BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00013758
         (2774 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX98514.1| Ty3/gypsy retrotransposon protein, partial [Trifo...  1110   0.0  
gb|PNY17453.1| Ty3/gypsy retrotransposon protein [Trifolium prat...  1103   0.0  
dbj|GAU11620.1| hypothetical protein TSUD_346120 [Trifolium subt...  1100   0.0  
gb|PNX96484.1| Ty3/gypsy retrotransposon protein [Trifolium prat...  1088   0.0  
gb|PNX73110.1| Ty3/gypsy retrotransposon protein, partial [Trifo...  1083   0.0  
dbj|GAU25204.1| hypothetical protein TSUD_151040 [Trifolium subt...  1080   0.0  
gb|AAO23078.1| polyprotein [Glycine max]                             1076   0.0  
gb|PNX92431.1| Ty3/gypsy retrotransposon protein, partial [Trifo...  1075   0.0  
dbj|GAU27453.1| hypothetical protein TSUD_161390 [Trifolium subt...  1073   0.0  
gb|PNY16560.1| Ty3/gypsy retrotransposon protein [Trifolium prat...  1053   0.0  
dbj|GAU44596.1| hypothetical protein TSUD_187860 [Trifolium subt...  1034   0.0  
dbj|GAU12540.1| hypothetical protein TSUD_182540 [Trifolium subt...  1033   0.0  
gb|PNX98300.1| Ty3/gypsy retrotransposon protein, partial [Trifo...  1021   0.0  
dbj|GAU19157.1| hypothetical protein TSUD_79800 [Trifolium subte...  1013   0.0  
dbj|GAU29525.1| hypothetical protein TSUD_115470 [Trifolium subt...  1009   0.0  
dbj|GAU23504.1| hypothetical protein TSUD_39830 [Trifolium subte...   987   0.0  
gb|PNX92398.1| Ty3/gypsy retrotransposon protein [Trifolium prat...   979   0.0  
dbj|GAU35592.1| hypothetical protein TSUD_295280 [Trifolium subt...   973   0.0  
gb|KYP39589.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]   973   0.0  
gb|PNY14541.1| hypothetical protein L195_g011223 [Trifolium prat...   947   0.0  

>gb|PNX98514.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 1240

 Score = 1110 bits (2870), Expect = 0.0
 Identities = 533/803 (66%), Positives = 658/803 (81%), Gaps = 2/803 (0%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ VL K+VLVFFDDIL+YS SW +HL HL+AVL+ LQ + 
Sbjct: 424  MPFGLTNAPATFQSLMNHIFQHVLRKYVLVFFDDILIYSSSWQDHLTHLDAVLKVLQDNS 483

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            LF+KLSKCSFG  E+EYLGH++          KVQAVLNW TPTN+KQLRGFL LTGYYR
Sbjct: 484  LFVKLSKCSFGVSEIEYLGHMVTGQGVSMDRDKVQAVLNWSTPTNVKQLRGFLGLTGYYR 543

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIKSYAK+A  LTDL++K+++ WN++  +AFQQLKEA+TSAPVLALPNF +PFILE DA
Sbjct: 544  RFIKSYAKIAAPLTDLLKKESYRWNDQADIAFQQLKEAVTSAPVLALPNFHKPFILETDA 603

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVLHQ  HPIAYFSKKL PR QKKSAYFRE+LAI EA+AKFRHYLLGH+F+I T
Sbjct: 604  SGVGIGAVLHQDNHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLGHRFIIRT 663

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLRSL+DQSLQTPEQ EWLHKFLGYDF IEYKPGKEN+AAD+LSR+  +  S  Q  
Sbjct: 664  DQKSLRSLMDQSLQTPEQQEWLHKFLGYDFVIEYKPGKENLAADALSRLMTLAWSEPQYN 723

Query: 1873 FLKEFKEICSQDTWIQDMVKKC--GNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAIL 1700
            F ++ KE   QD  + ++++KC  G  P    +YTVR+G+LYWK R+V+P    +IQ IL
Sbjct: 724  FTQQVKEAIQQDDNLLEIIQKCLQGLAPT---NYTVREGILYWKHRMVIPPKAALIQQIL 780

Query: 1699 KEFHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQP 1520
            +EFH+SPIGGHAG+TRT+A I +QF+ ++MK+DI  ++  C +CQQAK+ +TLPAGLLQP
Sbjct: 781  EEFHTSPIGGHAGMTRTLARIKSQFYWSAMKKDIFDYVQNCLVCQQAKTTNTLPAGLLQP 840

Query: 1519 LPIPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNH 1340
            LPIP+Q+WED+AM+FI GLP SFG+TTI+VVVD+L+KY HFIA+K+D+TSK VAE FM++
Sbjct: 841  LPIPSQVWEDIAMDFITGLPLSFGYTTIMVVVDRLTKYAHFIAMKTDYTSKSVAEAFMHN 900

Query: 1339 IVKLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYL 1160
            +VKLHGMPKSIVSDRDKVFTS FW+HLF+LQGTTL M++AYHPQSDGQ+E L+K LE+YL
Sbjct: 901  VVKLHGMPKSIVSDRDKVFTSTFWQHLFKLQGTTLAMTSAYHPQSDGQTEVLNKGLELYL 960

Query: 1159 RCFTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELR 980
            RCF+F NPK W+K L+W+E+WYNT+F TSIGMTPFKA+YGRDPP L RY+ Q++DP  L+
Sbjct: 961  RCFSFNNPKSWFKMLSWSEFWYNTAFQTSIGMTPFKALYGRDPPYLTRYVAQASDPPTLQ 1020

Query: 979  QQLTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRN 800
            ++L +RD IL+QLK NL  AQ+ MK QADK RSD+ L+IGDLVLVKLQPYRQHSVALR+N
Sbjct: 1021 EELMERDKILQQLKDNLIRAQQYMKKQADKHRSDISLKIGDLVLVKLQPYRQHSVALRKN 1080

Query: 799  QKLGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVT 620
            QKLG+RYFGPF ++ +VG VAYKLKLP+  KIHPVFH+SQLKPFKG   EQY PLPLT+T
Sbjct: 1081 QKLGLRYFGPFEIIARVGEVAYKLKLPDDAKIHPVFHVSQLKPFKGVADEQYLPLPLTMT 1140

Query: 619  EHDPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKV 440
            +  P +QP  +LQ RT+ +G++ I Q L++W+  P  +ATWE +T ++  FP+ NLEDKV
Sbjct: 1141 DIGPSIQPIDVLQVRTVIRGSQQIHQVLIQWDQYPAAQATWEDITTIQEKFPSLNLEDKV 1200

Query: 439  VFNGDGDVMGKIGNSNIVEESNA 371
             FNGDG VM     + I E+ +A
Sbjct: 1201 AFNGDGIVMKPNITTTIEEDDSA 1223


>gb|PNY17453.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1535

 Score = 1103 bits (2854), Expect = 0.0
 Identities = 539/840 (64%), Positives = 666/840 (79%), Gaps = 17/840 (2%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ  L K+VLVFFDDIL+YS +W +HLQHL+ VL+ LQ +I
Sbjct: 696  MPFGLTNAPATFQSLMNHIFQHALRKYVLVFFDDILIYSNTWQDHLQHLDVVLRVLQENI 755

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            L++KLSKC+FG LE+EYLGH++          KVQAVLNWPTP N+KQLRGFL LTGYYR
Sbjct: 756  LYVKLSKCNFGVLEIEYLGHVVTGQGVSMDKDKVQAVLNWPTPMNVKQLRGFLGLTGYYR 815

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIKSYAK+A  LTDL++K+ + WN +   AF+QLK A+T+APVLALPNFK PFILE DA
Sbjct: 816  RFIKSYAKIASPLTDLLKKEAYQWNAQAEEAFKQLKNAITTAPVLALPNFKLPFILETDA 875

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVLHQQ HPIAYFSKKL PR QKKSAYFRE+LAI EA+AKFRHYLLGHKF+I T
Sbjct: 876  SGVGIGAVLHQQGHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLGHKFIIRT 935

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLRSL++QSLQTP+Q EWLHKFLGYDFTIEYKPGKEN+AAD+LSR+  +  S  + +
Sbjct: 936  DQKSLRSLMEQSLQTPDQQEWLHKFLGYDFTIEYKPGKENMAADALSRIMTLSWSEPKCQ 995

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
            F+++ +     D  +++++ KC N   A   Y++RDGLLYWKQRLV+P++N+++  +L E
Sbjct: 996  FIEQIRVALQNDNQMREILMKC-NAGKAPVQYSMRDGLLYWKQRLVIPKDNDLLYKVLFE 1054

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            FH+SPIGGHAG+TRTMA I +QF+   MKQDI  ++ +C +CQQAK+ +T PAGLLQPLP
Sbjct: 1055 FHTSPIGGHAGITRTMARIKSQFYWPDMKQDIIDYVQKCMVCQQAKTTNTSPAGLLQPLP 1114

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP+Q+WED+AM+FI GLP S G+TTI+VVVD+L+KY HFI +KSD+TSK VAE FM++IV
Sbjct: 1115 IPSQVWEDIAMDFITGLPLSSGYTTIMVVVDRLTKYAHFIPMKSDYTSKSVAESFMHNIV 1174

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHGMPKSIVSDRDKVFTS FW+ LF+LQGT+L MS+AYHPQSDGQ+E L+K LE++LRC
Sbjct: 1175 KLHGMPKSIVSDRDKVFTSAFWQQLFKLQGTSLAMSSAYHPQSDGQTEVLNKALELFLRC 1234

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            FTF NPK W K L+WAEYWYNT+F TSIGMTPFKA+YGRDPP L +Y  Q TDP  L+++
Sbjct: 1235 FTFHNPKSWSKVLSWAEYWYNTAFQTSIGMTPFKALYGRDPPYLTKYEAQVTDPPALQEE 1294

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L +RD IL+QLK NL  AQ+ MK QADK R D+  Q+GDLVLVKLQPYRQ SVALR+NQK
Sbjct: 1295 LMERDKILQQLKSNLDRAQQYMKKQADKHRKDVTFQVGDLVLVKLQPYRQQSVALRKNQK 1354

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LGMRYFGPF ++  +GAVAYKLKLP+  KIHPVFH+SQLKPFKG   +QY PLPLT+TE 
Sbjct: 1355 LGMRYFGPFEIIACIGAVAYKLKLPDNAKIHPVFHVSQLKPFKGAASDQYLPLPLTMTET 1414

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             P+MQP  +LQ RT+ +GT+ + Q LV+W+     +ATWE   +L++ FPT NLEDKVVF
Sbjct: 1415 GPIMQPIAVLQARTIMRGTQRVHQILVQWDTNAEAEATWEDFDDLQLKFPTLNLEDKVVF 1474

Query: 433  NGDGDVMGKIGNSNIVEE---------------SNAVGANL--PRRGERKKITNSQLRDF 305
            NG+G VM +   +N++EE               S + G  L  PRRG+R K  +S  R++
Sbjct: 1475 NGEGIVM-RPNTTNLLEENVSAKFHKGPQDMHDSVSGGKELSGPRRGQRAKKPHSMWREY 1533


>dbj|GAU11620.1| hypothetical protein TSUD_346120 [Trifolium subterraneum]
          Length = 1479

 Score = 1100 bits (2845), Expect = 0.0
 Identities = 533/779 (68%), Positives = 638/779 (81%), Gaps = 2/779 (0%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ  L K+VLVFFDDIL+YS SWH+HLQHL  VL+ LQ + 
Sbjct: 695  MPFGLTNAPATFQSLMNHIFQQALRKYVLVFFDDILIYSSSWHDHLQHLNKVLEMLQANT 754

