BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00028840
         (444 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY18017.1| copia-type polyprotein [Trifolium pratense]            148   5e-47
dbj|GAU34373.1| hypothetical protein TSUD_217130 [Trifolium subt...   143   7e-45
gb|PNX96991.1| retrotransposon-related protein [Trifolium pratense]   132   6e-43
gb|PNX98468.1| putative copia-type polyprotein, partial [Trifoli...   132   2e-42
dbj|GAU44417.1| hypothetical protein TSUD_100640 [Trifolium subt...   131   3e-42
dbj|GAU39052.1| hypothetical protein TSUD_396570 [Trifolium subt...   142   3e-42
dbj|GAU48263.1| hypothetical protein TSUD_405090 [Trifolium subt...   136   3e-42
gb|PNX95963.1| retrotransposon-related protein, partial [Trifoli...   136   3e-42
dbj|GAU18292.1| hypothetical protein TSUD_201800 [Trifolium subt...   130   5e-42
dbj|GAU43423.1| hypothetical protein TSUD_334860 [Trifolium subt...   129   5e-42
dbj|GAU51473.1| hypothetical protein TSUD_95880 [Trifolium subte...   131   1e-41
gb|PNX93875.1| copia-type polyprotein [Trifolium pratense]            128   1e-41
dbj|GAU14094.1| hypothetical protein TSUD_169190 [Trifolium subt...   127   2e-41
dbj|GAU46598.1| hypothetical protein TSUD_99480 [Trifolium subte...   126   4e-41
dbj|GAU33377.1| hypothetical protein TSUD_365030 [Trifolium subt...   130   6e-41
gb|KYP68287.1| Retrovirus-related Pol polyprotein from transposo...   132   7e-41
gb|KYP31826.1| Retrovirus-related Pol polyprotein from transposo...   132   7e-41
gb|KYP61818.1| Retrovirus-related Pol polyprotein from transposo...   132   7e-41
dbj|GAU48356.1| hypothetical protein TSUD_282590 [Trifolium subt...   129   7e-41
dbj|GAU43786.1| hypothetical protein TSUD_378110 [Trifolium subt...   132   7e-41

>gb|PNY18017.1| copia-type polyprotein [Trifolium pratense]
          Length = 999

 Score =  148 bits (374), Expect(2) = 5e-47
 Identities = 69/95 (72%), Positives = 76/95 (80%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S  F+ FC E+GIEHEVTAPYTPQHNG+AER NR I+DMARCM+K  +
Sbjct: 264 KILRTDGGGEYTSRSFESFCVENGIEHEVTAPYTPQHNGLAERRNRTILDMARCMVKHRN 323

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLEFPC 437
           LP + WGEAV TA Y LN CPTRKLKDKVP E  C
Sbjct: 324 LPKSFWGEAVNTAVYVLNKCPTRKLKDKVPEEVWC 358



 Score = 67.4 bits (163), Expect(2) = 5e-47
 Identities = 30/52 (57%), Positives = 42/52 (80%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+GGNRYF+TFVDE++R +WI YLI++K +V + FK+FK   ENQS  ++KI
Sbjct: 215 SLGGNRYFITFVDEYSRKMWI-YLIQSKDEVFDVFKRFKALVENQSSKRIKI 265


>dbj|GAU34373.1| hypothetical protein TSUD_217130 [Trifolium subterraneum]
          Length = 1210

 Score =  143 bits (361), Expect(2) = 7e-45
 Identities = 65/92 (70%), Positives = 75/92 (81%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S  F+ FC ++GIEHEVTAPYTPQHNG+AER N+ I+DMARCM+K  +
Sbjct: 574 KILRTDGGGEYTSKNFESFCVDNGIEHEVTAPYTPQHNGLAERRNKTILDMARCMVKHRN 633

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLE 428
           LP + WGEAV TA Y LN CPT+KLKDKVP E
Sbjct: 634 LPKSFWGEAVATAVYVLNRCPTKKLKDKVPEE 665



