BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Astragalus23_contig00001341
         (1223 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006591962.1| PREDICTED: uncharacterized protein LOC100787...   275   3e-86
ref|XP_003534408.1| PREDICTED: uncharacterized protein LOC100817...   271   2e-85
gb|ACU24406.1| unknown [Glycine max]                                  270   7e-85
ref|XP_014619857.1| PREDICTED: uncharacterized protein LOC100787...   271   1e-84
gb|KHN11670.1| DNA-directed RNA polymerase III subunit RPC4 [Gly...   266   2e-83
gb|KHN32433.1| hypothetical protein glysoja_026327 [Glycine soja]     268   3e-83
gb|KYP67913.1| DNA-directed RNA polymerase III subunit RPC4, par...   258   2e-79
ref|XP_020214842.1| DNA-directed RNA polymerase III subunit rpc4...   255   6e-79
ref|XP_006587708.1| PREDICTED: uncharacterized protein LOC100817...   253   2e-78
ref|XP_007131354.1| hypothetical protein PHAVU_011G006800g [Phas...   249   2e-76
ref|XP_021593117.1| DNA-directed RNA polymerase III subunit rpc4...   247   1e-75
ref|XP_019412957.1| PREDICTED: uncharacterized protein LOC109325...   244   8e-75
gb|PON53135.1| DNA-directed RNA polymerase III subunit RPC [Trem...   240   7e-73
ref|XP_024173009.1| DNA-directed RNA polymerase III subunit rpc4...   240   8e-73
dbj|GAY62559.1| hypothetical protein CUMW_218780 [Citrus unshiu]      239   1e-72
ref|XP_006421620.1| DNA-directed RNA polymerase III subunit RPC4...   239   1e-72
gb|PON51041.1| DNA-directed RNA polymerase III subunit RPC [Para...   236   2e-71
ref|XP_016697164.1| PREDICTED: DNA-directed RNA polymerase III s...   235   3e-71
ref|XP_017640580.1| PREDICTED: DNA-directed RNA polymerase III s...   234   7e-71
ref|XP_012466685.1| PREDICTED: DNA-directed RNA polymerase III s...   232   4e-70

>ref|XP_006591962.1| PREDICTED: uncharacterized protein LOC100787575 isoform X1 [Glycine
            max]
 gb|KRH23819.1| hypothetical protein GLYMA_12G006000 [Glycine max]
          Length = 345

 Score =  275 bits (703), Expect = 3e-86
 Identities = 165/321 (51%), Positives = 200/321 (62%), Gaps = 27/321 (8%)
 Frame = -3

Query: 1179 CKAMDKDPNQTSPRRRTVRFKPRNPKPA--PKIETRDEQNDDNAENEALVRRMNENLARR 1006
            CKAMD  P+Q S + R ++FKPRN KP   PK E  D+Q +D+A   AL RR  EN  +R
Sbjct: 30   CKAMD--PDQGSSKARKLKFKPRNLKPVRTPKTEADDKQKEDSAVPRALSRRQ-ENPTKR 86

Query: 1005 EPKVERKSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXT---------------AIGDQSD 871
            EPKVE KSS +VAF  G SS+                +               A  DQ+ 
Sbjct: 87   EPKVETKSSVEVAFSLGSSSHSLRTYGISKSVDSGSPSKYFANEQIRSRHSSVATEDQNY 146

Query: 870  THMIDVTD-------ASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXX 712
              MI+VTD       ASA +I++ YKEPWDYE++ YPTTLP RKP SGDPEILD      
Sbjct: 147  ACMIEVTDDDDDTTDASARKIKREYKEPWDYENSYYPTTLPLRKPNSGDPEILDEKEFGE 206

Query: 711  XXXXXEYNENTINPAKELGLLDKSEKQRMFLVQLPPMPLLKQAMSIKGKEKIGTSTAQ-- 538
                 EY+ENT+N A ELGLL KS++QRM   + P +PL+KQ  + KGKEKIG ST    
Sbjct: 207  AASSAEYDENTVNSAAELGLLKKSQQQRMLFFKFPTLPLVKQ--TNKGKEKIGKSTVSQE 264

Query: 537  -PKLNNTLKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNF 361
              K  + L+E+P GYMGKMLVYKSGA+KLKLGET FDVSPGSN   VQD+VA++ AQK  
Sbjct: 265  ATKSKSALEELPRGYMGKMLVYKSGAIKLKLGETMFDVSPGSNSVSVQDIVAVNTAQKQC 324