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            LF+KLSKCSFG  E++YLGHI+         SKVQAVL+WPTP NIKQLRGFL LTGYYR
Sbjct: 755  LFVKLSKCSFGVNEIDYLGHIVTGQGVTMEKSKVQAVLDWPTPGNIKQLRGFLGLTGYYR 814

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIKSYAK+A  LTDL++K+ + WNE+   AFQQLK A+TSAPVLALPNF EPFILE DA
Sbjct: 815  RFIKSYAKIAAPLTDLLKKEAYKWNEQAEAAFQQLKIAVTSAPVLALPNFNEPFILETDA 874

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVLHQ  HPIAYFSKKL PR QKKSAYFRE+LAI EA+AKFRHYLLGHKF+I T
Sbjct: 875  SGIGIGAVLHQNNHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLGHKFIIRT 934

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLRSL++QSLQTP+Q EWLHKFLGYDFTIEYKPGK+N+AAD+LSR+  M  S  Q  
Sbjct: 935  DQKSLRSLMEQSLQTPDQQEWLHKFLGYDFTIEYKPGKDNLAADALSRMMCMGWSEPQCS 994

Query: 1873 FLKEFKEICSQDTWIQDMVKKC--GNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAIL 1700
            ++++ K    QDT + +++++C  G T     HYTVRDGLLYWK R+V+P ++ ++Q +L
Sbjct: 995  WIQQIKTALQQDTTLMEIIQQCEQGQTNT---HYTVRDGLLYWKHRIVIPVDDALLQQVL 1051

Query: 1699 KEFHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQP 1520
            KEFHSSPIGGHAG+TRT+A I AQF+  +MKQDI Q++  C +CQQ K+ +TLPAGLLQP
Sbjct: 1052 KEFHSSPIGGHAGMTRTLARIQAQFYWPNMKQDIVQYVQNCLVCQQTKTTNTLPAGLLQP 1111

Query: 1519 LPIPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNH 1340
            LPIP+QIWEDLAM+FI GLP S G+T ILVVVD+L+KY HFI +K+D++SK VAEVFM +
Sbjct: 1112 LPIPSQIWEDLAMDFITGLPSSHGYTVILVVVDRLTKYAHFIPMKTDYSSKSVAEVFMQN 1171

Query: 1339 IVKLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYL 1160
            +VKLHG+PKSIVSDRDKVFTS FW+ LF+LQGTTL MS+AYHPQSDGQSE L+K LE+YL
Sbjct: 1172 VVKLHGLPKSIVSDRDKVFTSAFWQQLFKLQGTTLAMSSAYHPQSDGQSEVLNKTLELYL 1231

Query: 1159 RCFTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELR 980
            RCF+F NPK W K L+W+E+WYNT+F TSIGMTPFKAVYGRDPP L RY+ Q +DP  LR
Sbjct: 1232 RCFSFNNPKAWSKMLSWSEFWYNTAFQTSIGMTPFKAVYGRDPPYLNRYVAQDSDPPTLR 1291

Query: 979  QQLTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRN 800
             +L +RD IL+QLK NL  AQ+ MK QADK R ++Q QIGDLVLVKLQPYRQHSVALR+N
Sbjct: 1292 AELMERDTILQQLKNNLLKAQQYMKKQADKHRIELQFQIGDLVLVKLQPYRQHSVALRKN 1351

Query: 799  QKLGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVT 620
            QKLG+RYFGPF ++ KVGAVAYKLKLP+  KIHPVFH+SQLKPFKG   EQYFPLPLT+T
Sbjct: 1352 QKLGLRYFGPFEIIAKVGAVAYKLKLPDYAKIHPVFHVSQLKPFKGFTNEQYFPLPLTMT 1411

Query: 619  EHDPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDK 443
            E  P+ QP  +LQ RT+ +GT+ + Q L++W+  PRE+A+WE   ++   FP FNLEDK
Sbjct: 1412 EIGPLSQPIDVLQVRTIIKGTKKVHQVLIQWDQYPREEASWEDADDVLNKFPAFNLEDK 1470


>gb|PNX96484.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1258

 Score = 1088 bits (2815), Expect = 0.0
 Identities = 525/835 (62%), Positives = 659/835 (78%), Gaps = 12/835 (1%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ VL K+VLVFFDDILVYS +WHEHL+HL AVLQ LQ + 
Sbjct: 423  MPFGLTNAPATFQSLMNTIFQTVLRKYVLVFFDDILVYSKTWHEHLKHLAAVLQVLQDNQ 482

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            L++KLSKCSFG LE+EYLGH++         +K+QAV++WP P NIKQLRGFL LTGYYR
Sbjct: 483  LYVKLSKCSFGVLEIEYLGHVVSGEGVSMDKTKIQAVVDWPPPKNIKQLRGFLGLTGYYR 542

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFI+SYAK+A  LTDL++K+ + W  +   AFQ+LK A+T+APVLALP+F +PF+LE DA
Sbjct: 543  RFIQSYAKIASPLTDLLKKEAYTWTSQEESAFQKLKHAITTAPVLALPDFTKPFVLETDA 602

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVLHQ+ HPIAYFSKKL PR Q+KSAYFRE+LAI EA+AKFRHYLLGHKF+I T
Sbjct: 603  SGIGIGAVLHQEGHPIAYFSKKLVPRNQRKSAYFREMLAIAEAIAKFRHYLLGHKFIIRT 662

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLR+L++Q+LQTP+Q EWLH+FLGYDF+IEYKPGKEN+AAD+LSRV  M  S  Q +
Sbjct: 663  DQKSLRNLMEQALQTPDQQEWLHRFLGYDFSIEYKPGKENVAADALSRVMTMAWSEPQYK 722

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
             L + +    QD+ +  +++KC    A   HYTV+D LL+WK R+V+P+N+ +I+ +L E
Sbjct: 723  LLHQIRAALKQDSTLLGIMQKCVQNNATNSHYTVKDELLFWKHRIVIPKNSELIKQVLYE 782

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
             H+SPIGGHAG+ RT+A + +QF+   MK DI  ++  C ICQ+AK+ +TLPAGLLQPLP
Sbjct: 783  LHTSPIGGHAGMARTLARVKSQFYWPDMKTDIADYVQNCAICQKAKTTNTLPAGLLQPLP 842

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP+Q+WED+AM+FI GLP S G+TTILVV+D+L+KY HFI LK+D++SK VAE  M++IV
Sbjct: 843  IPSQVWEDVAMDFITGLPSSQGYTTILVVIDRLTKYAHFIPLKTDYSSKIVAEAVMDNIV 902

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHGMPKSIVSDRDKVFTS+FW+ LF+LQGTTL MS+AYHPQSDGQSE L+K LE++LRC
Sbjct: 903  KLHGMPKSIVSDRDKVFTSSFWQQLFKLQGTTLAMSSAYHPQSDGQSEVLNKTLELFLRC 962

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            FTF NPK W KAL+W+E+WYNT+F TSIGMTPFKA+YGRDPP+L+RY  Q+ DP  L+++
Sbjct: 963  FTFDNPKSWCKALSWSEFWYNTAFQTSIGMTPFKALYGRDPPALIRYETQANDPPTLQEK 1022

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L +RD I++QLK NL  AQ+ MK QADK R D++LQ+GDLVLVKLQPYRQ SVALR+NQK
Sbjct: 1023 LMERDRIIQQLKLNLEKAQQYMKKQADKHRVDVKLQVGDLVLVKLQPYRQQSVALRKNQK 1082

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LGMRYFGPF V+ KVG VAYKLKLPE  KIHPVFH+SQLKPFKG+N EQY PLPL++T+ 
Sbjct: 1083 LGMRYFGPFEVIAKVGEVAYKLKLPEHAKIHPVFHVSQLKPFKGDNQEQYMPLPLSMTDT 1142

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             PM+QP  +L  RT+ +G + I Q L++W+     +ATWE V  L+  FP FNLEDKV F
Sbjct: 1143 GPMIQPVSVLATRTIIRGAQRIQQVLIQWDQYSTAEATWEDVDALQSKFPAFNLEDKVAF 1202

Query: 433  NGDGDVMGKIGNSNIVEESNAVGANL------------PRRGERKKITNSQLRDF 305
             GDG VM  +   NI++E  +    L            PRRG+R + T+ +L  +
Sbjct: 1203 IGDGIVMSPM-EENILQEGESAKEGLNDMHERNSVMMGPRRGKRVRKTSKRLEGY 1256


>gb|PNX73110.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 937

 Score = 1083 bits (2802), Expect = 0.0
 Identities = 516/783 (65%), Positives = 639/783 (81%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ  L K+VLVFFDDIL+YS +W +HL+HL+AVL+ LQ + 
Sbjct: 156  MPFGLTNAPATFQSLMNHIFQHALRKYVLVFFDDILIYSRTWQDHLKHLDAVLKILQENT 215

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            LF+KLSKCSFG LE+EYLGH++          KVQAVLNWPTP N+KQLRGFL LTGYYR
Sbjct: 216  LFVKLSKCSFGVLEIEYLGHMVTGQGVSMDKDKVQAVLNWPTPKNVKQLRGFLGLTGYYR 275

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIKSYAK+A  LTDL++K+ + WN+   LAFQQLK A+T+APVLALPNF +PFILE DA
Sbjct: 276  RFIKSYAKIASPLTDLLKKEAYAWNDLAELAFQQLKSAVTTAPVLALPNFHQPFILETDA 335

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVLHQ+ HPIAYFSKKL PR QKKSAYFRE+LAI EA+AKFRHYLLGHKF+I T
Sbjct: 336  SGVGIGAVLHQEGHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLGHKFIIRT 395

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLRSL++QSLQTPEQ EWLHKFLGYDFTIEYKPGKEN+AAD+LSR+  +  S  Q +
Sbjct: 396  DQKSLRSLMEQSLQTPEQQEWLHKFLGYDFTIEYKPGKENMAADALSRLMTLAWSEPQCQ 455

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
            F+++ K     D  + +++ KC +  A    YT+R+GLLYWKQRLV+P+ N ++  +L E
Sbjct: 456  FIEQVKLALQNDNQMMEIMLKCASGKAPI-QYTMREGLLYWKQRLVIPKQNELLHKVLYE 514

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            FH+SPIGGHAG+TRTMA I +QF+   MK+DI +++  C +CQQAK+ +T PAGLLQPLP
Sbjct: 515  FHTSPIGGHAGITRTMARIKSQFYWPDMKKDILEYVQNCVVCQQAKTTNTSPAGLLQPLP 574

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP+Q+WED+AM+FI GLP S+G+TTI+VVVD+L+KY HFI +++D+TS+ VAE FM++IV
Sbjct: 575  IPSQVWEDIAMDFITGLPLSYGYTTIMVVVDRLTKYAHFIPMRTDYTSRSVAEAFMHNIV 634

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHGMPKSIVSDRDKVFTS FW+ LF+LQGT+L MS+AYHPQSDGQ+E L+K LE++LRC
Sbjct: 635  KLHGMPKSIVSDRDKVFTSAFWQQLFKLQGTSLAMSSAYHPQSDGQTEVLNKGLELFLRC 694

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            F+F NPK WYK L+WAEYWYNT+F TSIGMTPFKA+YGRDPP L +Y  Q TD   L+++
Sbjct: 695  FSFHNPKSWYKVLSWAEYWYNTAFQTSIGMTPFKALYGRDPPYLTKYEAQVTDSPALQEE 754

