BLASTX nr result
ID: Atractylodes21_contig00000115
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Atractylodes21_contig00000115
(1360 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-... 124 6e-26
ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-... 123 1e-25
ref|XP_002510553.1| zinc finger protein, putative [Ricinus commu... 119 2e-24
ref|XP_002866641.1| hypothetical protein ARALYDRAFT_496711 [Arab... 105 3e-20
ref|NP_201297.1| E3 ubiquitin-protein ligase CIP8 [Arabidopsis t... 103 8e-20
>ref|XP_003555834.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Glycine max]
Length = 337
Score = 124 bits (311), Expect = 6e-26
Identities = 64/84 (76%), Positives = 69/84 (82%)
Frame = +2
Query: 506 ASRAASRRNRILDWAEILMGLEDQSIEFRLQVPGDDDGYVGNPGDYVDSAGYEALLQNLA 685
A+R S RNRILDWAEILMGLED SIEFRLQ+P + D YVGNP DYVD+A YEALLQ LA
Sbjct: 166 ATRTRSMRNRILDWAEILMGLEDNSIEFRLQLP-ESDRYVGNPEDYVDAAEYEALLQTLA 224
Query: 686 ESDSSGRRGAPPASKLAVEGLQTV 757
ESD GRRGAPPASK A+E L TV
Sbjct: 225 ESDGGGRRGAPPASKAALEALPTV 248
Score = 101 bits (251), Expect = 5e-19
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +2
Query: 8 YWCYQCDKQVPVETRPDHPDIICFECKNGFVELISVPSHARQVS-EEDTPAFGNEFLQVL 184
YWCY C+K+V VET + PD++C ECKNGFVE + PS +R S D P FG++FLQVL
Sbjct: 17 YWCYHCEKRVSVETLANLPDVVCGECKNGFVESMPTPSRSRSPSASSDDPYFGSQFLQVL 76
Query: 185 RLIAQAARXXXXXXXXXSDHPAGDNDYLRIELDGW 289
RLIAQ+AR + +ND+LRIEL GW
Sbjct: 77 RLIAQSARDDDASPPPPPSR-SPENDFLRIELGGW 110
Score = 78.2 bits (191), Expect = 5e-12
Identities = 31/38 (81%), Positives = 34/38 (89%)
Frame = +3
Query: 906 AKQLQCGHMYHGDCIVPWLGSRNTCPVCRYELPTDDPE 1019
AK+L CGH YHGDCIVPWL SRN+CPVCR+ELPTDD E
Sbjct: 272 AKRLPCGHRYHGDCIVPWLSSRNSCPVCRFELPTDDKE 309
>ref|XP_003536743.1| PREDICTED: E3 ubiquitin-protein ligase CIP8-like isoform 1 [Glycine
max] gi|356536437|ref|XP_003536744.1| PREDICTED: E3
ubiquitin-protein ligase CIP8-like isoform 2 [Glycine
max]
Length = 333
Score = 123 bits (309), Expect = 1e-25
Identities = 64/84 (76%), Positives = 68/84 (80%)
Frame = +2
Query: 506 ASRAASRRNRILDWAEILMGLEDQSIEFRLQVPGDDDGYVGNPGDYVDSAGYEALLQNLA 685
A+R S RNRILDWAEILMGLED SIEFRLQ+P + D YVGNP DYVD+A YEALL LA
Sbjct: 169 ATRTRSMRNRILDWAEILMGLEDNSIEFRLQLP-ESDRYVGNPEDYVDAAEYEALLHTLA 227
Query: 686 ESDSSGRRGAPPASKLAVEGLQTV 757
ESD GRRGAPPASK AVE L TV
Sbjct: 228 ESDGGGRRGAPPASKAAVEALPTV 251
Score = 102 bits (253), Expect = 3e-19
Identities = 50/95 (52%), Positives = 63/95 (66%), Gaps = 1/95 (1%)
Frame = +2
Query: 8 YWCYQCDKQVPVETRPDHPDIICFECKNGFVELISVPSHARQVS-EEDTPAFGNEFLQVL 184
YWCY C+K+V +ET + PD++C ECKNGFVE I PS +R S D P FG++FLQVL
Sbjct: 21 YWCYHCEKRVSIETLANLPDVVCGECKNGFVESIHTPSRSRSPSASSDDPYFGSQFLQVL 80
Query: 185 RLIAQAARXXXXXXXXXSDHPAGDNDYLRIELDGW 289
RLIAQ+AR + +ND+LRIEL GW
Sbjct: 81 RLIAQSARDDDASPPPPPSR-SPENDFLRIELGGW 114
Score = 79.7 bits (195), Expect = 2e-12
Identities = 32/39 (82%), Positives = 35/39 (89%)
Frame = +3
Query: 903 IAKQLQCGHMYHGDCIVPWLGSRNTCPVCRYELPTDDPE 1019
+AK+L CGH YHGDCIVPWL SRN+CPVCRYELPTDD E
Sbjct: 274 LAKRLPCGHGYHGDCIVPWLSSRNSCPVCRYELPTDDKE 312
>ref|XP_002510553.1| zinc finger protein, putative [Ricinus communis]
gi|223551254|gb|EEF52740.1| zinc finger protein,
putative [Ricinus communis]
Length = 358
Score = 119 bits (297), Expect = 2e-24
Identities = 63/83 (75%), Positives = 69/83 (83%)
Frame = +2
Query: 506 ASRAASRRNRILDWAEILMGLEDQSIEFRLQVPGDDDGYVGNPGDYVDSAGYEALLQNLA 685
A+RA S RNRILDWAEILMGLED SIEF L+VP + D Y+GNP DYVD+AGYEALLQNLA
Sbjct: 185 ATRARSGRNRILDWAEILMGLEDNSIEFLLEVP-ETDRYIGNPEDYVDAAGYEALLQNLA 243
Query: 686 ESDSSGRRGAPPASKLAVEGLQT 754
ESD GRRGAPPASK +V L T
Sbjct: 244 ESD-DGRRGAPPASKSSVSALPT 265
Score = 96.7 bits (239), Expect = 1e-17
Identities = 49/101 (48%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Frame = +2
Query: 5 QYWCYQCDKQVPVETRPDHPDIICFECKNGFVELISV----PSHARQVSEE--DTPAFGN 166
QYWCY+C K+V ET + D+IC ECKNGFVELI+ PS+ ++ + D FG+
Sbjct: 21 QYWCYRCIKRVSTETLANESDVICLECKNGFVELITAAATPPSNTPSLTSDQADDSTFGS 80
Query: 167 EFLQVLRLIAQAARXXXXXXXXXSDHPAGDNDYLRIELDGW 289
+FLQ+LR+IAQAAR D P ++D+LRIEL+GW
Sbjct: 81 QFLQMLRIIAQAAREEDTPPPLPQD-PYSEDDFLRIELNGW 120
Score = 73.6 bits (179), Expect = 1e-10
Identities = 29/36 (80%), Positives = 32/36 (88%)
Frame = +3
Query: 912 QLQCGHMYHGDCIVPWLGSRNTCPVCRYELPTDDPE 1019
+L C H YHGDCIVPWLGSRN+CPVCR+ELPTDD E
Sbjct: 292 KLPCDHGYHGDCIVPWLGSRNSCPVCRFELPTDDTE 327
>ref|XP_002866641.1| hypothetical protein ARALYDRAFT_496711 [Arabidopsis lyrata subsp.
