BLASTX nr result

ID: Astragalus24_contig00008608 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus24_contig00008608
         (423 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004511979.1| PREDICTED: nuclear pore complex protein NUP5...    64   6e-09

>ref|XP_004511979.1| PREDICTED: nuclear pore complex protein NUP58 [Cicer arietinum]
          Length = 493

 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 39/68 (57%), Positives = 41/68 (60%), Gaps = 4/68 (5%)
 Frame = +3

Query: 99  TPAPG-SWFG---ATPQTSLFGXXXXXXXXXXXXXXXFSNSTPMFSSTPATPAAGSLFST 266
           TPAPG SWF    ATPQTSLFG               FSN+TP+FSS   TPA GSLFST
Sbjct: 407 TPAPGASWFASSSATPQTSLFGSASSSLPGATSTPSLFSNATPLFSS---TPAGGSLFST 463

Query: 267 PFASEKST 290
           PFAS   T
Sbjct: 464 PFASGTPT 471


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