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L +RD IL+QLK NL  AQ+ MK QADK RS++ LQ+GDLVLVKLQPYRQ SV+LR+NQK
Sbjct: 755  LMERDKILQQLKINLERAQQYMKKQADKHRSEVNLQVGDLVLVKLQPYRQQSVSLRKNQK 814

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LGMRYFGPF ++ +VG VAYKLKLP+  KIHPVFH+SQLKPFKG   +QY PLPLT++E 
Sbjct: 815  LGMRYFGPFEIIARVGNVAYKLKLPDNAKIHPVFHVSQLKPFKGIAQDQYLPLPLTMSET 874

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             P++QP   L+ RT+ +G + + Q LV+W+ MP  +ATWE +  L+  FPT NLEDK+ F
Sbjct: 875  GPIIQPIAALEARTIMRGMQKVHQILVQWDQMPVTEATWEDLDVLQDKFPTLNLEDKIAF 934

Query: 433  NGD 425
            NG+
Sbjct: 935  NGE 937


>dbj|GAU25204.1| hypothetical protein TSUD_151040 [Trifolium subterraneum]
          Length = 1512

 Score = 1080 bits (2794), Expect = 0.0
 Identities = 514/787 (65%), Positives = 636/787 (80%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ VL K+VLVFFDDILVYS +W EHL+HL AVLQ LQ + 
Sbjct: 695  MPFGLTNAPATFQSLMNTIFQNVLRKYVLVFFDDILVYSKTWQEHLKHLAAVLQVLQDNE 754

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            LF+KLSKCSFG  E+EYLGH++          K+QAVL+WP P NIKQLRGFL LTGYYR
Sbjct: 755  LFVKLSKCSFGVSEIEYLGHVVNGQGVSMDKEKIQAVLDWPPPKNIKQLRGFLCLTGYYR 814

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFI+SYAK+A  LTDL++K+ ++W  +   AFQQLK A+TSAPVLALPNF + FILE DA
Sbjct: 815  RFIQSYAKIASPLTDLLKKEAYVWTTQAKAAFQQLKNAITSAPVLALPNFTKTFILETDA 874

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVLHQ+ HPIAYFSKKL PR QKKSAYFRE+LAI EA+AKFRHYLLGHKF+I T
Sbjct: 875  SGVGIGAVLHQEGHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLGHKFIIRT 934

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLR+L++Q+LQTP+Q EWLH+FLGYDF+IEYKPGK+N+ AD+LSRV  +  S  Q  
Sbjct: 935  DQKSLRNLMEQTLQTPDQQEWLHRFLGYDFSIEYKPGKDNVVADALSRVMTLAWSEPQFR 994

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
             L + K I  QD  +  +  +C        HYT++D LL+WKQR+V+P +  +IQ +L E
Sbjct: 995  LLHQIKAIQKQDPTLVKIRMECAQHSQPGSHYTIKDDLLFWKQRIVIPHDGALIQQVLYE 1054

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
             H+SP+GGHAG+TRT+A + AQF+ + MK+DI +++  C ICQ+AK+A+TLPAGLLQPLP
Sbjct: 1055 LHTSPLGGHAGITRTVARVKAQFYWSDMKKDIVEYVQNCEICQKAKTANTLPAGLLQPLP 1114

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP+Q+WED+AM+FI GLP S G+T ILVV+D+L+KY HFI LK+D+TSK VAE FM+HIV
Sbjct: 1115 IPSQVWEDVAMDFITGLPLSHGYTVILVVIDRLTKYAHFIPLKTDYTSKIVAEAFMHHIV 1174

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHGMPKSIVSDRDKVFTSNFW+ LF+LQGT+L MS+AYHPQSDGQSE L++ LE++LRC
Sbjct: 1175 KLHGMPKSIVSDRDKVFTSNFWQQLFKLQGTSLAMSSAYHPQSDGQSEVLNRTLELFLRC 1234

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            FTF NPK WYKAL+W+E+WYNT+F TSIGMTPFKA+YGRDPP+L+RY  Q+ DP  L+++
Sbjct: 1235 FTFNNPKAWYKALSWSEFWYNTAFQTSIGMTPFKALYGRDPPTLVRYEAQAGDPPALQEE 1294

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L  RD +L+QLK NL  AQ+ MK QADK R D++LQ+GDLVLVKLQPYRQ S+ALR+NQK
Sbjct: 1295 LMGRDKLLQQLKSNLERAQQYMKRQADKHRRDIKLQVGDLVLVKLQPYRQQSLALRKNQK 1354

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LGMRYFGPF ++ KVG VAYKLKLP+  KIHPVFH+SQLKPFKG + +Q  PLPLT+++ 
Sbjct: 1355 LGMRYFGPFEILAKVGEVAYKLKLPDHAKIHPVFHISQLKPFKGISQDQSLPLPLTMSDT 1414

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             P++QP  +L  RT+ +G + + Q L++W+  P  +ATWE VT L+  FP FNLEDKVVF
Sbjct: 1415 GPLIQPIAVLAARTILKGIQKVHQVLIQWDQYPEAEATWEEVTNLQSKFPYFNLEDKVVF 1474

Query: 433  NGDGDVM 413
             GDG VM
Sbjct: 1475 KGDGIVM 1481


>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score = 1076 bits (2783), Expect = 0.0
 Identities = 523/817 (64%), Positives = 643/817 (78%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQCLMN+IFQ  L KFVLVFFDDIL+YS SW +HL+HLE+VLQTL++H 
Sbjct: 719  MPFGLTNAPATFQCLMNKIFQFALRKFVLVFFDDILIYSASWKDHLKHLESVLQTLKQHQ 778

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            LF +LSKCSFG  EV+YLGH +         +KVQAVL+WPTP N+KQLRGFL LTGYYR
Sbjct: 779  LFARLSKCSFGDTEVDYLGHKVSGLGVSMENTKVQAVLDWPTPNNVKQLRGFLGLTGYYR 838

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIKSYA +A  LTDL++KD+F+WN     AF +LK+AMT APVL+LP+F +PFILE DA
Sbjct: 839  RFIKSYANIAGPLTDLLQKDSFLWNNEAEAAFVKLKKAMTEAPVLSLPDFSQPFILETDA 898

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG GVGAVL Q  HPIAYFSKKLAPRMQK+SAY RELLAITEAL+KFRHYLLG+KF+I T
Sbjct: 899  SGIGVGAVLGQNGHPIAYFSKKLAPRMQKQSAYTRELLAITEALSKFRHYLLGNKFIIRT 958

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQ+SL+SL+DQSLQTPEQ  WLHKFLGYDF IEYKPGK+N AAD+LSR+FM+  S     
Sbjct: 959  DQRSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYKPGKDNQAADALSRMFMLAWSEPHSI 1018

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
            FL+E +     D  ++ +++       A  HYTVR+GLLYWK R+V+P    ++  IL+E
Sbjct: 1019 FLEELRARLISDPHLKQLMETYKQGADA-SHYTVREGLLYWKDRVVIPAEEEIVNKILQE 1077

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            +HSSPIGGHAG+TRT+A + AQF+   M++D++ +I +C ICQQAKS +TLPAGLLQPLP
Sbjct: 1078 YHSSPIGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCLICQQAKSNNTLPAGLLQPLP 1137

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP Q+WED+AM+FI GLP SFG + I+VV+D+L+KY HFI LK+D+ SK VAE FM+HIV
Sbjct: 1138 IPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHIV 1197

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHG+P+SIVSDRD+VFTS FW+HLF+LQGTTL MS+AYHPQSDGQSE L+K LEMYLRC
Sbjct: 1198 KLHGIPRSIVSDRDRVFTSTFWQHLFKLQGTTLAMSSAYHPQSDGQSEVLNKCLEMYLRC 1257

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            FT+ +PKGW KAL WAE+WYNT++H S+GMTPF+A+YGR+PP+L R      DPAE+R+Q
Sbjct: 1258 FTYEHPKGWVKALPWAEFWYNTAYHMSLGMTPFRALYGREPPTLTRQACSIDDPAEVREQ 1317

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            LTDRD +L +LK NLT AQ+ MK QADKKR D+  QIGD VLVKLQPYRQHS  LR+NQK
Sbjct: 1318 LTDRDALLAKLKINLTRAQQVMKRQADKKRLDVSFQIGDEVLVKLQPYRQHSAVLRKNQK 1377

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            L MRYFGPF V+ K+G VAYKL+LP   +IHPVFH+SQLKPF G   + Y PLPLTVTE 
Sbjct: 1378 LSMRYFGPFKVLAKIGDVAYKLELPSAARIHPVFHVSQLKPFNGTAQDPYLPLPLTVTEM 1437

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             P+MQP KIL  R + +G   I Q LV+WEN  +++ATWE + ++K ++PTFNLEDKVVF
Sbjct: 1438 GPVMQPVKILASRIIIRGHNQIEQILVQWENGLQDEATWEDIEDIKASYPTFNLEDKVVF 1497

Query: 433  NGDGDVMGKIGNSNIVEESNAVGANLPRRGERKKITN 323
             G+G+V   +      E+ N    +   RG   K+ +
Sbjct: 1498 KGEGNVTNGMSRG---EKVNNTAESSSERGLHNKLAD 1531


>gb|PNX92431.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 1502

 Score = 1075 bits (2781), Expect = 0.0
 Identities = 516/803 (64%), Positives = 646/803 (80%), Gaps = 2/803 (0%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ  L K+VLVFFDDIL+YS +W EHL HL+ VL  LQ + 
Sbjct: 699  MPFGLTNAPATFQSLMNHIFQHALRKYVLVFFDDILIYSSNWQEHLHHLDTVLTVLQDNT 758

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            L++KLSKCSFG LE+EYLGH++          KVQAV+NWPTP+N+KQLRGFL LTGYYR
Sbjct: 759  LYVKLSKCSFGVLEIEYLGHVVTGQGVSMDKDKVQAVVNWPTPSNVKQLRGFLGLTGYYR 818

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIKSYAK+A  LTDL++K+ + W E+  +AF QLK A+T+APVL LPNFKEPFILE DA
Sbjct: 819  RFIKSYAKIASPLTDLLKKEAYQWTEQAEVAFHQLKNAITTAPVLILPNFKEPFILETDA 878

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVLHQQ HPIAYFSKKL PR QKKSAYFRE+LAI EA+AKFRHYLLGHKF+I T
Sbjct: 879  SGIGIGAVLHQQGHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLGHKFIIRT 938

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLR+L++QSLQTPEQ EWLHKFLGYDFTIEYKPGKEN+AAD+LSRV +M  S  + +
Sbjct: 939  DQKSLRNLMEQSLQTPEQQEWLHKFLGYDFTIEYKPGKENMAADALSRVMVMAWSEPKWQ 998

Query: 1873 FLKEFKEICSQDTWIQDMVKK--CGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAIL 1700
             L + +     D  ++++++    G  P     Y++R+GLLYWKQRLV+P+N++++Q +L
Sbjct: 999  LLDQVRRALENDNQLREVMQNYAIGKAPV---QYSMREGLLYWKQRLVIPKNDDLLQKLL 1055

Query: 1699 KEFHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQP 1520
             EFH+SPIGGHAG+TRT+A I AQF+   MK+DI +++ +C +CQQAK+ +T PAGLLQP
Sbjct: 1056 FEFHTSPIGGHAGITRTIARIKAQFYWPDMKKDIAEYVHKCVVCQQAKTTNTSPAGLLQP 1115

Query: 1519 LPIPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNH 1340
            LPIP+Q+WED+AM+FI GLP S+G+TTI+VVVD+L+K  HFI +K+D+TSK VAE FM++
Sbjct: 1116 LPIPSQVWEDIAMDFITGLPLSYGYTTIMVVVDRLTKSAHFIPMKTDYTSKTVAEAFMHN 1175