Query: 360  CVLGPISKKAVVTPDLDSFEL 298
            C LG + K+ VV PDLDS EL
Sbjct: 325  CNLGELRKRVVVVPDLDSIEL 345


>ref|XP_003534408.1| PREDICTED: uncharacterized protein LOC100817982 isoform X1 [Glycine
            max]
 gb|KRH39967.1| hypothetical protein GLYMA_09G230700 [Glycine max]
          Length = 303

 Score =  271 bits (694), Expect = 2e-85
 Identities = 160/305 (52%), Positives = 196/305 (64%), Gaps = 17/305 (5%)
 Frame = -3

Query: 1161 DPNQTSPRRRTVRFKPRNPKP--APKIETRDEQNDDNAENEALVRRMNENLARREPKVER 988
            DP+Q + + R  +FKPRN K   APK E  D++N+D+    AL RR +EN A+REPKVER
Sbjct: 2    DPDQGTSKARKPKFKPRNLKAVRAPKTEADDKRNEDSEVPRALSRRRHENPAKREPKVER 61

Query: 987  KSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXTA-----------IGDQSDTHMIDVTDAS 841
            KSS +VAF  G SS                 ++           I   +     D ++AS
Sbjct: 62   KSSVEVAFSLGSSSSHSLRTYGTSKSIDSGTSSGSPSKYFANEQIRSIATEDQNDASNAS 121

Query: 840  AWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXXEYNENTINPAKE 661
            A +I++ YKEPWDYE++ YPTTLP RKP SGDPEILD           EY+ENT+N A E
Sbjct: 122  ARKIKREYKEPWDYENSYYPTTLPLRKPNSGDPEILDEKEFGEAATSVEYDENTVNSAAE 181

Query: 660  LGLLDKSEKQRMFLVQLP-PMPLLKQAMSIKGKEKIGTSTAQ---PKLNNTLKEMPGGYM 493
            L +L+ SE+QRMF  Q+P P+P+ KQ  S KGKEKIGTST      K  N L+E+P GYM
Sbjct: 182  LEILE-SEEQRMFFFQIPTPLPMDKQ--SNKGKEKIGTSTVSGEATKSKNALEELPRGYM 238

Query: 492  GKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVLGPISKKAVVTPDL 313
            GKMLVYKSGA+KLKLGET  DVSPGSNC  VQDV+A++ AQK  C LG ISK+ VV PDL
Sbjct: 239  GKMLVYKSGAIKLKLGETLLDVSPGSNCRCVQDVMAVNTAQKQCCNLGEISKRVVVVPDL 298

Query: 312  DSFEL 298
            DS EL
Sbjct: 299  DSIEL 303


>gb|ACU24406.1| unknown [Glycine max]
          Length = 303

 Score =  270 bits (690), Expect = 7e-85
 Identities = 159/305 (52%), Positives = 195/305 (63%), Gaps = 17/305 (5%)
 Frame = -3

Query: 1161 DPNQTSPRRRTVRFKPRNPKP--APKIETRDEQNDDNAENEALVRRMNENLARREPKVER 988
            DP+Q + + R  +FKPRN K   APK E  D++N+D+    AL RR +EN A+REPKVER
Sbjct: 2    DPDQGTSKARKPKFKPRNLKAVRAPKTEADDKRNEDSEVPRALSRRRHENPAKREPKVER 61

Query: 987  KSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXTA-----------IGDQSDTHMIDVTDAS 841
            KSS +VAF  G SS                 ++           I   +     D ++AS
Sbjct: 62   KSSVEVAFSLGSSSSHSLRTYGTSKSIDSGTSSGSPSKYFANEQIRSIATEDQNDASNAS 121

Query: 840  AWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXXEYNENTINPAKE 661
            A  I++ Y+EPWDYE++ YPTTLP RKP SGDPEILD           EY+ENT+N A E
Sbjct: 122  ARRIKREYREPWDYENSYYPTTLPLRKPNSGDPEILDEKEFGEAATSVEYDENTVNSAAE 181

Query: 660  LGLLDKSEKQRMFLVQLP-PMPLLKQAMSIKGKEKIGTSTAQ---PKLNNTLKEMPGGYM 493
            L +L+ SE+QRMF  Q+P P+P+ KQ  S KGKEKIGTST      K  N L+E+P GYM
Sbjct: 182  LEILE-SEEQRMFFFQIPTPLPMDKQ--SNKGKEKIGTSTVSGEATKSKNALEELPRGYM 238

Query: 492  GKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVLGPISKKAVVTPDL 313
            GKMLVYKSGA+KLKLGET  DVSPGSNC  VQDV+A++ AQK  C LG ISK+ VV PDL
Sbjct: 239  GKMLVYKSGAIKLKLGETLLDVSPGSNCRCVQDVMAVNTAQKQCCNLGEISKRVVVVPDL 298