 Score = 65.1 bits (157), Expect(2) = 7e-45
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+G NRYF+TFVDEF+R +WI YLI+TK      FKKFK   ENQS  ++KI
Sbjct: 525 SLGANRYFITFVDEFSRKMWI-YLIQTKDGAFAVFKKFKALVENQSSRRIKI 575


>gb|PNX96991.1| retrotransposon-related protein [Trifolium pratense]
          Length = 1333

 Score =  132 bits (333), Expect(2) = 6e-43
 Identities = 62/92 (67%), Positives = 71/92 (77%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S EF+ FC E GI HEVTAPYTPQHNG+AER NR I++MAR M+KQ  
Sbjct: 560 KVLRTDGGGEYTSTEFENFCTEQGIIHEVTAPYTPQHNGLAERRNRSILNMARSMVKQKQ 619

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLE 428
           LP   W EAV+TA Y LN CPT++L +KVP E
Sbjct: 620 LPKRFWAEAVSTAVYLLNRCPTKRLNEKVPEE 651



 Score = 69.3 bits (168), Expect(2) = 6e-43
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S GGN+YF+TFVDEF+RM W+Y+ IK KSD  + FKKFK   E QSG  +K+
Sbjct: 511 STGGNKYFITFVDEFSRMTWLYH-IKAKSDAFDVFKKFKALVEKQSGKSIKV 561


>gb|PNX98468.1| putative copia-type polyprotein, partial [Trifolium pratense]
          Length = 1267

 Score =  132 bits (331), Expect(2) = 2e-42
 Identities = 63/97 (64%), Positives = 74/97 (76%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S EF KFCE+ GI HE+TAPYTPQHNGVAER NR IM+MAR MLK  +
Sbjct: 586 KKLRTDGGGEYTSHEFAKFCEDEGIVHEITAPYTPQHNGVAERKNRSIMNMARSMLKAKN 645

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLEFPCWT 443
           +P+  WGEA +TA Y +N  PT+KL++K P E   WT
Sbjct: 646 MPHKFWGEATSTAVYIINRSPTKKLQEKTPHE--AWT 680



 Score = 68.2 bits (165), Expect(2) = 2e-42
 Identities = 29/51 (56%), Positives = 39/51 (76%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLK 154
           S+GGN YF+TF+D++TR +W+ YLI+ KSDV  +FKKFK   E  SGC +K
Sbjct: 537 SIGGNNYFLTFIDDYTRHVWL-YLIEKKSDVFTKFKKFKTLVEKHSGCSVK 586


>dbj|GAU44417.1| hypothetical protein TSUD_100640 [Trifolium subterraneum]
          Length = 1318

 Score =  131 bits (329), Expect(2) = 3e-42
 Identities = 63/97 (64%), Positives = 74/97 (76%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S EF KFCE+ GI HE+TAPYTPQHNGVAER NR IM+MAR MLK  +
Sbjct: 586 KKLRTDGGGEYTSLEFAKFCEDEGIVHEITAPYTPQHNGVAERKNRSIMNMARSMLKGKN 645

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLEFPCWT 443
           +P+  WGEA +TA + +N  PT+KLK+K P E   WT
Sbjct: 646 MPHRFWGEATSTAVHIINRSPTKKLKNKTPHE--AWT 680



 Score = 68.6 bits (166), Expect(2) = 3e-42
 Identities = 30/51 (58%), Positives = 40/51 (78%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLK 154
           S+GGN YF+TF+D++TR +W+ YLI+ KS+V  +FKKFK   E QSGC LK
Sbjct: 537 SIGGNNYFLTFIDDYTRHVWL-YLIEKKSEVFTKFKKFKSLVEKQSGCDLK 586


>dbj|GAU39052.1| hypothetical protein TSUD_396570 [Trifolium subterraneum]
          Length = 1309

 Score =  142 bits (358), Expect(2) = 3e-42
 Identities = 68/97 (70%), Positives = 74/97 (76%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEYNS EFK FCEE GI HEVTAPYTPQHNG+AER NR +++MARCMLK   
Sbjct: 584 KTLRTDGGGEYNSNEFKTFCEEKGITHEVTAPYTPQHNGLAERRNRTLLNMARCMLKGKG 643