Query: 1339 IVKLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYL 1160
            IVKLHGMPKSIVSDRDKVFTS FW+HLF++QGT+L MS+AYHPQ+DGQ+E L+K LE++L
Sbjct: 1176 IVKLHGMPKSIVSDRDKVFTSAFWQHLFKMQGTSLAMSSAYHPQTDGQTEVLNKTLELFL 1235

Query: 1159 RCFTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELR 980
            RCFTF NPK W+K ++WAEYWYNT+F TSIGMTPFKA+YGRDPP L +Y  Q  DP  LR
Sbjct: 1236 RCFTFHNPKSWFKVMSWAEYWYNTAFQTSIGMTPFKALYGRDPPYLTKYEVQVDDPPALR 1295

Query: 979  QQLTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRN 800
            ++L +RD IL+QLK NL  AQ+ MK QADK R ++  ++GDLVLVKLQPY+Q SVALR+N
Sbjct: 1296 EELMERDQILQQLKTNLERAQQYMKQQADKHRREVSFKVGDLVLVKLQPYKQQSVALRKN 1355

Query: 799  QKLGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVT 620
            QKLGMRYFGPF V+  VG VAYKL+LPE  KIHPVFH+SQLKPF G + EQY PLPLT++
Sbjct: 1356 QKLGMRYFGPFEVIACVGKVAYKLQLPENAKIHPVFHVSQLKPFHGTSQEQYLPLPLTMS 1415

Query: 619  EHDPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKV 440
            +  P+ QP  ILQ RT+ +G + + Q  ++W+    E+A+WE + EL+  FP  NLEDKV
Sbjct: 1416 DTGPIFQPATILQARTIVRGNKKVHQLQIQWDLNSPEEASWEDLDELQNKFPNINLEDKV 1475

Query: 439  VFNGDGDVMGKIGNSNIVEESNA 371
            VF G+G VM +  N+NI+E S +
Sbjct: 1476 VFKGEGIVM-RPNNTNILEASES 1497


>dbj|GAU27453.1| hypothetical protein TSUD_161390 [Trifolium subterraneum]
          Length = 1531

 Score = 1073 bits (2775), Expect = 0.0
 Identities = 517/835 (61%), Positives = 657/835 (78%), Gaps = 12/835 (1%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ VL K+VLVFFDDILVYS +WHEHL+HL AVLQ L+ + 
Sbjct: 696  MPFGLTNAPATFQSLMNTIFQIVLRKYVLVFFDDILVYSKTWHEHLKHLAAVLQVLKDNE 755

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            L++KLSKCSFG LE+EYLGH++         SK+Q V++WP+P NIKQLRGFL LTGYYR
Sbjct: 756  LYVKLSKCSFGVLEIEYLGHVVSGEGVYMDKSKIQVVVDWPSPKNIKQLRGFLGLTGYYR 815

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFI+SYAK+A  LTDL++KD + WN     AFQ+LK A+T+APVLALP+F +PFILE DA
Sbjct: 816  RFIQSYAKIASPLTDLLKKDAYTWNSEMEAAFQKLKHAITTAPVLALPDFTKPFILETDA 875

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVLHQ+ HPIAYFSKKL PR Q+KSAYFRE+LAI EA+AKFRHYLLGHKF+I T
Sbjct: 876  SGIGIGAVLHQEGHPIAYFSKKLVPRNQRKSAYFREMLAIAEAIAKFRHYLLGHKFIIRT 935

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLR+L++Q+LQTP+Q EWLH+FLGYDFTIEYKPGKEN+AAD+LSRV  +  S  Q +
Sbjct: 936  DQKSLRNLMEQALQTPDQQEWLHRFLGYDFTIEYKPGKENVAADALSRVMTLAWSEPQYK 995

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
             L + +    QD+ + ++++KC     +  +YT++D LL+WK R+V+P+++ + Q +L E
Sbjct: 996  LLHQIRVALKQDSTLLEIMEKCAQNSDSNSNYTIKDDLLFWKHRIVIPKHSELRQQVLYE 1055

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
             H+SPIGGHAG+ RT+A + AQF+   MK DI +++  C ICQ+AK+ +T PAGLLQPLP
Sbjct: 1056 LHTSPIGGHAGIARTLARVKAQFYWLDMKTDIAKYVQNCVICQKAKTTNTPPAGLLQPLP 1115

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP+Q+WED+AM+FI GLP S G+TTILVV+D+L+KY HFI LK+D++SK VAE FM++IV
Sbjct: 1116 IPSQVWEDVAMDFITGLPSSHGYTTILVVIDRLTKYAHFIPLKTDYSSKIVAEAFMDNIV 1175

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHGMPKSIVSDRDKVFTS+FW+ LF+LQGT+L MS+AYHPQSDGQSE L+K LE++LRC
Sbjct: 1176 KLHGMPKSIVSDRDKVFTSSFWQQLFKLQGTSLAMSSAYHPQSDGQSEVLNKTLELFLRC 1235

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            FTF NPK W KAL W+E+WYNT+F TSIGMTPFKA+YGRDPP+++RY  Q++D   L+++
Sbjct: 1236 FTFENPKSWCKALAWSEFWYNTAFQTSIGMTPFKALYGRDPPAIIRYEIQASDSPTLQEK 1295

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L +RD I++QLK NL  AQ+ MK QADK R D++LQ+GD VLVKLQPYRQ SVALR+NQK
Sbjct: 1296 LMERDRIIQQLKLNLEKAQQYMKKQADKHRVDVKLQVGDWVLVKLQPYRQQSVALRKNQK 1355

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LGM+YFGPF V+ KVG VAYKLKLP+  KIHPVFH+SQLKPFKG+N EQY PLPL++T+ 
Sbjct: 1356 LGMKYFGPFEVIAKVGEVAYKLKLPDHAKIHPVFHVSQLKPFKGDNQEQYMPLPLSMTDI 1415

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             PM+QP  +L  RT+ +  + I Q L++W+  P  +ATWE +  L+  FPTFNLEDKV F
Sbjct: 1416 GPMIQPVAVLATRTIIRCAQRIQQVLIQWDQYPIAEATWEDMVALQRKFPTFNLEDKVAF 1475

Query: 433  NGDGDVMGKIGNSNIVEESNAVGANL------------PRRGERKKITNSQLRDF 305
             GDG VM      NI+EE ++                 PRRG+R +  + +L  +
Sbjct: 1476 IGDGIVMSP-NEENILEEGDSSNVGPPDKHEGNYVMMGPRRGKRMRNISKRLEGY 1529


>gb|PNY16560.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1525

 Score = 1053 bits (2724), Expect = 0.0
 Identities = 525/830 (63%), Positives = 633/830 (76%), Gaps = 7/830 (0%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQCLMN+IFQP L KFVLVFFDDILVYSPS+  HL+HLE VLQ LQ H 
Sbjct: 696  MPFGLTNAPASFQCLMNQIFQPFLRKFVLVFFDDILVYSPSFAAHLKHLEIVLQILQDHT 755

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            LF+KLSKC+FG  +V+YLGH +         SK+Q VL+WPTP NIKQLRGFL LTGYYR
Sbjct: 756  LFVKLSKCAFGIQQVDYLGHTVLGSGVAMDRSKIQTVLDWPTPENIKQLRGFLGLTGYYR 815

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            +FIKSYA++A  LT+L++KD F WN    +AF  LK+A+TSAPVLALP F  PF LE DA
Sbjct: 816  KFIKSYAQIATPLTELLKKDAFKWNHAAEMAFSTLKKAITSAPVLALPQFTIPFTLETDA 875

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG+G+GAVL Q  HPIA+FS+KL PRMQK+SAY RE  AITEA+AKFRHYLLGHKF+I T
Sbjct: 876  SGSGIGAVLSQNGHPIAFFSRKLGPRMQKQSAYTREFFAITEAIAKFRHYLLGHKFIIKT 935

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSL+SL+DQSLQTPEQ  WLHKFLGYDFT+EYKPGKEN+AAD+LSRV ++  S     
Sbjct: 936  DQKSLKSLMDQSLQTPEQQAWLHKFLGYDFTVEYKPGKENLAADALSRVMLLAWSQPTSL 995

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
            FL+EFK+ C+Q+  IQ +  K        PH T++D L++WK RL+VP+ +++   IL+E
Sbjct: 996  FLQEFKQACNQEEEIQQIKLKWNENRGYNPHVTIKDDLVFWKGRLMVPQVSHIRDQILQE 1055

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            FH+S IGGHAG+ RTMA I AQF+  +MK DI  F+ QC +CQQAK     PAGLLQPLP
Sbjct: 1056 FHNSAIGGHAGIARTMARITAQFYWKNMKNDITHFVQQCVVCQQAKHETRNPAGLLQPLP 1115

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP Q+WED+AM+FI GLP S+GFT I+VV+D+LSKY HF  LK+D++SK VAEVFM +IV
Sbjct: 1116 IPDQVWEDVAMDFITGLPNSYGFTVIMVVIDRLSKYSHFSPLKTDYSSKIVAEVFMRNIV 1175

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHG+PKSIVSDRDKVF S FWK LFQLQGTTL M++AYHPQSDGQSEAL+K LEMYLRC
Sbjct: 1176 KLHGVPKSIVSDRDKVFMSKFWKELFQLQGTTLAMTSAYHPQSDGQSEALNKCLEMYLRC 1235

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
             TF NPK W+KAL  AE WYNT+FHTS+GMTPFK +YGRDPP+++R    ++     +QQ
Sbjct: 1236 LTFQNPKSWFKALDLAELWYNTAFHTSLGMTPFKLLYGRDPPTIIRQESSTSGATMAQQQ 1295

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L DRD IL Q K NL  AQ+ MK QADK+R ++QL++GD VLVKLQPYRQ SVALR+NQK
Sbjct: 1296 LQDRDAILTQAKLNLERAQQYMKTQADKRRHELQLEVGDNVLVKLQPYRQQSVALRKNQK 1355

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LGMRYFGPF V+ K+G VAYKL+LP   KIHPVFH+SQLK FKGN  + YFPLP    E 
Sbjct: 1356 LGMRYFGPFTVMAKIGTVAYKLQLPPEAKIHPVFHISQLKLFKGNCSQPYFPLPALTNEL 1415

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             P++QP  ILQ R L QG + I Q LV+WEN+  E+ATWE + + +  FP +NLEDKV  
Sbjct: 1416 GPVLQPGDILQARQLVQGKKTIQQILVRWENLTAEEATWEELEDFRQQFPNYNLEDKVEV 1475

Query: 433  NGDGDVMGKIGNS--NIVEES--NAVGANLPRRGERKKIT---NSQLRDF 305
             G  DV   I  S  +I+EES  N  G  +P     +K T   N +L+DF
Sbjct: 1476 IGGSDVREPIEESQLDIIEESTVNTRGQEIPIENVHEKRTRTLNIRLKDF 1525


>dbj|GAU44596.1| hypothetical protein TSUD_187860 [Trifolium subterraneum]
          Length = 1267

 Score = 1034 bits (2673), Expect = 0.0
 Identities = 509/840 (60%), Positives = 637/840 (75%), Gaps = 18/840 (2%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ VL ++VLVFFDDIL+YS +W +HL+HL+A+L  LQ + 
Sbjct: 465  MPFGLTNAPATFQSLMNHIFQHVLRRYVLVFFDDILIYSSTWQDHLKHLDALLTILQDNT 524

