BLASTX nr result

ID: Atractylodes21_contig00000233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000233
         (1002 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527484.1| conserved hypothetical protein [Ricinus comm...   128   2e-27
gb|AAG51778.1|AC079674_11 RING-H2 finger protein RHY1a; 24780-23...   107   4e-21
ref|XP_002313898.1| predicted protein [Populus trichocarpa] gi|2...   106   8e-21
ref|XP_002300256.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
ref|NP_564556.1| RING/U-box domain-containing protein [Arabidops...   102   1e-19

>ref|XP_002527484.1| conserved hypothetical protein [Ricinus communis]
           gi|223533124|gb|EEF34882.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 282

 Score =  128 bits (321), Expect = 2e-27
 Identities = 93/296 (31%), Positives = 121/296 (40%), Gaps = 16/296 (5%)
 Frame = +3

Query: 18  MTSASELFHNRRYRIGLRHNAVDVSGFXXXXXXXXXXXXXXXXXXXXXXXXXXYGGQNNR 197
           MTSASELF+ RR R+G     ++                              +   +  
Sbjct: 1   MTSASELFYQRRSRVGRADLELESD------------------RNFHFNYTRRHPHHHTH 42

Query: 198 REHRHDLDVCDPASRRI--HRRRLLDHSEHEPVVHPEQGRSQSPSGSIINSDDLRNIQRR 371
              RHDLD CDP+ R     R RL  HS+   V   +Q  SQ   G+ IN++ L +  R 
Sbjct: 43  THSRHDLDGCDPSRRSSPHFRHRLSSHSDRASV-RLDQATSQLAPGNSINTETLSSTSRP 101

Query: 372 RATGSDRLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQDGFPSNANNGFIGTDD- 548
           R TG+DRLPG                               +   F    +   + T D 
Sbjct: 102 RMTGNDRLPGAVLLARARLLERLRGVSLSGNRRSSRASFGIYDREFTFGDDLRIVDTGDW 161

Query: 549 --------NXXXXXXXXXXXXXXXXXXXQETRKKHTPGLAEDVLNCLQPEAFSN-----D 689
                   +                   +E+ KK  PGL  + L CLQ E FS+     +
Sbjct: 162 RTDIAPGRSSRGTSFTESIYTTERLQLAEESYKKKPPGLTPEDLECLQLEIFSSWEKGVE 221

Query: 690 GKSDETSRECTICLEGFQDGDKLIRLRCTHSFHSCCLYPWVRVCGACPNCRKPIVV 857
           G   + S +C+ICLE F+DGDKLI L C H FHS CL PWVR CG CP CR+ I V
Sbjct: 222 GIVSQASWDCSICLESFKDGDKLICLPCNHRFHSSCLDPWVRTCGDCPYCRRDIAV 277


>gb|AAG51778.1|AC079674_11 RING-H2 finger protein RHY1a; 24780-23662 [Arabidopsis thaliana]
          Length = 248

 Score =  107 bits (267), Expect = 4e-21
 Identities = 89/294 (30%), Positives = 113/294 (38%), Gaps = 16/294 (5%)
 Frame = +3

Query: 18  MTSASELFHNRRYRIGLRHNAV--DVSGFXXXXXXXXXXXXXXXXXXXXXXXXXXYGGQN 191
           MTSASELF  RR R G    A+  D S +                          +   +
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYR-------------------------HHSHH 35

Query: 192 NRREH-------RHDLDVCDPASRRIHR-RRLLDHSEHEPVVHPEQGRSQSPSGSIINSD 347
           + R H       RHD D CDP  R   R RR   H E    +   QG SQ      +N+D
Sbjct: 36  HHRRHGVHHHNQRHDSDGCDPLRRPTPRLRRFFHHPERSRPIRDVQGTSQ-----YLNTD 90

Query: 348 ----DLRNIQRRRATGSDRLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQDGFPS 515
               + ++       GS+RLPG                                     S
Sbjct: 91  STDTETQSSSFVNLNGSERLPGAVLLARDRLFERLRGV------------------SLSS 132

Query: 516 NANNGFIGTDDNXXXXXXXXXXXXXXXXXXXQETRK--KHTPGLAEDVLNCLQPEAFSND 689
           N+ +  +  DD                    Q T +  K   GL +D +NCL  + FS+ 
Sbjct: 133 NSRSNRVSLDDQRESSFHSIDGDPIFQLAGLQVTYECNKKPQGLTQDAINCLHRQTFSSA 192