Query: 312  DSFEL 298
            DS EL
Sbjct: 299  DSIEL 303


>ref|XP_014619857.1| PREDICTED: uncharacterized protein LOC100787575 isoform X2 [Glycine
            max]
          Length = 344

 Score =  271 bits (692), Expect = 1e-84
 Identities = 165/321 (51%), Positives = 199/321 (61%), Gaps = 27/321 (8%)
 Frame = -3

Query: 1179 CKAMDKDPNQTSPRRRTVRFKPRNPKPA--PKIETRDEQNDDNAENEALVRRMNENLARR 1006
            CKAMD  P+Q S + R ++FKPRN KP   PK E  D+Q +D+A   AL RR  EN  +R
Sbjct: 30   CKAMD--PDQGSSKARKLKFKPRNLKPVRTPKTEADDKQKEDSAVPRALSRRQ-ENPTKR 86

Query: 1005 EPKVERKSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXT---------------AIGDQSD 871
            EPKVE KSS +VAF  G SS+                +               A  DQ+ 
Sbjct: 87   EPKVETKSSVEVAFSLGSSSHSLRTYGISKSVDSGSPSKYFANEQIRSRHSSVATEDQNY 146

Query: 870  THMIDVTD-------ASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXX 712
              MI+VTD       ASA +I++ YKEPWDYE++ YPTTLP RKP SGDPEILD      
Sbjct: 147  ACMIEVTDDDDDTTDASARKIKREYKEPWDYENSYYPTTLPLRKPNSGDPEILDEKEFGE 206

Query: 711  XXXXXEYNENTINPAKELGLLDKSEKQRMFLVQLPPMPLLKQAMSIKGKEKIGTSTAQP- 535
                 EY+ENT+N A ELGLL KS++QRM   + P +PL+KQ    KGKEKIG ST    
Sbjct: 207  AASSAEYDENTVNSAAELGLL-KSQQQRMLFFKFPTLPLVKQTN--KGKEKIGKSTVSQE 263

Query: 534  --KLNNTLKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNF 361
              K  + L+E+P GYMGKMLVYKSGA+KLKLGET FDVSPGSN   VQD+VA++ AQK  
Sbjct: 264  ATKSKSALEELPRGYMGKMLVYKSGAIKLKLGETMFDVSPGSNSVSVQDIVAVNTAQKQC 323

Query: 360  CVLGPISKKAVVTPDLDSFEL 298
            C LG + K+ VV PDLDS EL
Sbjct: 324  CNLGELRKRVVVVPDLDSIEL 344


>gb|KHN11670.1| DNA-directed RNA polymerase III subunit RPC4 [Glycine soja]
          Length = 307

 Score =  266 bits (681), Expect = 2e-83
 Identities = 159/309 (51%), Positives = 195/309 (63%), Gaps = 21/309 (6%)
 Frame = -3

Query: 1161 DPNQTSPRRRTVRFKPRNPKP--APKIETRDEQNDDNAENEALVRRMNENLARREPKVER 988
            DP+Q + +    +FKPRN K   APK E  D++N+D+    AL RR +EN A+REPKVER
Sbjct: 2    DPDQGTSKAWKPKFKPRNLKAVRAPKTEADDKRNEDSEVPRALSRRRHENPAKREPKVER 61

Query: 987  KSSAQVAFGPGGSS------YXXXXXXXXXXXXXXXXTAIGDQ---------SDTHMIDV 853
            KSS +VAF  G SS      Y                    ++         +     D 
Sbjct: 62   KSSVEVAFSLGSSSSHSLRTYGTSKSIDSGTSSGSPSKYFANEQIRSRHSSVATEDQNDA 121

Query: 852  TDASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXXEYNENTIN 673
            ++ASA +I++ YKEPWDYE++ YPTTLP RKP SGDPEILD           EY+ENT+N
Sbjct: 122  SNASARKIKREYKEPWDYENSYYPTTLPLRKPNSGDPEILDEKEFGEAATSVEYDENTVN 181

Query: 672  PAKELGLLDKSEKQRMFLVQLP-PMPLLKQAMSIKGKEKIGTSTAQ---PKLNNTLKEMP 505
             A EL +L+ SE+QRMF  Q+P P+P+ KQ  S KGKEKIGTST      K  N L+E+P
Sbjct: 182  SAAELEILE-SEEQRMFFFQIPTPLPMDKQ--SNKGKEKIGTSTVSGEATKSKNALEELP 238