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            L++KLSKCSFG LE+EYLGHI+          K+  V+NWP PTN+KQLRGFL LTGYYR
Sbjct: 525  LYVKLSKCSFGVLEIEYLGHIVTGQGVSMDKDKINNVINWPVPTNVKQLRGFLGLTGYYR 584

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIKSYAK+A  LTDL++K+ + WN++  LAFQQLK A+T+APVLALPNFK PFILE DA
Sbjct: 585  RFIKSYAKIASPLTDLLKKEAYQWNDQAALAFQQLKTAVTTAPVLALPNFKMPFILETDA 644

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVLHQQ HPIAYFSKKL PR QKKSAYFRE+LAI EA+AKFRHYLLGHKF+I T
Sbjct: 645  SGVGIGAVLHQQGHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLGHKFIIRT 704

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLRSL++QSLQTPEQ EWLHKFLGYDFTIEYKPGKENIAAD+LSRV  +  S  + +
Sbjct: 705  DQKSLRSLMEQSLQTPEQQEWLHKFLGYDFTIEYKPGKENIAADALSRVMTLSWSEPKCQ 764

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
            F+ + K     D+ ++D+++K     AA   Y++++GLLYWKQRLVVPR+N+++  +L E
Sbjct: 765  FIDQIKIALQNDSHMKDIMQKSALGKAA-IQYSIKEGLLYWKQRLVVPRDNDLLHKLLFE 823

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            FH+SPIGGH+G+TRT+A I +QF+   MK DI +++ +C +CQQAK+ +T PAGLLQPLP
Sbjct: 824  FHTSPIGGHSGITRTIARIKSQFYWPDMKNDIVEYVQKCVVCQQAKTTNTSPAGLLQPLP 883

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP+Q+WED+AM+FI GLP S+G+TTI+VVVD+L++Y HFIA+KSD+TSK VAE FM++IV
Sbjct: 884  IPSQVWEDIAMDFITGLPSSYGYTTIMVVVDRLTQYAHFIAMKSDYTSKTVAEAFMHNIV 943

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHGMPKSIVSDRDKVFTS FW+HLF+LQGT+L MS+AYHPQSDGQ+E L+K LE++LRC
Sbjct: 944  KLHGMPKSIVSDRDKVFTSTFWQHLFKLQGTSLAMSSAYHPQSDGQTEVLNKALELFLRC 1003

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            FTF NPK W+K L+W+EYWYNTSF TSIGMTPF+A+YGR PP L +Y PQS DP  L+++
Sbjct: 1004 FTFHNPKSWFKVLSWSEYWYNTSFQTSIGMTPFQALYGRVPPYLTKYEPQSNDPPALQEE 1063

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L +RD IL+QLK                                     Q SVALR+NQK
Sbjct: 1064 LIERDRILQQLK-------------------------------------QQSVALRKNQK 1086

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LGMRYFGPF ++  VG VAYKL LP+  KIHPVFH+SQLKPFKG+  EQY PLPLT++E 
Sbjct: 1087 LGMRYFGPFEIISCVGNVAYKLNLPDNAKIHPVFHVSQLKPFKGDAQEQYLPLPLTMSED 1146

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             P++QP  +LQ RT+++GT+ + Q  V+WE    ++ TWE + +LK  FPT NLEDKVVF
Sbjct: 1147 GPIIQPTTVLQARTIRRGTQKVHQLQVQWEK--NDEPTWEDLDDLKSKFPTLNLEDKVVF 1204

Query: 433  NGDGDVM----GKIGNSNIVEESNAVGANL--------------PRRGERKKITNSQLRD 308
             GDG VM      +   N+V +S  V  N+              PRR +R + T+S  +D
Sbjct: 1205 KGDGIVMKPNSTNLLEGNVVAKSIGVPQNMQEGNSVAESKEMMGPRRSQRMRKTHSMWKD 1264


>dbj|GAU12540.1| hypothetical protein TSUD_182540 [Trifolium subterraneum]
          Length = 1451

 Score = 1033 bits (2670), Expect = 0.0
 Identities = 500/808 (61%), Positives = 633/808 (78%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ  L K+VLVFFDDILVYS +W +HL HL+ VL+TLQ + 
Sbjct: 661  MPFGLTNAPATFQSLMNHIFQHALRKYVLVFFDDILVYSSTWQDHLNHLDTVLKTLQDND 720

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            LF+KLSKCSFG +E+EYLGH++          KV+A+L WPTP NIKQLRGFL LTGYYR
Sbjct: 721  LFVKLSKCSFGVVEIEYLGHLVTGQGVSMDKDKVRAILEWPTPNNIKQLRGFLGLTGYYR 780

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIK YA+LA  LTDL++K+N+ WN +T + FQ+LK AMTSAPVLALPNF++PFI E DA
Sbjct: 781  RFIKHYARLAAPLTDLLKKENYYWNAQTEMGFQELKVAMTSAPVLALPNFQKPFIPETDA 840

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG                         +KKSAYFRE+LAI+EA+AKFRHY LGH+F+I T
Sbjct: 841  SGY---------------------QGTRKKSAYFREMLAISEAIAKFRHYFLGHRFIIRT 879

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLRSL+DQSLQTP+Q +WLHKFLGYDF IEYKPGKEN+AAD+LSRV  +  S    +
Sbjct: 880  DQKSLRSLMDQSLQTPDQQQWLHKFLGYDFVIEYKPGKENLAADALSRVMTLAWSEPISQ 939

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
             + + K+    DT+  D++ KC +   ++  YT+R+G+LYWK R+V+P+ + +IQ +L E
Sbjct: 940  IIIQIKDEIKADTYWSDIMDKCKSQGNSYLQYTLREGVLYWKNRVVIPKKSALIQQVLHE 999

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            FHSSPIGGHAG TRT+A I +QF+  +MK+D+ ++I  C ICQQAK  +TLPAGLLQPLP
Sbjct: 1000 FHSSPIGGHAGFTRTLARIKSQFYWIAMKKDVLEYIQNCAICQQAKHTNTLPAGLLQPLP 1059

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP+Q+WED+AM+FI GLP S+G+TTILVV+D+L+KY HF+ +K+D++SK VAEVFMN+IV
Sbjct: 1060 IPSQVWEDIAMDFITGLPLSYGYTTILVVIDRLTKYAHFLPMKTDYSSKSVAEVFMNNIV 1119

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHGMPKSIVSDRDKVFTS+FW+HLF+LQGT+L MS+AYHPQSDGQ+E L+K LE++LRC
Sbjct: 1120 KLHGMPKSIVSDRDKVFTSSFWQHLFKLQGTSLAMSSAYHPQSDGQTEVLNKGLELFLRC 1179

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            FTF NPK WYKAL W+E+WYNT+ HTSIGMTPFKA+YGR+PP+L RY  Q  DP  L+++
Sbjct: 1180 FTFNNPKSWYKALAWSEFWYNTALHTSIGMTPFKALYGREPPTLTRYEVQDNDPPALQEE 1239

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L +RD IL+QLK NL  AQ+ MK QADK R + +  +GD+VLVKLQPYRQ SVALR+NQK
Sbjct: 1240 LMERDRILQQLKSNLERAQQYMKKQADKHRVEFKFHLGDMVLVKLQPYRQQSVALRKNQK 1299

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LGMRYFGPF ++  VG VAYKLKLP+  KIH VFH+SQLKPFKG   +QY PLPLT+ ++
Sbjct: 1300 LGMRYFGPFEIIACVGKVAYKLKLPDHAKIHLVFHVSQLKPFKGVPQQQYMPLPLTMFDN 1359

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             PM+QP ++LQ RT+ QGT+ I Q LV+W+     +ATWE+V +L+ NFP +NLEDKV+F
Sbjct: 1360 GPMIQPVEVLQARTIMQGTQKIHQILVQWDQYDIAEATWENVDDLQKNFPLYNLEDKVIF 1419

Query: 433  NGDGDVMGKIGNSNIVEESNAVGANLPR 350
             GDG VM   G  +I+E + +  +N+P+
Sbjct: 1420 KGDGIVMRPKG-EDILEANKS--SNIPQ 1444


>gb|PNX98300.1| Ty3/gypsy retrotransposon protein, partial [Trifolium pratense]
          Length = 1139

 Score = 1021 bits (2639), Expect = 0.0
 Identities = 501/786 (63%), Positives = 605/786 (76%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN++FQ +L K VLVFFDDILVYSPSW+EHL HL  VLQ L+ H 
Sbjct: 256  MPFGLTNAPATFQSLMNQVFQHLLRKCVLVFFDDILVYSPSWNEHLLHLHEVLQLLRDHC 315

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            L+ K+SKCSFG  +++YLGHI+         SKV+AV+ WP P NIKQLRGFL LTGYYR
Sbjct: 316  LYAKVSKCSFGVTKIDYLGHIVSGNGVEMDDSKVKAVMEWPLPCNIKQLRGFLGLTGYYR 375

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIK+YA +A  LT L++KD F W+     AF +L++A+T APVLALPNFKE F+LE DA
Sbjct: 376  RFIKNYALIALPLTALLKKDQFQWSSEATDAFHKLQQAITQAPVLALPNFKEDFVLETDA 435

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG+GVGAVL Q  HPIA+FSKKL PRMQ++SAY REL AITEA+AKFRHYLLGH+F+I T
Sbjct: 436  SGSGVGAVLSQNHHPIAFFSKKLNPRMQRQSAYVRELYAITEAMAKFRHYLLGHRFIIRT 495

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSL+SL+DQ++QTPEQ  WLHKFLG+DFTIEYKPG++NIAAD+LSR FMM  S  Q  
Sbjct: 496  DQKSLKSLMDQTIQTPEQQNWLHKFLGFDFTIEYKPGRDNIAADALSRSFMMAFSSQQSL 555

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
             L + +    QD  +  +   C    A  P YTV+  +L+WK RLVVP++ +++  IL E
Sbjct: 556  LLHQIRLAIQQDHELAAIKALCIEGKAPDPFYTVQHDMLFWKNRLVVPKSPHIVNQILLE 615

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            +H+SP+GGH+GV RT A I  QF    M +DI +F+ +C  CQQAKS+  LPAGLLQPLP
Sbjct: 616  YHASPVGGHSGVQRTKARICQQFFWPHMSKDITKFVTECLTCQQAKSSTALPAGLLQPLP 675

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP QIWED+AM+FI GLPPS GFT I VVVD+LSKYGHF  LKSDF +  VA  F N+IV
Sbjct: 676  IPLQIWEDIAMDFITGLPPSNGFTVIFVVVDRLSKYGHFTPLKSDFDAPKVAAAFFNNIV 735

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHG+PKSIVSDRDKVFTS FW+ LF+L GTTL MSTAYHPQ+DGQSEAL+K LEMYLRC
Sbjct: 736  KLHGIPKSIVSDRDKVFTSQFWQQLFRLSGTTLAMSTAYHPQTDGQSEALNKCLEMYLRC 795

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            FT TNPK W + L WAEYWYNT+F  SI MTPFKAVYGRDPPSL+RY+PQS DP  L++ 
Sbjct: 796  FTGTNPKSWARLLPWAEYWYNTAFQNSIAMTPFKAVYGRDPPSLIRYVPQSNDPPNLQEL 855

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L +RDV+L+QLK NL  AQ  MK  ADKKR  ++ Q+GD VLVKLQPYRQHSV LR+NQK
Sbjct: 856  LIERDVVLQQLKSNLLTAQGFMKKFADKKRRILEFQVGDSVLVKLQPYRQHSVVLRKNQK 915