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLEFPCWT 443
           LP  LWGEAV  A Y LN CPT+K+KD  P E   WT
Sbjct: 644 LPKNLWGEAVNAAAYVLNRCPTQKMKDNTPEEL--WT 678



 Score = 57.4 bits (137), Expect(2) = 3e-42
 Identities = 29/51 (56%), Positives = 36/51 (70%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLK 154
           ++GGNRYF+T VDEFTR +WI YL+K KS+  + FKKF   AE Q    LK
Sbjct: 535 TLGGNRYFMTCVDEFTRKVWI-YLLKEKSEAFSAFKKFCATAERQCENHLK 584


>dbj|GAU48263.1| hypothetical protein TSUD_405090 [Trifolium subterraneum]
          Length = 1292

 Score =  136 bits (343), Expect(2) = 3e-42
 Identities = 63/92 (68%), Positives = 71/92 (77%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S  F+ FC E+ IEHEV  PYTPQHN +AER N+ IMDMARCM+K  +
Sbjct: 579 KILRTDGGGEYTSKNFESFCVENDIEHEVITPYTPQHNDLAERRNKTIMDMARCMVKHKN 638

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLE 428
           LP + WGEAV TA Y LN CPT+KLKDKVP E
Sbjct: 639 LPKSFWGEAVATAVYVLNRCPTKKLKDKVPEE 670



 Score = 63.2 bits (152), Expect(2) = 3e-42
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+ GNRYF+TFVDEFT  +WI YLI+TK +    FKKFK   ENQS  ++KI
Sbjct: 530 SLVGNRYFITFVDEFTWKMWI-YLIQTKDEAFVVFKKFKALVENQSNRRIKI 580


>gb|PNX95963.1| retrotransposon-related protein, partial [Trifolium pratense]
          Length = 1290

 Score =  136 bits (342), Expect(2) = 3e-42
 Identities = 64/97 (65%), Positives = 73/97 (75%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEYNS EF+ +C + GI HEVTAPYTPQHNG+AER NR +++MARCMLK   
Sbjct: 554 KVLRTDGGGEYNSKEFQAYCTQRGIIHEVTAPYTPQHNGLAERRNRTLLNMARCMLKGKG 613

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLEFPCWT 443
           LP   WGEAV TA Y LN CPT++LKD  P E   WT
Sbjct: 614 LPKCYWGEAVNTAAYVLNRCPTKRLKDNTPEEL--WT 648



 Score = 63.5 bits (153), Expect(2) = 3e-42
 Identities = 31/52 (59%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           ++GG+RYF+TFVDEFTR +WI YL+K KS+V   FK F   AE QS  KLK+
Sbjct: 505 TLGGSRYFMTFVDEFTRKIWI-YLLKEKSEVFAMFKNFCALAERQSEHKLKV 555


>dbj|GAU18292.1| hypothetical protein TSUD_201800 [Trifolium subterraneum]
          Length = 1285

 Score =  130 bits (326), Expect(2) = 5e-42
 Identities = 62/97 (63%), Positives = 68/97 (70%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S +F K CE  GI HEV  PYTPQ NG AER NR IM+M RCMLK  H
Sbjct: 630 KLLRTDGGGEYVSHDFAKLCESEGIVHEVIPPYTPQQNGSAERRNRTIMNMVRCMLKGKH 689

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLEFPCWT 443
           LP  LWGEAV TA Y LN+CPT++L    P E  CW+
Sbjct: 690 LPKELWGEAVATATYILNLCPTKRLNGITPEE--CWS 724



 Score = 68.9 bits (167), Expect(2) = 5e-42
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+GGN+YFV+FVD+F+R +W  YLI  KSDVL+ FKKFK   E QSG KLK+
Sbjct: 581 SIGGNKYFVSFVDDFSRKIWT-YLINKKSDVLSVFKKFKSVVERQSGHKLKL 631


>dbj|GAU43423.1| hypothetical protein TSUD_334860 [Trifolium subterraneum]
          Length = 1102

