BLASTX nr result

ID: Astragalus23_contig00028550 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00028550
         (952 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607495.2| transmembrane protein, putative [Medicago tr...    66   4e-09
ref|XP_003590171.1| transmembrane protein, putative [Medicago tr...    59   1e-06

>ref|XP_003607495.2| transmembrane protein, putative [Medicago truncatula]
 gb|AES89692.2| transmembrane protein, putative [Medicago truncatula]
          Length = 202

 Score = 66.2 bits (160), Expect = 4e-09
 Identities = 39/93 (41%), Positives = 50/93 (53%)
 Frame = +2

Query: 668 VVSLDHRETTHSRTAHISAKEMICNWIDSKTVDSPSLLAIYHMRKMFGWLIGLVVSSVVK 847
           V +L+  ET +SRT     KEMICNWI+ KT+DS    AI HM K   WL G      V 
Sbjct: 91  VDTLNKFETIYSRTVLAEVKEMICNWINLKTLDSLFNFAIDHMWKNLSWLFGSKDGKGVA 150

Query: 848 SMWFVLYMCIEARTQYYLIASSKYNLWMGSVPT 946
           S    LY+C   +    L+    +++WMG VPT
Sbjct: 151 S----LYLCYVYQILVDLVFMFNFSVWMGYVPT 179


>ref|XP_003590171.1| transmembrane protein, putative [Medicago truncatula]
 gb|AES60422.1| transmembrane protein, putative [Medicago truncatula]
          Length = 209

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 35/89 (39%), Positives = 44/89 (49%)
 Frame = +2

Query: 557 CWLFWIGFLHPNSSGTGTRVNTSNLFYPFYRQAAIVIVVSLDHRETTHSRTAHISAKEMI 736
           CW FW   +         +V  +NL+    +Q     VVSL + ETT+SR      KEMI
Sbjct: 121 CWTFWTRVMCAY-----LKVAANNLYLFSTKQMDSKFVVSLTNFETTYSRYVLAKVKEMI 175

Query: 737 CNWIDSKTVDSPSLLAIYHMRKMFGWLIG 823
            NWID KTVD        H+RK   W+IG
Sbjct: 176 LNWIDKKTVDLLFSFVNDHLRKKLVWVIG 204


Top