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LG+RYFGPF V+ KVG VAY+L+LP  TKIHPVFH+S LKP KG +   Y PLPL    H
Sbjct: 916  LGLRYFGPFTVLAKVGPVAYRLQLPPGTKIHPVFHVSLLKPCKGEHDNTYLPLPLLQHAH 975

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             P++ P ++LQ R +    +LI+QAL++W+ +   +ATWE    LK N+P+ NLEDKVVF
Sbjct: 976  GPLLTPLRVLQTRMVPSNGQLIAQALIQWDGLTEAEATWEDCLTLKKNYPSLNLEDKVVF 1035

Query: 433  NGDGDV 416
            NG G+V
Sbjct: 1036 NGGGNV 1041


>dbj|GAU19157.1| hypothetical protein TSUD_79800 [Trifolium subterraneum]
          Length = 1500

 Score = 1013 bits (2618), Expect = 0.0
 Identities = 501/844 (59%), Positives = 633/844 (75%), Gaps = 21/844 (2%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN IFQ  L ++VLVFFDDIL+YS SW+EHL+HL+ VL  LQ + 
Sbjct: 696  MPFGLTNAPATFQSLMNHIFQHALRRYVLVFFDDILIYSSSWYEHLKHLDVVLAILQDNT 755

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            L++KLSKCSFG LE+EYLGHI+          KV AV+NWP PTN+KQLRGFL+L     
Sbjct: 756  LYVKLSKCSFGVLEIEYLGHIVTGQGVSMDKDKVTAVINWPVPTNVKQLRGFLDL----- 810

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
                                          AFQQLK A+T+APVLALPNFK PFILE DA
Sbjct: 811  ------------------------------AFQQLKSAVTTAPVLALPNFKMPFILETDA 840

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVLHQQ HPIAYFSKKL PR QKKSAYFRE+LAI EA+AKFRHYLLGHKF+I T
Sbjct: 841  SGIGIGAVLHQQGHPIAYFSKKLVPRNQKKSAYFREMLAIAEAIAKFRHYLLGHKFIIRT 900

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLRSL++QSLQTPEQ EWLHKFLGYDFTIEYKPGK+N+AAD+LSR+  +  S  +  
Sbjct: 901  DQKSLRSLMEQSLQTPEQQEWLHKFLGYDFTIEYKPGKDNMAADALSRIMTLSWSEPKCH 960

Query: 1873 FLKEFKEICSQDTWIQDMVKKC--GNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAIL 1700
            F++E K     DT ++D+++K   G  P     Y+ ++GLLYWKQRLV+PR++N++  +L
Sbjct: 961  FIEEVKIALQNDTQMKDIMQKSLLGKAPV---QYSTKEGLLYWKQRLVIPRDSNLLHKVL 1017

Query: 1699 KEFHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQP 1520
             EFH+SPIGGH+ +TRT+A I +QF+   MK+DI +++ +C +CQQAK+ +T PAGLLQP
Sbjct: 1018 FEFHTSPIGGHSSITRTLARIKSQFYWPDMKKDIIEYVQKCIVCQQAKTTNTSPAGLLQP 1077

Query: 1519 LPIPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNH 1340
            LPIP+Q+WED+AM+FI GLP SFG+ TI+VVVD+L+KY  FI +KSD+TSK VAE FM++
Sbjct: 1078 LPIPSQVWEDIAMDFITGLPSSFGYNTIMVVVDRLTKYADFIPMKSDYTSKSVAETFMHN 1137

Query: 1339 IVKLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYL 1160
            IVKLHGMPKSIVSDRD+VFTS FW+HLF+LQGT+L MS+AYHPQSDGQ+E L+K LE++L
Sbjct: 1138 IVKLHGMPKSIVSDRDRVFTSTFWQHLFKLQGTSLAMSSAYHPQSDGQTEVLNKALELFL 1197

Query: 1159 RCFTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELR 980
            RCFTF NPK W+K L+W+EYWYNTSF TSIGMTPF+A+YGR PP L +Y+PQ  DP  L+
Sbjct: 1198 RCFTFNNPKSWFKVLSWSEYWYNTSFQTSIGMTPFQALYGRLPPYLTKYVPQENDPPTLQ 1257

Query: 979  QQLTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRN 800
             +L +RD +L+QLK NL  AQ+ MK QADK R D+  Q+GD VL+KLQPYRQHSVALR+N
Sbjct: 1258 AELIERDNLLQQLKTNLERAQQYMKKQADKHRRDISYQVGDFVLIKLQPYRQHSVALRKN 1317

Query: 799  QKLGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVT 620
            QKLGMRYFGPF ++  VG +AYKL LPE  KIHPVFH+SQLKPFKG   +QY PLPLT++
Sbjct: 1318 QKLGMRYFGPFEIIACVGTIAYKLNLPENAKIHPVFHVSQLKPFKGTTQDQYMPLPLTMS 1377

Query: 619  EHDPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKV 440
            E  P++QP  +LQ RT+++G + + Q  ++W+     +A+WE + +LK  FPT NLEDKV
Sbjct: 1378 ETGPIIQPIAVLQARTIQRGMQKVHQVQIQWDQ--TAEASWEDLDDLKNKFPTLNLEDKV 1435

Query: 439  VFNGDGDVMGKIGNSNIVE---ESNAVG--ANL--------------PRRGERKKITNSQ 317
            V  G G ++ K   +NI+E    +N++G   N+              PRRG+R + T+  
Sbjct: 1436 VVEG-GSIVMKPNINNILEAKVPANSIGDPQNMYDGNSVAEIKEDLGPRRGKRVRKTHGI 1494

Query: 316  LRDF 305
             +D+
Sbjct: 1495 WKDY 1498


>dbj|GAU29525.1| hypothetical protein TSUD_115470 [Trifolium subterraneum]
          Length = 1556

 Score = 1009 bits (2609), Expect = 0.0
 Identities = 499/845 (59%), Positives = 619/845 (73%), Gaps = 22/845 (2%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGLSNAPA FQCLMNE+FQ  L KFVLVFFDDILVYSP W  HL HLE VL TL++ +
Sbjct: 712  MPFGLSNAPASFQCLMNEVFQFALRKFVLVFFDDILVYSPDWSAHLDHLERVLLTLKQQV 771

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            L++KLSKCSFG L+V+YLGH +          KV+ + +WP P N+KQLRGFL LTGYYR
Sbjct: 772  LYVKLSKCSFGMLQVDYLGHTVSGMGVAMDKEKVRVIADWPLPINVKQLRGFLGLTGYYR 831

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIK+Y+++A  LT+L++K+ F W++    AF  LK  +++APVLALP+F +PFILE DA
Sbjct: 832  RFIKAYSQIAAPLTNLLKKEGFHWDDTATTAFYNLKLVISTAPVLALPDFSKPFILETDA 891

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            S TG+GA+L Q+ HPIA+FSKKL P  QK+SAY RE  AITEALAKFRHYLLGHKF+I T
Sbjct: 892  SNTGIGAILSQEGHPIAFFSKKLGPTAQKQSAYVREFRAITEALAKFRHYLLGHKFIIRT 951

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSL++LL+Q+LQTPEQ  WLHKF+G+DFTIEYKPGKEN+A D+LSR+ ++  S     
Sbjct: 952  DQKSLKALLEQTLQTPEQQAWLHKFIGFDFTIEYKPGKENLAVDALSRINLLAWSEPHYS 1011

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
            FL E +    QDT +++++++C N   A  +YTV+D LL+W+QRLV+P N+ +IQ IL E
Sbjct: 1012 FLDELRLEIQQDTHLKEIIQQCLNNSCADANYTVKDNLLFWQQRLVIPENSTLIQKILLE 1071

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            FHSSPIGGH+G+TRTMA I +QF+ T M+Q I  FI  C ICQQAK+  T PAGLL PLP
Sbjct: 1072 FHSSPIGGHSGITRTMARIASQFYWTHMRQHIVAFIKHCVICQQAKTTTTTPAGLLAPLP 1131

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP  +W D+AM+FI GLPPS GFT ILVV+D+L+KY HF  LKSDF SK VAE+FM +IV
Sbjct: 1132 IPTLVWADIAMDFITGLPPSNGFTVILVVIDRLTKYAHFFPLKSDFDSKKVAEIFMQNIV 1191

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHGMP SIVSDRDKVFTS FW+HLF+L GTTL M++AYHPQSDGQSE L+K +EMYLRC
Sbjct: 1192 KLHGMPSSIVSDRDKVFTSAFWRHLFKLHGTTLAMTSAYHPQSDGQSEVLNKCVEMYLRC 1251

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
             TF NP  W KAL W E+WYNTS+HTS  MTPFKA+YG DPP L+R    + D  +L+ Q
Sbjct: 1252 MTFDNPTKWSKALPWTEFWYNTSYHTSAAMTPFKALYGSDPPQLVRTKGTTDDHPDLQTQ 1311

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L +R+ +L QL+ NL  AQ+ MK QADKKR  ++ ++ D VLVKLQPYRQ SVALR++QK
Sbjct: 1312 LAEREDLLSQLQVNLHKAQQAMKFQADKKRHHVEFKVDDQVLVKLQPYRQSSVALRKHQK 1371

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LG+RYFGPF +V KVG VAY+L LP TTKIHPVFH+SQLK F G ++  Y PLPLT +E 
Sbjct: 1372 LGLRYFGPFPIVAKVGVVAYRLGLPSTTKIHPVFHVSQLKLFHGPHIPPYMPLPLTTSEL 1431

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             P++QPE +L  R + +G   ISQ L+ WE +    ATWE + E K+  P FNLEDKV  
Sbjct: 1432 GPILQPEALLDSRLIMRGNTPISQVLISWEGLETADATWEDLVEFKLAHPNFNLEDKVTL 1491

Query: 433  NGDGDVMGKIGN----------------------SNIVEESNAVGANLPRRGERKKITNS 320
            NG   V   I N                      SN V   + VG    RR  RK+I ++
Sbjct: 1492 NGGSIVRDPIINMDSQNNESAEDNESALKDEAEASNSVMNPDIVGL---RRSTRKRIEST 1548

Query: 319  QLRDF 305
            +L  +
Sbjct: 1549 RLEGY 1553


>dbj|GAU23504.1| hypothetical protein TSUD_39830 [Trifolium subterraneum]
          Length = 1160

 Score =  987 bits (2552), Expect = 0.0
 Identities = 484/740 (65%), Positives = 578/740 (78%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQCLMN+IFQP+L K+VLVFFDDILVYSPS+  HLQHLE VLQ LQ H 
Sbjct: 410  MPFGLTNAPASFQCLMNQIFQPLLRKYVLVFFDDILVYSPSFSTHLQHLETVLQILQHHT 469

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            LF+KLSKCSFG  EV+YLGH +          KVQ VL+WP PTN+KQLRGFL LTGYYR
Sbjct: 470  LFVKLSKCSFGMKEVDYLGHTVSGSGVAMDKLKVQTVLDWPKPTNVKQLRGFLGLTGYYR 529

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIKSYA +A  LT+L++K+ F WN     AF  LK A+TSAPVLALP F +PF LE DA
Sbjct: 530  RFIKSYATIATPLTNLLKKEAFEWNSNAEQAFSHLKSAITSAPVLALPQFNQPFTLETDA 589

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SGTGVGAVL Q  HPIA+FSKK+ PRMQK+SAY REL AITEA+AKFRHYLLGHKF I T
Sbjct: 590  SGTGVGAVLSQGGHPIAFFSKKMVPRMQKQSAYTRELFAITEAIAKFRHYLLGHKFTIKT 649

