BLASTX nr result

ID: Astragalus23_contig00013585 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00013585
         (758 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNY05166.1| pentatricopeptide repeat-containing protein at4g3...    60   9e-07
dbj|GAU18294.1| hypothetical protein TSUD_201820 [Trifolium subt...    59   2e-06
dbj|GAU11028.1| hypothetical protein TSUD_113210 [Trifolium subt...    56   7e-06
ref|XP_003610281.1| pentatricopeptide (PPR) repeat protein [Medi...    57   1e-05

>gb|PNY05166.1| pentatricopeptide repeat-containing protein at4g30700-like protein
           [Trifolium pratense]
          Length = 783

 Score = 60.5 bits (145), Expect = 9e-07
 Identities = 34/52 (65%), Positives = 39/52 (75%)
 Frame = -2

Query: 322 LFDGMPEGYCVVDSSTVDTAVLPAVAELQEMRVGMRIRCLALKIAFQSCEHV 167
           LF  M      +DSSTV TAVLPAVAELQE+RVGM I+CLALKI F  C++V
Sbjct: 196 LFGDMVAEGVRLDSSTV-TAVLPAVAELQELRVGMGIQCLALKIGFNRCDYV 246


>dbj|GAU18294.1| hypothetical protein TSUD_201820 [Trifolium subterraneum]
          Length = 448

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 33/52 (63%), Positives = 38/52 (73%)
 Frame = -2

Query: 322 LFDGMPEGYCVVDSSTVDTAVLPAVAELQEMRVGMRIRCLALKIAFQSCEHV 167
           LF  M      +DSS V TAVLPAVAELQE+RVGM I+CLALKI F  C++V
Sbjct: 196 LFGDMVAQGVKLDSSAV-TAVLPAVAELQELRVGMGIQCLALKIGFNRCDYV 246


>dbj|GAU11028.1| hypothetical protein TSUD_113210 [Trifolium subterraneum]
          Length = 186

 Score = 55.8 bits (133), Expect = 7e-06
 Identities = 34/58 (58%), Positives = 40/58 (68%)
 Frame = -2

Query: 289 VDSSTVDTAVLPAVAELQEMRVGMRIRCLALKIAFQSCEHVQGVTDVILLTLNTLKAE 116
           +DSSTV T VLPAVAELQE+RVGM I+CL LKI F  C +V       L  LN+L A+
Sbjct: 39  LDSSTV-TVVLPAVAELQELRVGMGIQCLTLKIGFNRCVYV-------LTGLNSLYAK 88


>ref|XP_003610281.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
 gb|AES92478.1| pentatricopeptide (PPR) repeat protein [Medicago truncatula]
          Length = 783

 Score = 57.4 bits (137), Expect = 1e-05
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -2

Query: 289 VDSSTVDTAVLPAVAELQEMRVGMRIRCLALKIAFQSCEHV 167
           VDSSTV TAVLPA AELQE++VGM I+CLALKI F  C++V
Sbjct: 207 VDSSTV-TAVLPAAAELQELKVGMGIQCLALKIGFGFCDYV 246


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