lyrata] gi|297312476|gb|EFH42900.1| hypothetical protein
ARALYDRAFT_496711 [Arabidopsis lyrata subsp. lyrata]
Length = 330
Score = 105 bits (262), Expect = 3e-20
Identities = 55/85 (64%), Positives = 66/85 (77%), Gaps = 3/85 (3%)
Frame = +2
Query: 509 SRAASRRNRILDWAEILMGLEDQSIEFRLQVPGDDDGYVGNPGDYV-DSAGYEALLQNLA 685
+R+ + RNRILDWAEILMG+ED SIEFR+ + + Y GNP DY+ DSAGYEALLQNLA
Sbjct: 161 TRSRTGRNRILDWAEILMGIEDNSIEFRM----ESERYTGNPADYIDDSAGYEALLQNLA 216
Query: 686 ESD--SSGRRGAPPASKLAVEGLQT 754
E D GRRGAPPA+K A+E L+T
Sbjct: 217 EGDGGGGGRRGAPPAAKSAIEALET 241
Score = 72.4 bits (176), Expect(2) = 2e-10
Identities = 27/37 (72%), Positives = 33/37 (89%)
Frame = +3
Query: 909 KQLQCGHMYHGDCIVPWLGSRNTCPVCRYELPTDDPE 1019
K+L CGH YHGDCI+PWLG+RN+CPVCR++L TDD E
Sbjct: 269 KKLPCGHCYHGDCIMPWLGTRNSCPVCRFQLQTDDAE 305
Score = 20.4 bits (41), Expect(2) = 2e-10
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +2
Query: 1115 RKKRSVTMTASAT 1153
RKKR+ TM+ SAT
Sbjct: 310 RKKRTSTMSDSAT 322
>ref|NP_201297.1| E3 ubiquitin-protein ligase CIP8 [Arabidopsis thaliana]
gi|61211690|sp|Q9SPL2.1|CIP8_ARATH RecName: Full=E3
ubiquitin-protein ligase CIP8; AltName:
Full=COP1-interacting protein 8
gi|5929906|gb|AAD56636.1|AF162150_1 COP1-interacting
protein CIP8 [Arabidopsis thaliana]
gi|8843756|dbj|BAA97304.1| COP1-interacting protein CIP8
[Arabidopsis thaliana] gi|19698865|gb|AAL91168.1|
COP1-interacting protein CIP8 [Arabidopsis thaliana]
gi|30984560|gb|AAP42743.1| At5g64920 [Arabidopsis
thaliana] gi|111146876|gb|ABH07378.1| COP1-interacting
protein 8 [Arabidopsis thaliana]
gi|332010587|gb|AED97970.1| E3 ubiquitin-protein ligase
CIP8 [Arabidopsis thaliana]
Length = 334
Score = 103 bits (258), Expect = 8e-20
Identities = 54/86 (62%), Positives = 66/86 (76%), Gaps = 4/86 (4%)
Frame = +2
Query: 509 SRAASRRNRILDWAEILMGLEDQSIEFRLQVPGDDDGYVGNPGDYV-DSAGYEALLQNLA 685
+++ + RNRILDWAEILMG+ED SIEFR+ + D Y GNP DY+ D+AGYEALLQNLA
Sbjct: 162 TQSRTGRNRILDWAEILMGIEDNSIEFRM----ESDRYAGNPADYIDDAAGYEALLQNLA 217
Query: 686 ESD---SSGRRGAPPASKLAVEGLQT 754
E D GRRGAPPA+K A+E L+T
Sbjct: 218 EGDGGGGGGRRGAPPAAKSAIEALET 243
Score = 73.6 bits (179), Expect = 1e-10
Identities = 28/37 (75%), Positives = 33/37 (89%)
Frame = +3
Query: 909 KQLQCGHMYHGDCIVPWLGSRNTCPVCRYELPTDDPE 1019
K+L CGH YHGDCIVPWLG+RN+CPVCR++L TDD E
Sbjct: 271 KKLPCGHCYHGDCIVPWLGTRNSCPVCRFQLETDDAE 307