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSLRSL+DQSLQTPEQ  WLHKF+GYDF IEYKPGKEN+AAD+LSRV ++  S  + +
Sbjct: 650  DQKSLRSLMDQSLQTPEQQAWLHKFIGYDFNIEYKPGKENVAADALSRVLLVAWSEPKLQ 709

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
            FL E +   S D  ++ M  +        P Y   DGL+++  R++VP +  + + IL E
Sbjct: 710  FLDELRAATSNDADLRTMSSQD-------PRYVHHDGLIFFNNRIMVPTHQELKEKILFE 762

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            FHSSPIGGHAG+TRT+A I+AQF+  +MKQDIQQF+  C ICQQAK     PAGLLQPLP
Sbjct: 763  FHSSPIGGHAGITRTLARISAQFYWVNMKQDIQQFVQNCVICQQAKHETRAPAGLLQPLP 822

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP Q+WED+AM+FI GLP S G+T I+VV+D+L+KY HFI LK D+ SK VAE FM +IV
Sbjct: 823  IPEQVWEDVAMDFITGLPSSHGYTVIMVVIDRLTKYSHFIPLKMDYNSKSVAEAFMKYIV 882

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHG+PKSIVSDRDKVF S FWK LF+LQGTTL MS+AYHPQ+DGQSEAL+K LEMYLRC
Sbjct: 883  KLHGLPKSIVSDRDKVFVSQFWKDLFKLQGTTLAMSSAYHPQTDGQSEALNKCLEMYLRC 942

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
             TF  PK W KAL WAEYWYNT+ HTS+GMTPF+A+YGR PPSL+RY P   D A ++QQ
Sbjct: 943  LTFQQPKTWSKALDWAEYWYNTAHHTSLGMTPFRALYGRHPPSLVRYHPSPHDAATVQQQ 1002

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L+DRD +L Q+K NL  AQ+ MK QADK R  +  ++GD VLVKLQPYRQ+S+ALR++QK
Sbjct: 1003 LSDRDNLLAQIKVNLCRAQQVMKDQADKHRRHVVFEVGDKVLVKLQPYRQNSIALRKHQK 1062

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LGMR+FGPF +++KVG VAYKL+LP   +IHPVFH+SQLK FKG+  E Y PLPLT  E 
Sbjct: 1063 LGMRFFGPFTIIEKVGMVAYKLQLPTEARIHPVFHISQLKLFKGSCSEPYMPLPLTTHEL 1122

Query: 613  DPMMQPEKILQRRTLKQGTE 554
             P++QP ++LQ R + +GTE
Sbjct: 1123 GPILQPARVLQDRVVLKGTE 1142


>gb|PNX92398.1| Ty3/gypsy retrotransposon protein [Trifolium pratense]
          Length = 1571

 Score =  979 bits (2532), Expect = 0.0
 Identities = 486/798 (60%), Positives = 593/798 (74%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGLSNAPA FQ LMN +F+  L KFVLVFFDDILVYSPSW  HL+HLE VL+ LQ + 
Sbjct: 732  MPFGLSNAPASFQSLMNSVFRDQLRKFVLVFFDDILVYSPSWSTHLEHLEVVLRVLQENQ 791

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            LF K SKC FG   V+YLGH I         SK+QAV+ W  P+++KQLRGFL L+GYYR
Sbjct: 792  LFAKFSKCCFGLTSVDYLGHTISNQGVEMDKSKIQAVMEWKIPSSLKQLRGFLGLSGYYR 851

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFI++YA +A  LT+L++KD F W      AF +LK+A+T APVL+LP+F+ PF LE DA
Sbjct: 852  RFIRNYAAIASPLTELLKKDAFQWTSTATEAFNKLKQAITQAPVLSLPDFRLPFTLETDA 911

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG+GVGAVL Q  HPIAYFSKKL PRMQK+SAY REL AITEALAKFRHYL+GHKFVI T
Sbjct: 912  SGSGVGAVLSQARHPIAYFSKKLCPRMQKQSAYVRELYAITEALAKFRHYLIGHKFVIKT 971

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQ+SL+SL DQS+QTPEQ  WLHKFLGYDFTIEYKPG +NIAADSLSR F    SV   +
Sbjct: 972  DQRSLKSLTDQSIQTPEQQHWLHKFLGYDFTIEYKPGVDNIAADSLSRSFCFALSVQTSQ 1031

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
             +       + D  + ++  +C       PHY V+  +L+WK RLV+P+   +IQ +L E
Sbjct: 1032 LVAMIHTAVNDDPALAEIRNQCLLGTNTAPHYQVKHDMLFWKNRLVIPQKPELIQLLLTE 1091

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            FHSS +GGHAG+TRT A + +QF   +M +DI++F+++C ICQQAK +  +PAGLL PLP
Sbjct: 1092 FHSSALGGHAGITRTKARVASQFFWPTMAKDIKEFVSKCLICQQAKHSTAVPAGLLHPLP 1151

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP QIWEDL+M+FI+GLPPS  +T ILVVVD+LSKY HFI LK D+TS  VAE F+N IV
Sbjct: 1152 IPQQIWEDLSMDFIIGLPPSHTYTVILVVVDRLSKYSHFIPLKGDYTSSKVAEAFVNTIV 1211

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHG PK+IVSDRD+VFTS FW+HLF++ GTTL MSTAYHPQ+DGQSEA++K LE+YLRC
Sbjct: 1212 KLHGFPKTIVSDRDRVFTSQFWQHLFKISGTTLAMSTAYHPQTDGQSEAVNKCLELYLRC 1271

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            FT  +PK W K L WAE+WYNTSFHTSIGMTPFK VYGRDPPSL+RY   + DP  L+Q 
Sbjct: 1272 FTSDSPKQWVKLLPWAEFWYNTSFHTSIGMTPFKVVYGRDPPSLIRYEVNNDDPPLLQQL 1331

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            LT+RD  +  LK NL  AQ+ MK  AD KR  ++ Q+GD+VLVKLQPYRQHSV LRRNQK
Sbjct: 1332 LTERDDTIITLKANLARAQQIMKKFADNKRRFVEFQVGDMVLVKLQPYRQHSVVLRRNQK 1391

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            L MRYFGPF V++++G VAYKL LP + KIHPVFH+S LK  KG +  Q  PLPLT TEH
Sbjct: 1392 LSMRYFGPFPVIERIGQVAYKLMLPPSAKIHPVFHVSALKLCKGEHSTQLMPLPLTTTEH 1451

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             PM+ P  I+ RRT+ Q  + + Q  V+WE +   + TWE   E   ++P  NLEDKV+ 
Sbjct: 1452 GPMLSPIAIIDRRTIIQNAQPVQQVQVQWEGLLPTETTWEKWDEFHSSYP--NLEDKVLV 1509

Query: 433  NGDGDVMGKIGNSNIVEE 380
            N   +VM K  N +  E+
Sbjct: 1510 NEGSNVMIKDNNMSWQEK 1527


>dbj|GAU35592.1| hypothetical protein TSUD_295280 [Trifolium subterraneum]
          Length = 1358

 Score =  973 bits (2516), Expect = 0.0
 Identities = 484/782 (61%), Positives = 576/782 (73%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGLSNAPA FQ LMN++FQ VL KFVLVFFDDILVY+ +W  HL HLE VLQ L  H 
Sbjct: 545  MPFGLSNAPASFQSLMNQVFQKVLRKFVLVFFDDILVYNATWSSHLLHLEIVLQLLDHHK 604

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            LF+KLSKCSFG  EV+YLGH I         +KVQAVL WPTPTN+KQLRGFL LTGYYR
Sbjct: 605  LFVKLSKCSFGMSEVDYLGHTIFGMGVIMDKTKVQAVLQWPTPTNLKQLRGFLGLTGYYR 664

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFIKSYA +A  LTDL++KD+F W++    AF  LK+A+TSAPVL LPNF +PF+LE DA
Sbjct: 665  RFIKSYATIASPLTDLLKKDSFNWSDNAMKAFNTLKQAITSAPVLILPNFSQPFMLETDA 724

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG G+GAVL QQ HPIAYFSKKL P  QK+S Y RE  AITEALAKFRHYLLGHKF+I T
Sbjct: 725  SGIGIGAVLSQQGHPIAYFSKKLGPTSQKQSGYLREFRAITEALAKFRHYLLGHKFIIRT 784

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQ+SL SLLDQ+LQTPEQ  WLHKF+G+DFTIEYKPGK+N AAD+LSR+F +  S  Q +
Sbjct: 785  DQQSLESLLDQTLQTPEQQAWLHKFIGFDFTIEYKPGKDNKAADALSRMFSLSWSEPQSQ 844

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
            FLK+  +   +  +   +  +C +     P Y VRDGLLYW  RL +P  + +I  IL E
Sbjct: 845  FLKDLHQEIQRCDYFYPIFLQCVSDKPLDPAYAVRDGLLYWNNRLAIPPKSAMISKILTE 904

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            FH SPIGGHAG+TRT+A I+AQF    M+Q I Q++ QC+ICQQAK   +LP GLL PLP
Sbjct: 905  FHDSPIGGHAGITRTLARISAQFFWPHMRQTISQYVKQCSICQQAKHTTSLPLGLLCPLP 964

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP  +WED+AM+FI G P S GFT ILVVVD+ +K+GHF ALK DF SK VAE+ M HIV
Sbjct: 965  IPKHVWEDIAMDFITGFPNSGGFTVILVVVDRFTKFGHFFALKKDFDSKKVAEIMMQHIV 1024

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KL+GMPKSIVSDRDKVFTS FW+HLF+LQGTTL MS+AYHPQSDGQ+EAL+K LEMYLRC
Sbjct: 1025 KLYGMPKSIVSDRDKVFTSKFWQHLFKLQGTTLAMSSAYHPQSDGQTEALNKCLEMYLRC 1084

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
             TF NP  W K L  A+YWYNTSFHTS  MTPFKA+YG+DPP+L R              
Sbjct: 1085 LTFANPNIWSKMLHLAQYWYNTSFHTSAAMTPFKALYGKDPPTLTR-------------- 1130

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
                        +NL  AQ+ MK QADKKR  M+  IGD+VLVKLQPYRQ  VA R N K
Sbjct: 1131 ----------SNQNLHKAQQAMKFQADKKRLPMEFTIGDMVLVKLQPYRQTVVATRANHK 1180

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
              ++YFGPF V  K+G++AYKL+LP T +IHPVFH+SQLK F G+  + Y+PL  T T  
Sbjct: 1181 SSLKYFGPFPVTAKIGSIAYKLQLPSTARIHPVFHISQLKKFNGSATDPYYPLSDTTTVL 1240

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             P++QPE IL+ RT+ +G  L+ Q LVKW+++    ATWE   E+  N+P FNLEDK+VF
Sbjct: 1241 GPLLQPESILKVRTILKGPLLVPQVLVKWQDIDESLATWEDKKEILENYPNFNLEDKIVF 1300

Query: 433  NG 428
            NG
Sbjct: 1301 NG 1302


>gb|KYP39589.1| Transposon Ty3-G Gag-Pol polyprotein [Cajanus cajan]
          Length = 1510

 Score =  973 bits (2516), Expect = 0.0
 Identities = 475/794 (59%), Positives = 591/794 (74%)
 Frame = -2

Query: 2773 MPFGLSNAPARFQCLMNEIFQPVLLKFVLVFFDDILVYSPSWHEHLQHLEAVLQTLQRHI 2594
            MPFGL+NAPA FQ LMN+IFQ +L K VLVFFDDILVYS SW  HLQHL+ VL  L +H 
Sbjct: 669  MPFGLTNAPATFQNLMNDIFQGLLRKSVLVFFDDILVYSSSWFLHLQHLQQVLDILAKHE 728