 Score =  129 bits (325), Expect(2) = 5e-42
 Identities = 61/97 (62%), Positives = 68/97 (70%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S +F + CE  GI HEV  PYTPQHNG AER NR IM+M RCMLK  H
Sbjct: 505 KVLRTDGGGEYVSHDFAELCESEGIVHEVIPPYTPQHNGSAERRNRTIMNMVRCMLKGKH 564

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLEFPCWT 443
           LP  LWGE V TA Y LN+CPT++L    P E  CW+
Sbjct: 565 LPKELWGEVVATATYILNLCPTKRLNGITPEE--CWS 599



 Score = 69.3 bits (168), Expect(2) = 5e-42
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+GGN+YFV+FVD+F+R +W  YLI  KSDVL+ FKKFK   E QSG KLK+
Sbjct: 456 SIGGNKYFVSFVDDFSRKIWT-YLINKKSDVLSVFKKFKSVVERQSGHKLKV 506


>dbj|GAU51473.1| hypothetical protein TSUD_95880 [Trifolium subterraneum]
          Length = 1242

 Score =  131 bits (330), Expect(2) = 1e-41
 Identities = 62/97 (63%), Positives = 71/97 (73%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S EF KFCE+ GI H++TAPYTPQHNG+AER NR IM+MAR MLK   
Sbjct: 518 KKLRTDGGGEYTSNEFAKFCEQEGIIHDITAPYTPQHNGIAERKNRSIMNMARSMLKGKG 577

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLEFPCWT 443
           +PN  W EA  T+ Y +N CPT+KL DK P E   WT
Sbjct: 578 MPNRFWAEAAATSVYIINRCPTKKLLDKTPYE--AWT 612



 Score = 66.2 bits (160), Expect(2) = 1e-41
 Identities = 29/51 (56%), Positives = 40/51 (78%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLK 154
           S+GGN YF+TF+DEFTR +WI Y+I+ KS+V  +FKKFK+  E +S C +K
Sbjct: 469 SMGGNYYFLTFIDEFTRYVWI-YMIEKKSEVFTRFKKFKLQVERESECSIK 518


>gb|PNX93875.1| copia-type polyprotein [Trifolium pratense]
          Length = 1350

 Score =  128 bits (322), Expect(2) = 1e-41
 Identities = 61/92 (66%), Positives = 67/92 (72%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S EF KFC+  GI H+V  PYTPQ NG AER NR IM+M RCMLK  H
Sbjct: 596 KTLRTDGGGEYVSTEFAKFCDSEGIVHDVIPPYTPQQNGSAERRNRTIMNMVRCMLKGKH 655

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLE 428
           LP  LWGEAV+TA YTLN CPT++L    P E
Sbjct: 656 LPKELWGEAVSTATYTLNRCPTKRLDGITPEE 687



 Score = 68.9 bits (167), Expect(2) = 1e-41
 Identities = 32/51 (62%), Positives = 41/51 (80%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLK 154
           S+GGN+YFV+F+D+F+R +W  YLI  KSDVL+ FKKFK+  E QSG KLK
Sbjct: 547 SIGGNKYFVSFIDDFSRKMWT-YLISKKSDVLDVFKKFKLTVERQSGYKLK 596


>dbj|GAU14094.1| hypothetical protein TSUD_169190 [Trifolium subterraneum]
          Length = 1258

 Score =  127 bits (320), Expect(2) = 2e-41
 Identities = 61/97 (62%), Positives = 68/97 (70%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S +F + CE  GI HEV  PYTPQ NG AER NR IM+M RCMLK  H
Sbjct: 509 KVLRTDGGGEYVSHDFAELCESEGIVHEVIPPYTPQQNGSAERRNRTIMNMVRCMLKGKH 568

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLEFPCWT 443
           LP  LWGEAV TA Y LN+CPT++L    P E  CW+
Sbjct: 569 LPKELWGEAVATATYILNMCPTKRLNGITPEE--CWS 603



 Score = 69.3 bits (168), Expect(2) = 2e-41
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+GGN+YFV+FVD+F+R +W  YLI  KSDVL+ FKKFK   E QSG KLK+
Sbjct: 460 SIGGNKYFVSFVDDFSRKIWT-YLINKKSDVLSVFKKFKSVVERQSGHKLKV 510


