BLASTX nr result

ID: Atractylodes21_contig00000125 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000125
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37720.3| unnamed protein product [Vitis vinifera]               95   7e-18
ref|XP_002279994.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18
ref|XP_002312792.1| predicted protein [Populus trichocarpa] gi|2...    89   3e-16
ref|XP_004144958.1| PREDICTED: pentatricopeptide repeat-containi...    88   8e-16
ref|XP_002514404.1| conserved hypothetical protein [Ricinus comm...    87   1e-15

>emb|CBI37720.3| unnamed protein product [Vitis vinifera]
          Length = 208

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 40/79 (50%), Positives = 62/79 (78%)
 Frame = -1

Query: 401 GFNVLLETLISYNITGLVMDCFELMKEIGCEPDRSMFKLVVSHLESKGETSLSESIRQEA 222
           GFN LL TLI +++TG  M+CF+LMK  GCEP++S F++++  LESKGE  +S +++ +A
Sbjct: 125 GFNALLRTLIDFDMTGPAMECFQLMKTSGCEPNKSSFRILIKGLESKGELDISATVKLDA 184

Query: 221 RKYYGDSLNFLDEQEEEMV 165
           +KY+G+SL FL+E+E+  V
Sbjct: 185 QKYFGESLEFLEEEEDMTV 203


>ref|XP_002279994.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46870
           [Vitis vinifera]
          Length = 246

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 40/79 (50%), Positives = 62/79 (78%)
 Frame = -1

Query: 401 GFNVLLETLISYNITGLVMDCFELMKEIGCEPDRSMFKLVVSHLESKGETSLSESIRQEA 222
           GFN LL TLI +++TG  M+CF+LMK  GCEP++S F++++  LESKGE  +S +++ +A
Sbjct: 163 GFNALLRTLIDFDMTGPAMECFQLMKTSGCEPNKSSFRILIKGLESKGELDISATVKLDA 222

Query: 221 RKYYGDSLNFLDEQEEEMV 165
           +KY+G+SL FL+E+E+  V
Sbjct: 223 QKYFGESLEFLEEEEDMTV 241


>ref|XP_002312792.1| predicted protein [Populus trichocarpa] gi|222849200|gb|EEE86747.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 48/82 (58%), Positives = 61/82 (74%), Gaps = 2/82 (2%)
 Frame = -1

Query: 398 FNVLLETLISYNITGLVMDCFELMKEI--GCEPDRSMFKLVVSHLESKGETSLSESIRQE 225
           FN LL TLIS+ + GLVM+C+E MK +  GCEPDRS FKL+V+ LES GE  LS  +RQ+
Sbjct: 137 FNQLLATLISFKLGGLVMECYEWMKSVVVGCEPDRSTFKLLVNGLESIGEFELSVVVRQD 196

Query: 224 ARKYYGDSLNFLDEQEEEMVMS 159
           A K+YG+SL+F  E EEE + S
Sbjct: 197 AYKFYGESLDF--EAEEEGIAS 216


>ref|XP_004144958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449473007|ref|XP_004153757.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
           gi|449517150|ref|XP_004165609.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At3g46870-like [Cucumis sativus]
          Length = 249

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 37/76 (48%), Positives = 59/76 (77%)
 Frame = -1

Query: 401 GFNVLLETLISYNITGLVMDCFELMKEIGCEPDRSMFKLVVSHLESKGETSLSESIRQEA 222
           GFN LL+ L+S+N+  L M+ + LMK++GCEPD++ F++V+  LESKGE     +++Q+A
Sbjct: 166 GFNALLKALVSHNLGELAMESYYLMKDVGCEPDKASFRIVIKGLESKGEAVDLRTVKQDA 225

Query: 221 RKYYGDSLNFLDEQEE 174
           ++ YG+SL FL+E+EE
Sbjct: 226 QRLYGESLEFLEEEEE 241


>ref|XP_002514404.1| conserved hypothetical protein [Ricinus communis]
           gi|223546501|gb|EEF48000.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 248

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 38/76 (50%), Positives = 57/76 (75%)
 Frame = -1

Query: 398 FNVLLETLISYNITGLVMDCFELMKEIGCEPDRSMFKLVVSHLESKGETSLSESIRQEAR 219
           FN L  TLI++N++G  M+ + LMK + CEPDR  F+++++ LES GE+S S  +RQ+A 
Sbjct: 172 FNALFTTLITFNLSGFAMEFYGLMKAVKCEPDRLTFRILINGLESMGESSASAILRQDAH 231

Query: 218 KYYGDSLNFLDEQEEE 171
           K+YG SL FL+E+E+E
Sbjct: 232 KFYGQSLEFLEEEEDE 247


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