BLASTX nr result

ID: Atractylodes21_contig00000010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Atractylodes21_contig00000010
         (1091 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001189710.1| RabGAP/TBC domain-containing protein [Arabid...    56   7e-15
ref|NP_181460.3| RabGAP/TBC domain-containing protein [Arabidops...    56   7e-15
ref|XP_002315267.1| predicted protein [Populus trichocarpa] gi|2...    55   1e-14
tpg|DAA44781.1| TPA: hypothetical protein ZEAMMB73_028041 [Zea m...    54   3e-14
tpg|DAA44782.1| TPA: hypothetical protein ZEAMMB73_028041 [Zea m...    54   3e-14

>ref|NP_001189710.1| RabGAP/TBC domain-containing protein [Arabidopsis thaliana]
           gi|330254560|gb|AEC09654.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
          Length = 772

 Score = 56.2 bits (134), Expect(2) = 7e-15
 Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 8/53 (15%)
 Frame = +3

Query: 3   ACV*GVGWFL------LP--PVLRVWDVLLFQGSRVMLFRTTVALMELYGICL 137
           ACV G  WFL      LP   VLRVWDVLLF+G+RVMLFRT +ALME YG  L
Sbjct: 436 ACVTGP-WFLTIFINMLPWESVLRVWDVLLFEGNRVMLFRTALALMEFYGPAL 487



 Score = 51.2 bits (121), Expect(2) = 7e-15
 Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 3/40 (7%)
 Frame = +1

Query: 241 FVGPALVTTKDTGDAITLLQSLAG*TFDSMNL---HCVGH 351
           F GPALVTTKD GDA+TLLQS+ G TFDS  L    C+G+
Sbjct: 482 FYGPALVTTKDIGDAVTLLQSMTGSTFDSSQLVFTACMGY 521


>ref|NP_181460.3| RabGAP/TBC domain-containing protein [Arabidopsis thaliana]
           gi|330254559|gb|AEC09653.1| RabGAP/TBC domain-containing
           protein [Arabidopsis thaliana]
          Length = 749

 Score = 56.2 bits (134), Expect(2) = 7e-15
 Identities = 34/53 (64%), Positives = 37/53 (69%), Gaps = 8/53 (15%)
 Frame = +3

Query: 3   ACV*GVGWFL------LP--PVLRVWDVLLFQGSRVMLFRTTVALMELYGICL 137
           ACV G  WFL      LP   VLRVWDVLLF+G+RVMLFRT +ALME YG  L
Sbjct: 408 ACVTGP-WFLTIFINMLPWESVLRVWDVLLFEGNRVMLFRTALALMEFYGPAL 459



 Score = 51.2 bits (121), Expect(2) = 7e-15
 Identities = 26/40 (65%), Positives = 30/40 (75%), Gaps = 3/40 (7%)
 Frame = +1

Query: 241 FVGPALVTTKDTGDAITLLQSLAG*TFDSMNL---HCVGH 351
           F GPALVTTKD GDA+TLLQS+ G TFDS  L    C+G+
Sbjct: 454 FYGPALVTTKDIGDAVTLLQSMTGSTFDSSQLVFTACMGY 493


>ref|XP_002315267.1| predicted protein [Populus trichocarpa] gi|222864307|gb|EEF01438.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score = 54.7 bits (130), Expect(2) = 1e-14
 Identities = 30/46 (65%), Positives = 34/46 (73%), Gaps = 8/46 (17%)
 Frame = +3

Query: 24  WFL------LP--PVLRVWDVLLFQGSRVMLFRTTVALMELYGICL 137
           WFL      LP   VLRVWDVLL++G+RVMLFRT +ALMELYG  L
Sbjct: 419 WFLSIFMNMLPWESVLRVWDVLLYEGNRVMLFRTALALMELYGPAL 464



 Score = 52.0 bits (123), Expect(2) = 1e-14
 Identities = 27/38 (71%), Positives = 30/38 (78%), Gaps = 3/38 (7%)
 Frame = +1

Query: 247 GPALVTTKDTGDAITLLQSLAG*TFDSMNL---HCVGH 351
           GPALVTTKD GDA+TLLQSLAG TFDS  L    C+G+
Sbjct: 461 GPALVTTKDAGDAVTLLQSLAGSTFDSSQLVFTACMGY 498


>tpg|DAA44781.1| TPA: hypothetical protein ZEAMMB73_028041 [Zea mays]
          Length = 870

 Score = 53.9 bits (128), Expect(2) = 3e-14
 Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 8/46 (17%)
 Frame = +3

Query: 24  WFL------LP--PVLRVWDVLLFQGSRVMLFRTTVALMELYGICL 137
           WFL      LP   VLR+WDV+LF+G+R+MLFRTT+AL++LYG  L
Sbjct: 493 WFLSIFINMLPWESVLRIWDVILFEGNRIMLFRTTLALLDLYGPAL 538



 Score = 51.6 bits (122), Expect(2) = 3e-14
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +1

Query: 247 GPALVTTKDTGDAITLLQSLAG*TFDSMNL 336
           GPALVTTKD GDAITLLQSLAG TFDS  L
Sbjct: 535 GPALVTTKDAGDAITLLQSLAGSTFDSSQL 564


>tpg|DAA44782.1| TPA: hypothetical protein ZEAMMB73_028041 [Zea mays]
          Length = 866

 Score = 53.9 bits (128), Expect(2) = 3e-14
 Identities = 27/46 (58%), Positives = 35/46 (76%), Gaps = 8/46 (17%)
 Frame = +3

Query: 24  WFL------LP--PVLRVWDVLLFQGSRVMLFRTTVALMELYGICL 137
           WFL      LP   VLR+WDV+LF+G+R+MLFRTT+AL++LYG  L
Sbjct: 488 WFLSIFINMLPWESVLRIWDVILFEGNRIMLFRTTLALLDLYGPAL 533



 Score = 51.6 bits (122), Expect(2) = 3e-14
 Identities = 26/30 (86%), Positives = 26/30 (86%)
 Frame = +1

Query: 247 GPALVTTKDTGDAITLLQSLAG*TFDSMNL 336
           GPALVTTKD GDAITLLQSLAG TFDS  L
Sbjct: 530 GPALVTTKDAGDAITLLQSLAGSTFDSSQL 559


Top