>dbj|GAU46598.1| hypothetical protein TSUD_99480 [Trifolium subterraneum]
          Length = 1244

 Score =  126 bits (317), Expect(2) = 4e-41
 Identities = 60/97 (61%), Positives = 67/97 (69%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S +F + CE  GI HEV  PYTPQ NG  ER NR IM+M RCMLK  H
Sbjct: 504 KVLRTDGGGEYVSHDFAELCESEGIVHEVIPPYTPQQNGSVERRNRTIMNMVRCMLKGKH 563

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLEFPCWT 443
           LP  LWGEAV TA Y LN+CPT++L    P E  CW+
Sbjct: 564 LPKELWGEAVATATYILNLCPTKRLNGITPEE--CWS 598



 Score = 69.3 bits (168), Expect(2) = 4e-41
 Identities = 33/52 (63%), Positives = 41/52 (78%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+GGN+YFV+FVD+F+R +W  YLI  KSDVL+ FKKFK   E QSG KLK+
Sbjct: 455 SIGGNKYFVSFVDDFSRKIWT-YLINKKSDVLSVFKKFKSVVERQSGHKLKV 505


>dbj|GAU33377.1| hypothetical protein TSUD_365030 [Trifolium subterraneum]
          Length = 1208

 Score =  130 bits (328), Expect(2) = 6e-41
 Identities = 62/92 (67%), Positives = 72/92 (78%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S EF+ +C++ GI HEVT PYTPQHNG+AER NR I+DMAR M+KQ  
Sbjct: 487 KVLRTDGGGEYTSKEFENYCKDQGIIHEVTTPYTPQHNGLAERRNRSILDMARSMVKQKG 546

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLE 428
           LP+  WGEAV+TA Y LN  PT+KL DKVP E
Sbjct: 547 LPHRFWGEAVSTAVYILNRSPTKKLIDKVPEE 578



 Score = 64.7 bits (156), Expect(2) = 6e-41
 Identities = 28/52 (53%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S GGN+YF+TFVDE++RM+W+Y+ IK KS+V   FK+FK   E QS   +K+
Sbjct: 438 STGGNKYFITFVDEYSRMIWMYH-IKAKSEVFEVFKRFKTLVEKQSDKSIKV 488


>gb|KYP68287.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1340

 Score =  132 bits (332), Expect(2) = 7e-41
 Identities = 60/92 (65%), Positives = 72/92 (78%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGE+ S EF+ FC+EHGI HEVTAPYTPQHNG+AER NR I++M R MLK+ +
Sbjct: 584 KILRTDGGGEFTSGEFEGFCKEHGIVHEVTAPYTPQHNGIAERRNRTILNMVRSMLKEKN 643

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLE 428
           LP++ WGEA  TA Y LN CPT++L   VP E
Sbjct: 644 LPHSFWGEAAMTAVYVLNRCPTKRLGSMVPEE 675



 Score = 62.8 bits (151), Expect(2) = 7e-41
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+GGNRYFV+FVD+ +R  W+ YLIK KSDV + FK FK   E QSG  +KI
Sbjct: 535 SLGGNRYFVSFVDDLSRKAWL-YLIKAKSDVFSIFKDFKALVEKQSGKCIKI 585


>gb|KYP31826.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1340

 Score =  132 bits (332), Expect(2) = 7e-41
 Identities = 60/92 (65%), Positives = 72/92 (78%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGE+ S EF+ FC+EHGI HEVTAPYTPQHNG+AER NR I++M R MLK+ +
Sbjct: 584 KILRTDGGGEFTSGEFEGFCKEHGIVHEVTAPYTPQHNGIAERRNRTILNMVRSMLKEKN 643

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLE 428
           LP++ WGEA  TA Y LN CPT++L   VP E
Sbjct: 644 LPHSFWGEAAMTAVYVLNRCPTKRLGSMVPEE 675



 Score = 62.8 bits (151), Expect(2) = 7e-41
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+GGNRYFV+FVD+ +R  W+ YLIK KSDV + FK FK   E QSG  +KI
Sbjct: 535 SLGGNRYFVSFVDDLSRKAWL-YLIKAKSDVFSIFKDFKALVEKQSGKCIKI 585


