BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00012569
         (437 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PNX66256.1| ribonuclease H [Trifolium pratense]                     55   3e-06
gb|PNY05892.1| ribonuclease H [Trifolium pratense]                     55   8e-06

>gb|PNX66256.1| ribonuclease H [Trifolium pratense]
          Length = 175

 Score = 54.7 bits (130), Expect = 3e-06
 Identities = 37/120 (30%), Positives = 49/120 (40%), Gaps = 1/120 (0%)
 Frame = -3

Query: 435 IVVFNPGPSCVQCFTNEESAEHLFLCCCTSVLKWKLVEGWSGVEGGQFSGGWEHLRLHAC 256
           I+V +   SCV CF   E+  HLF  C   +  WK V  W GVE     GG +H  L   
Sbjct: 75  ILVNSHDLSCVFCFQAVENCHHLFFSCDKVIELWKQVFLWMGVEASLQVGGRQHFMLFGS 134

Query: 255 PMVGKRTRNSDXXXXXXXXXXXGYTEIRKVLEVVRQMLYQVKALAWSWFSNRVGS-SLPC 79
            +  K+   +D                         +L Q+K ++W WFS R G  S PC
Sbjct: 135 LVKSKKGAFADFSG----------------------LLDQIKFISWLWFSGRAGRLSTPC 172


>gb|PNY05892.1| ribonuclease H [Trifolium pratense]
          Length = 455

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/128 (25%), Positives = 47/128 (36%), Gaps = 4/128 (3%)
 Frame = -3

Query: 405 VQCFTNEESAEHLFLCCCTSVLKWKLVEGWSGVEGGQFSGGWEHLRLHACPMVGKRTRNS 226
           V CFT  E   HLF  C      W+ +  W G     +  GW+H       +  K+    
Sbjct: 327 VFCFTEIEDCMHLFFNCKLMQQVWRSIYKWLGCAYYNYGEGWKHFNFFGGIVKSKKGEKV 386

Query: 225 DXXXXXXXXXXXGYTE----IRKVLEVVRQMLYQVKALAWSWFSNRVGSSLPCNINFNSW 58
                                R  L    Q++ Q+K ++W WF  R G    C   ++ W
Sbjct: 387 KHLIWLVTTWCIWRLRNNIIFRGALADCAQLVDQIKLISWVWFIGRSGRH--CPYLYSDW 444

Query: 57  CDNPFDCM 34
           C NP +C+
Sbjct: 445 CVNPLECI 452