Query: 690 GKSDETSRECTICLEGFQDGDKLIRLRCTHSFHSCCLYPWVRVCGACPNCRKPI 851
               E  R+C+ICLE F  GD LI L CTHSFHS CL PW+R CG CP CR+ I
Sbjct: 193 EVKSEM-RDCSICLESFTKGDMLISLPCTHSFHSSCLNPWLRACGDCPCCRRAI 245


>ref|XP_002313898.1| predicted protein [Populus trichocarpa] gi|222850306|gb|EEE87853.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  106 bits (265), Expect = 8e-21
 Identities = 48/88 (54%), Positives = 60/88 (68%), Gaps = 5/88 (5%)
 Frame = +3

Query: 609 QETRKKHTPGLAEDVLNCLQPEAFSN-----DGKSDETSRECTICLEGFQDGDKLIRLRC 773
           QE+ KK  PGL +D L+CLQ E FS+     +G   + S +C+ICLE F +GD+LIRL C
Sbjct: 143 QESHKKKPPGLTQDALHCLQSEVFSSVEKGIEGGVSQVSWDCSICLESFTEGDELIRLPC 202

Query: 774 THSFHSCCLYPWVRVCGACPNCRKPIVV 857
            H FHS CL PWVR CG CP CR+ +VV
Sbjct: 203 EHRFHSACLDPWVRTCGDCPYCRRDVVV 230


>ref|XP_002300256.1| predicted protein [Populus trichocarpa] gi|222847514|gb|EEE85061.1|
           predicted protein [Populus trichocarpa]
          Length = 87

 Score =  105 bits (263), Expect = 1e-20
 Identities = 50/86 (58%), Positives = 57/86 (66%), Gaps = 5/86 (5%)
 Frame = +3

Query: 609 QETRKKHTPGLAEDVLNCLQPEAFSNDGK-----SDETSRECTICLEGFQDGDKLIRLRC 773
           QE+ KK  PGL +D L CLQ E FS  GK     S   SR+C+ICLE F +GD+LIRL C
Sbjct: 2   QESCKKKPPGLTQDALQCLQSEVFSCLGKGIEGGSSPVSRDCSICLESFSEGDELIRLPC 61

Query: 774 THSFHSCCLYPWVRVCGACPNCRKPI 851
            H FHS CL PWVR CG CP CR+ I
Sbjct: 62  DHRFHSACLDPWVRTCGDCPYCRRDI 87


>ref|NP_564556.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|28416631|gb|AAO42846.1| At1g49850 [Arabidopsis
           thaliana] gi|110735885|dbj|BAE99918.1| RING-H2 finger
           protein RHY1a [Arabidopsis thaliana]
           gi|332194362|gb|AEE32483.1| RING/U-box domain-containing
           protein [Arabidopsis thaliana]
          Length = 250

 Score =  102 bits (255), Expect = 1e-19
 Identities = 88/298 (29%), Positives = 113/298 (37%), Gaps = 20/298 (6%)
 Frame = +3

Query: 18  MTSASELFHNRRYRIGLRHNAV--DVSGFXXXXXXXXXXXXXXXXXXXXXXXXXXYGGQN 191
           MTSASELF  RR R G    A+  D S +                          +   +
Sbjct: 1   MTSASELFSTRRSRPGRSDPALESDTSSYR-------------------------HHSHH 35

Query: 192 NRREH-------RHDLDVCDPASRRIHRRRLLDHSEHEPVVHPEQGRSQ-----SPSGSI 335
           + R H       RHD D CDP  R   R R   H       HP Q RS+       +   
Sbjct: 36  HHRRHGVHHHNQRHDSDGCDPLRRPTPRLRRFFH-------HPIQERSRPIRDVQGTSQY 88

Query: 336 INSD----DLRNIQRRRATGSDRLPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTHQD 503
           +N+D    + ++       GS+RLPG                                  
Sbjct: 89  LNTDSTDTETQSSSFVNLNGSERLPGAVLLARDRLFERLRGV------------------ 130

Query: 504 GFPSNANNGFIGTDDNXXXXXXXXXXXXXXXXXXXQETRK--KHTPGLAEDVLNCLQPEA 677
              SN+ +  +  DD                    Q T +  K   GL +D +NCL  + 
Sbjct: 131 SLSSNSRSNRVSLDDQRESSFHSIDGDPIFQLAGLQVTYECNKKPQGLTQDAINCLHRQT 190

Query: 678 FSNDGKSDETSRECTICLEGFQDGDKLIRLRCTHSFHSCCLYPWVRVCGACPNCRKPI 851
           FS+     E  R+C+ICLE F  GD LI L CTHSFHS CL PW+R CG CP CR+ I
Sbjct: 191 FSSAEVKSEM-RDCSICLESFTKGDMLISLPCTHSFHSSCLNPWLRACGDCPCCRRAI 247


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