>gb|KYP61818.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
 gb|KYP63036.1| Retrovirus-related Pol polyprotein from transposon TNT 1-94
           [Cajanus cajan]
          Length = 1314

 Score =  132 bits (332), Expect(2) = 7e-41
 Identities = 60/92 (65%), Positives = 72/92 (78%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGE+ S EF+ FC+EHGI HEVTAPYTPQHNG+AER NR I++M R MLK+ +
Sbjct: 558 KILRTDGGGEFTSGEFEGFCKEHGIVHEVTAPYTPQHNGIAERRNRTILNMVRSMLKEKN 617

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLE 428
           LP++ WGEA  TA Y LN CPT++L   VP E
Sbjct: 618 LPHSFWGEAAMTAVYVLNRCPTKRLGSMVPEE 649



 Score = 62.8 bits (151), Expect(2) = 7e-41
 Identities = 31/52 (59%), Positives = 38/52 (73%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+GGNRYFV+FVD+ +R  W+ YLIK KSDV + FK FK   E QSG  +KI
Sbjct: 509 SLGGNRYFVSFVDDLSRKAWL-YLIKAKSDVFSIFKDFKALVEKQSGKCIKI 559


>dbj|GAU48356.1| hypothetical protein TSUD_282590 [Trifolium subterraneum]
          Length = 1300

 Score =  129 bits (323), Expect(2) = 7e-41
 Identities = 61/90 (67%), Positives = 68/90 (75%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LR+DGGGEY S EF+ FC    I HE+TAPYTPQHNG+ ER NR IMDM RCMLK+  
Sbjct: 572 KILRSDGGGEYTSHEFRNFCATQDISHEITAPYTPQHNGLCERRNRTIMDMTRCMLKEKG 631

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVP 422
           LPN  WGEAVTTA Y LN  PT++L DKVP
Sbjct: 632 LPNEFWGEAVTTACYVLNKSPTKRL-DKVP 660



 Score = 66.2 bits (160), Expect(2) = 7e-41
 Identities = 32/52 (61%), Positives = 41/52 (78%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S+GGNRYFV+FVDE++RM+W+ YLIKT+ +VL  FKKFK   E Q+   LKI
Sbjct: 523 SLGGNRYFVSFVDEYSRMMWL-YLIKTQDEVLIVFKKFKALVEKQAERSLKI 573


>dbj|GAU43786.1| hypothetical protein TSUD_378110 [Trifolium subterraneum]
          Length = 1166

 Score =  132 bits (331), Expect(2) = 7e-41
 Identities = 62/92 (67%), Positives = 73/92 (79%)
 Frame = +3

Query: 153 KFLRTDGGGEYNSAEFKKFCEEHGIEHEVTAPYTPQHNGVAERINRMIMDMARCMLKQMH 332
           K LRTDGGGEY S EF+ +C++ GI HE+TAPYTPQHNG+AER NR I+DMAR M+KQ  
Sbjct: 455 KVLRTDGGGEYTSKEFENYCKDQGIIHEITAPYTPQHNGLAERRNRSILDMARSMVKQKG 514

Query: 333 LPNTLWGEAVTTANYTLNICPTRKLKDKVPLE 428
           LP+  WGEAV+TA Y LN  PT+KL DKVP E
Sbjct: 515 LPHRFWGEAVSTAVYILNRSPTKKLIDKVPEE 546



 Score = 63.2 bits (152), Expect(2) = 7e-41
 Identities = 27/52 (51%), Positives = 39/52 (75%)
 Frame = +2

Query: 2   SVGGNRYFVTFVDEFTRMLWIYYLIKTKSDVLNQFKKFKVYAENQSGCKLKI 157
           S GGN+YF+TFVDE++RM+W+Y+ IK KS+    FK+FK   E QS  ++K+
Sbjct: 406 STGGNKYFITFVDEYSRMIWLYH-IKAKSEAFEVFKRFKKLVEKQSDKQIKV 456