Query: 2593 LFIKLSKCSFGQLEVEYLGHIIXXXXXXXXXSKVQAVLNWPTPTNIKQLRGFLELTGYYR 2414
            L+ K+SKCSFG  +VEYLGH++         SKVQAV++WP P  IKQLRGFL LTGYYR
Sbjct: 729  LYAKMSKCSFGLEQVEYLGHVVSGDGVSMETSKVQAVIDWPVPKTIKQLRGFLGLTGYYR 788

Query: 2413 RFIKSYAKLAESLTDLVRKDNFIWNERTGLAFQQLKEAMTSAPVLALPNFKEPFILEIDA 2234
            RFI+ YA +A  LTDL++KDNF W+     AF  LK+A+T+APVL+LP+F +PF+LE DA
Sbjct: 789  RFIQGYASIANPLTDLLKKDNFKWSNEADAAFIALKQAITTAPVLSLPDFSQPFVLETDA 848

Query: 2233 SGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSAYFRELLAITEALAKFRHYLLGHKFVIVT 2054
            SG+G+GAVL Q  HPIA+FSKKL+ RM K+SAY RE  AITEA+AKFRHYLLGH+F+I T
Sbjct: 849  SGSGIGAVLSQNKHPIAFFSKKLSNRMTKQSAYTREFYAITEAIAKFRHYLLGHRFIIRT 908

Query: 2053 DQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTIEYKPGKENIAADSLSRVFMMICSVAQPE 1874
            DQKSL+SLLDQ+LQTPEQ  WLHKFLGYDF+IEYKPG EN+AAD+LSR F M  +V   +
Sbjct: 909  DQKSLKSLLDQTLQTPEQQAWLHKFLGYDFSIEYKPGTENLAADALSRSFFMASAVTASD 968

Query: 1873 FLKEFKEICSQDTWIQDMVKKCGNTPAAWPHYTVRDGLLYWKQRLVVPRNNNVIQAILKE 1694
             + + K     DT +Q ++       A    Y+  DGLL+WK R+VVP    +   IL+E
Sbjct: 969  LVHQIKAALGSDTALQPILTAHSQGKALSAPYSFLDGLLFWKGRIVVPNVPAIQNQILQE 1028

Query: 1693 FHSSPIGGHAGVTRTMAVINAQFH*TSMKQDIQQFIAQCTICQQAKSAHTLPAGLLQPLP 1514
            FHSSP+GGH+G+ RT A + AQF    M +DI+ F+ QC +CQQAK+A  LPAGLLQPLP
Sbjct: 1029 FHSSPLGGHSGIARTFARVAAQFFWPGMNKDIKNFVQQCCVCQQAKTATVLPAGLLQPLP 1088

Query: 1513 IPAQIWEDLAMNFIVGLPPSFGFTTILVVVDKLSKYGHFIALKSDFTSKFVAEVFMNHIV 1334
            IP QIWED++M+FIVGLPP+ G+T I V+VD+LSKY HF  LKSDF SK VA+VF++ +V
Sbjct: 1089 IPTQIWEDISMDFIVGLPPAEGYTVIFVIVDRLSKYAHFAPLKSDFNSKRVADVFLHTVV 1148

Query: 1333 KLHGMPKSIVSDRDKVFTSNFWKHLFQLQGTTLNMSTAYHPQSDGQSEALSKYLEMYLRC 1154
            KLHG P SIVSDRDKVFTS FW+HL +L GTTL +STAYHPQSDGQ+EAL+K LEMYLRC
Sbjct: 1149 KLHGFPNSIVSDRDKVFTSTFWQHLLKLSGTTLKLSTAYHPQSDGQTEALNKCLEMYLRC 1208

Query: 1153 FTFTNPKGWYKALTWAEYWYNTSFHTSIGMTPFKAVYGRDPPSLLRYIPQSTDPAELRQQ 974
            FT   PK W K L WAE+WYNTSFH S  M+PFK VYGRDPP+L++Y   +TDP  +++ 
Sbjct: 1209 FTHEKPKDWIKFLPWAEFWYNTSFHHSAQMSPFKVVYGRDPPTLVKYSHSATDPPSIQEM 1268

Query: 973  LTDRDVILEQLKKNLT*AQERMKHQADKKRSDMQLQIGDLVLVKLQPYRQHSVALRRNQK 794
            L  RD +L QLK NL  AQ+RMK  AD+KR   +   G++VLVKLQPYRQHS+ALR+NQK
Sbjct: 1269 LLQRDRVLAQLKVNLMLAQQRMKKYADQKRLHKEFVEGEMVLVKLQPYRQHSLALRKNQK 1328

Query: 793  LGMRYFGPFLVVDKVGAVAYKLKLPETTKIHPVFHMSQLKPFKGNNVEQYFPLPLTVTEH 614
            LG+RYFGPF +  ++G+VAYKL LP+  KIHPVFH+SQLK F+G     Y PLPLT    
Sbjct: 1329 LGLRYFGPFPIQKRIGSVAYKLLLPDYAKIHPVFHISQLKQFRGVTDTVYVPLPLTTAVE 1388

Query: 613  DPMMQPEKILQRRTLKQGTELISQALVKWENMPREKATWEHVTELKMNFPTFNLEDKVVF 434
             P++QP ++L  R + Q  +L+ Q LV+WE    + ATWE + +L+ ++P  NLEDKV+ 
Sbjct: 1389 GPVVQPIQVLSVRDIIQAGKLVRQVLVQWEGFGVDAATWEDLDKLEQSYPNINLEDKVIA 1448

Query: 433  NGDGDVMGKIGNSN 392
             G   V  ++   N
Sbjct: 1449 KGGSSVTEEVHEWN 1462


>gb|PNY14541.1| hypothetical protein L195_g011223 [Trifolium pratense]
          Length = 763

 Score =  947 bits (2448), Expect = 0.0
 Identities = 459/736 (62%), Positives = 577/736 (78%), Gaps = 16/736 (2%)
 Frame = -2

Query: 2497 KVQAVLNWPTPTNIKQLRGFLELTGYYRRFIKSYAKLAESLTDLVRKDNFIWNERTGLAF 2318
            KVQAV+NWPTPTN+KQLRGFL LTGYYRRFIKSYAK+A  LTDL +K  + WN+   LAF
Sbjct: 13   KVQAVINWPTPTNVKQLRGFLGLTGYYRRFIKSYAKIASLLTDLHKKAAYEWNDNAELAF 72

Query: 2317 QQLKEAMTSAPVLALPNFKEPFILEIDASGTGVGAVLHQQWHPIAYFSKKLAPRMQKKSA 2138
            QQLK A+TS PVLALPNF +PFILE DASG G+GAVLHQ+ HP A FSKKL  R QKKSA
Sbjct: 73   QQLKTAITSVPVLALPNFHKPFILETDASGVGIGAVLHQEGHPNANFSKKLVLRNQKKSA 132

Query: 2137 YFRELLAITEALAKFRHYLLGHKFVIVTDQKSLRSLLDQSLQTPEQHEWLHKFLGYDFTI 1958
            YFRE+LAI EA+AKFRHYLLGH+FVI TDQKSLRSL+DQSLQTPEQ EWLHKFLGYDFTI
Sbjct: 133  YFREMLAIVEAIAKFRHYLLGHRFVICTDQKSLRSLMDQSLQTPEQQEWLHKFLGYDFTI 192

Query: 1957 EYKPGKENIAADSLSRVFMMICSVAQPEFLKEFKEICSQDTWIQDMVKK--CGNTPAAWP 1784
            EYKPGKEN+AAD+LSR+  +  S  Q + +++ +     D  + +++ K   G  P    
Sbjct: 193  EYKPGKENMAADALSRLMTLSWSEPQCQIVEQIRAALKNDQNMVEIMLKYVSGKAPI--- 249

Query: 1783 HYTVRDGLLYWKQRLVVPRNNNVIQAILKEFHSSPIGGHAGVTRTMAVINAQFH*TSMKQ 1604
             YT+RDGLLYWKQRLV+P+NN+++  IL +FH+SPIGGHAG+TRTM+ I +QF+   M +
Sbjct: 250  QYTMRDGLLYWKQRLVIPKNNDLLHKILYKFHTSPIGGHAGITRTMSRITSQFYWPDMNK 309

Query: 1603 DIQQFIAQCTICQQAKSAHTLPAGLLQPLPIPAQIWEDLAMNFIVGLPPSFGFTTILVVV 1424
            DI  ++ +C ICQQAK+ HT PAGLLQPLPIP+Q+WED+AM+FI GLP S+ +TTI+VVV
Sbjct: 310  DIWDYVQKCVICQQAKTVHTSPAGLLQPLPIPSQVWEDIAMDFITGLPLSYSYTTIMVVV 369

Query: 1423 DKLSKYGHFIALKSDFTSKFVAEVFMNHIVKLHGMPKSIVSDRDKVFTSNFWKHLFQLQG 1244
            D+L+KY HFI ++SD+TSK VAE F+++IVKLHGM KSIVSDRDKVFTSNFW+ LF+LQG
Sbjct: 370  DRLTKYAHFIPMRSDYTSKSVAEAFIHNIVKLHGMSKSIVSDRDKVFTSNFWQQLFKLQG 429

Query: 1243 TTLNMSTAYHPQSDGQSEALSKYLEMYLRCFTFTNPKGWYKALTWAEYWYNTSFHTSIGM 1064
            T+L MS+AYHPQSDGQ+E L+K LE++LRCF+F NPK WYK L+WAEYWYNT+F TSIGM
Sbjct: 430  TSLTMSSAYHPQSDGQTEVLNKGLELFLRCFSFNNPKSWYKVLSWAEYWYNTTFQTSIGM 489

Query: 1063 TPFKAVYGRDPPSLLRYIPQSTDPAELRQQLTDRDVILEQLKKNLT*AQERMKHQADKKR 884
            TPFKA+YGR+PPSL +Y   + D   ++++L +RD IL+QLK NL  AQ+ MK QADK R
Sbjct: 490  TPFKALYGREPPSLTKYEAHADDSPTIQEELMERDKILQQLKTNLDRAQQYMKKQADKNR 549

Query: 883  SDMQLQIGDLVLVKLQPYRQHSVALRRNQKLGMRYFGPFLVVDKVGAVAYKLKLPETTKI 704
            +++ LQ+G+LVLVKLQPYRQ SVALR+NQKLGMRYFGPF ++ ++G VAYKLKLP+  KI
Sbjct: 550  TEVNLQVGELVLVKLQPYRQQSVALRKNQKLGMRYFGPFEIIARIGKVAYKLKLPDNAKI 609

Query: 703  HPVFHMSQLKPFKGNNVEQYFPLPLTVTEHDPMMQPEKILQRRTLKQGTELISQALVKWE 524
            HPVFH+SQLKPFKG   +QY PLPLT++E  P++QP  IL  RT+ + ++ + Q L++W+
Sbjct: 610  HPVFHVSQLKPFKGTTQDQYLPLPLTMSEVGPIIQPVSILDARTIVRESQKVHQILIQWD 669

Query: 523  NMPREKATWEHVTELKMNFPTFNLEDKVVFNGDGDVM--------------GKIGNSNIV 386
                 + TWE   +L+  FPT NLEDK+VFNG+G VM                 G+ + +
Sbjct: 670  QTTPAETTWEDFDDLQNKFPTLNLEDKIVFNGEGIVMKPNITNLLEYDESAKSEGDPHNL 729

Query: 385  EESNAVGANLPRRGER 338
            +E+N+V +   R G R
Sbjct: 730  QENNSVSSGKERIGPR 745