BLASTX nr result

ID: Astragalus23_contig00031944 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00031944
         (429 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB00038.1| reverse transcriptase family member [Glycine max]       52   4e-10
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    47   8e-08
gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu...    41   2e-07
gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanu...    41   2e-07
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...    42   8e-06

>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score = 51.6 bits (122), Expect(3) = 4e-10
 Identities = 29/47 (61%), Positives = 33/47 (70%)
 Frame = -3

Query: 307 LTRSKMVYMEC*FN*RHTNFNSSSEVKIGDHIISQVSCLHILGSIIQ 167
           L+RSK  YMEC FN R     S+SEVKIGDHII QV+    LGS+IQ
Sbjct: 154 LSRSKSEYMECQFNKRRV---SNSEVKIGDHIIPQVTRFKYLGSVIQ 197



 Score = 34.7 bits (78), Expect(3) = 4e-10
 Identities = 16/29 (55%), Positives = 20/29 (68%)
 Frame = -1

Query: 396 FASDICLAGDLREEINGKLEM*RQAFEVH 310
           FA DI L G+ REE+N +LE  R+A E H
Sbjct: 122 FADDIVLLGESREELNERLETWRRALETH 150



 Score = 25.0 bits (53), Expect(3) = 4e-10
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 194 FTHLGFYHTNARKIEGNLNHRSQVG 120
           F +LG    +  +IEG++NHR Q G
Sbjct: 189 FKYLGSVIQDDGEIEGDVNHRIQAG 213


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 46.6 bits (109), Expect(2) = 8e-08
 Identities = 26/51 (50%), Positives = 34/51 (66%)
 Frame = -3

Query: 307 LTRSKMVYMEC*FN*RHTNFNSSSEVKIGDHIISQVSCLHILGSIIQMLGK 155
           L+RSK  YMEC F+ R +   S+ EVK+GDHII QV+    LGS +Q  G+
Sbjct: 407 LSRSKTKYMECNFSGRRSR--STLEVKVGDHIIPQVTRFKYLGSFVQNDGE 455



 Score = 37.4 bits (85), Expect(2) = 8e-08
 Identities = 16/29 (55%), Positives = 21/29 (72%)
 Frame = -1

Query: 396 FASDICLAGDLREEINGKLEM*RQAFEVH 310
           FA D+ L G+ REE+NG+LE  RQA E +
Sbjct: 375 FADDVVLVGESREEVNGRLETWRQALEAY 403


>gb|KYP56875.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 925

 Score = 40.8 bits (94), Expect(3) = 2e-07
 Identities = 22/47 (46%), Positives = 32/47 (68%)
 Frame = -3

Query: 307 LTRSKMVYMEC*FN*RHTNFNSSSEVKIGDHIISQVSCLHILGSIIQ 167
           ++RSK  YMEC F+ R+T   ++ EVKIG+  I++V     LGSI+Q
Sbjct: 787 ISRSKTEYMECKFSMRNTR--ATQEVKIGEQAITKVPRFKYLGSIVQ 831



 Score = 38.5 bits (88), Expect(3) = 2e-07
 Identities = 19/29 (65%), Positives = 20/29 (68%)
 Frame = -1

Query: 396 FASDICLAGDLREEINGKLEM*RQAFEVH 310
           FA DI L GD REEIN K+E  RQA E H
Sbjct: 755 FADDIVLTGDSREEINEKIERWRQALEEH 783



 Score = 22.3 bits (46), Expect(3) = 2e-07
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 194 FTHLGFYHTNARKIEGNLNHRSQVG 120
           F +LG       ++EG+++HR Q G
Sbjct: 823 FKYLGSIVQQDAELEGDVHHRIQAG 847


>gb|KYP34423.1| Retrovirus-related Pol polyprotein LINE-1 [Cajanus cajan]
          Length = 819

 Score = 40.8 bits (94), Expect(3) = 2e-07
 Identities = 22/47 (46%), Positives = 32/47 (68%)
 Frame = -3

Query: 307 LTRSKMVYMEC*FN*RHTNFNSSSEVKIGDHIISQVSCLHILGSIIQ 167
           ++RSK  YMEC F+ R+T   ++ EVKIG+  I++V     LGSI+Q
Sbjct: 595 ISRSKTEYMECKFSMRNTR--ATQEVKIGEQAITKVPRFKYLGSIVQ 639



 Score = 38.5 bits (88), Expect(3) = 2e-07
 Identities = 19/29 (65%), Positives = 20/29 (68%)
 Frame = -1

Query: 396 FASDICLAGDLREEINGKLEM*RQAFEVH 310
           FA DI L GD REEIN K+E  RQA E H
Sbjct: 563 FADDIVLTGDSREEINEKIERWRQALEEH 591



 Score = 22.3 bits (46), Expect(3) = 2e-07
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 194 FTHLGFYHTNARKIEGNLNHRSQVG 120
           F +LG       ++EG+++HR Q G
Sbjct: 631 FKYLGSIVQQDAELEGDVHHRIQAG 655


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 41.6 bits (96), Expect(2) = 8e-06
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = -3

Query: 307  LTRSKMVYMEC*FN*RHTNFNSSSEVKIGDHIISQVSCLHILGSIIQMLGK 155
            ++RSK  YMEC F+ R  N  S+ EVKIG++I+ +V     LG IIQ  G+
Sbjct: 1177 ISRSKTEYMECKFSLRREN--SNIEVKIGENILRKVKSFKYLGCIIQDNGE 1225



 Score = 35.4 bits (80), Expect(2) = 8e-06
 Identities = 16/29 (55%), Positives = 22/29 (75%)
 Frame = -1

Query: 396  FASDICLAGDLREEINGKLEM*RQAFEVH 310
            FA DI L G+ RE++N KLE+ R+A EV+
Sbjct: 1145 FADDIVLMGESREDLNKKLELWREALEVY 1173


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