAEVALTEECKDQKIKRDEEEEESKIEEKHSE 171

Query: 166 LKTKTL----DPKPDYIHVRARRGQATDSHSLXXXXXXXXXXXKMQFLQDLVPGCNQIT 2
           +          PKPDYIHVRARRGQATDSHSL           KM++LQDLVPGCN+IT
Sbjct: 172 ISPNASKVSGSPKPDYIHVRARRGQATDSHSLAERARREKISKKMKYLQDLVPGCNKIT 230


>tpg|DAA40453.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 329

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = -2

Query: 205 VVEVDSRKRRRGDLKTKTLDPKPDYIHVRARRGQATDSHSLXXXXXXXXXXXKMQFLQDL 26
           +VEV ++K+ +G      ++P  DY+HVRARRGQATDSHSL           +M+FLQDL
Sbjct: 129 LVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 188

Query: 25  VPGCNQI 5
           VPGCN++
Sbjct: 189 VPGCNKV 195


>tpg|DAA40452.1| TPA: putative HLH DNA-binding domain superfamily protein [Zea mays]
          Length = 312

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = -2

Query: 205 VVEVDSRKRRRGDLKTKTLDPKPDYIHVRARRGQATDSHSLXXXXXXXXXXXKMQFLQDL 26
           +VEV ++K+ +G      ++P  DY+HVRARRGQATDSHSL           +M+FLQDL
Sbjct: 129 LVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 188

Query: 25  VPGCNQI 5
           VPGCN++
Sbjct: 189 VPGCNKV 195


>ref|NP_001169219.1| putative HLH DNA-binding domain superfamily protein [Zea mays]
           gi|223975629|gb|ACN32002.1| unknown [Zea mays]
           gi|414589883|tpg|DAA40454.1| TPA: putative HLH
           DNA-binding domain superfamily protein [Zea mays]
          Length = 350

 Score = 73.6 bits (179), Expect = 4e-11
 Identities = 34/67 (50%), Positives = 46/67 (68%)
 Frame = -2

Query: 205 VVEVDSRKRRRGDLKTKTLDPKPDYIHVRARRGQATDSHSLXXXXXXXXXXXKMQFLQDL 26
           +VEV ++K+ +G      ++P  DY+HVRARRGQATDSHSL           +M+FLQDL
Sbjct: 129 LVEVKAQKKGKGKSSKPAVEPPKDYVHVRARRGQATDSHSLAERVRREKISQRMKFLQDL 188

Query: 25  VPGCNQI 5
           VPGCN++
Sbjct: 189 VPGCNKV 195


Top