Query: 504  GGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVLGPISKKAVV 325
             GYMGKMLVYKSGA+KLKLGET  DVSPGSNC  VQDV+A++ AQK  C LG ISK+ VV
Sbjct: 239  RGYMGKMLVYKSGAIKLKLGETLLDVSPGSNCRCVQDVMAVNTAQKQCCNLGEISKRVVV 298

Query: 324  TPDLDSFEL 298
             PDLDS EL
Sbjct: 299  VPDLDSIEL 307


>gb|KHN32433.1| hypothetical protein glysoja_026327 [Glycine soja]
          Length = 353

 Score =  268 bits (684), Expect = 3e-83
 Identities = 165/329 (50%), Positives = 200/329 (60%), Gaps = 35/329 (10%)
 Frame = -3

Query: 1179 CKAMDKDPNQTSPRRRTVRFKPRNPKPA--PKIETRDEQNDDNAENEALVRRMNENLARR 1006
            CKAMD  P+Q S + R ++FKPRN KP   PK E  D+Q +D+A   AL RR  EN  +R
Sbjct: 30   CKAMD--PDQGSSKARKLKFKPRNLKPVRTPKTEADDKQKEDSAVPRALSRRQ-ENPTKR 86

Query: 1005 EPKVERK--------SSAQVAFGPGGSSYXXXXXXXXXXXXXXXXT-------------- 892
            EPKVE K        SS +VAF  G SS+                +              
Sbjct: 87   EPKVETKCKFSLVFGSSVEVAFSLGSSSHSLRTYGISKSVDSGSPSKYFANEQIRSRHSS 146

Query: 891  -AIGDQSDTHMIDVTD-------ASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEI 736
             A  DQ+   MI+VTD       ASA +I++ YKEPWDYE++ YPTTLP RKP SGDPEI
Sbjct: 147  VATEDQNYACMIEVTDDDDDTTDASARKIKREYKEPWDYENSYYPTTLPLRKPNSGDPEI 206

Query: 735  LDXXXXXXXXXXXEYNENTINPAKELGLLDKSEKQRMFLVQLPPMPLLKQAMSIKGKEKI 556
            LD           EY+ENT+N A ELGLL KS++QRM   + P +PL+KQ  + KGKEKI
Sbjct: 207  LDEKEFGEAASSAEYDENTVNSAAELGLLKKSQQQRMLFFKFPTLPLVKQ--TNKGKEKI 264

Query: 555  GTSTAQ---PKLNNTLKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVA 385
            G ST      K  + L+E+P GYMGKMLVYKSGA+KLKLGET FDVSPGSN   VQD+VA
Sbjct: 265  GKSTVSQEATKSKSALEELPRGYMGKMLVYKSGAIKLKLGETMFDVSPGSNSVSVQDIVA 324

Query: 384  IDKAQKNFCVLGPISKKAVVTPDLDSFEL 298
            ++ AQK  C LG + K+ VV PDLDS EL
Sbjct: 325  VNTAQKQCCNLGELRKRVVVVPDLDSIEL 353


>gb|KYP67913.1| DNA-directed RNA polymerase III subunit RPC4, partial [Cajanus cajan]
          Length = 345

 Score =  258 bits (658), Expect = 2e-79
 Identities = 161/324 (49%), Positives = 199/324 (61%), Gaps = 30/324 (9%)
 Frame = -3

Query: 1179 CKAMDKDPNQTSPRRRTVRFKPRNP-KPA---PKIETRDEQNDDNAENEALVRRMNENLA 1012
            C+AMD  P+Q S R R +++ P+ P KP    PK E  D+Q +D+A+  +L+RR  E+LA
Sbjct: 27   CEAMD--PDQVSSRTRKLKYPPKPPPKPKLRKPKAEANDKQKEDSAQARSLLRRC-ESLA 83

Query: 1011 RREPKVERKSSAQVAFGPGGSS-----YXXXXXXXXXXXXXXXXTAIG-------DQSDT 868
            R EPKVERKSSA+VAF P  SS     Y                  I        DQ+D 
Sbjct: 84   RPEPKVERKSSAEVAFSPAVSSPSLRTYGTSNGSPSKHFSNEQTLLIRSSAATEEDQNDF 143

Query: 867  HMIDVTD---------ASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXX 715
             MIDVTD         ASA   +  YKE WDY+H+ YPTTLP RKP SGDPEILD     
Sbjct: 144  RMIDVTDDATNASATNASATRNKGEYKELWDYDHSYYPTTLPLRKPNSGDPEILDEEEFG 203

Query: 714  XXXXXXEYNENTINPAKELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTSTAQ 538
                  EY+EN +N A ELGLL+KSE+Q M   + P  +PL KQ  + KGKEKIGTST  
Sbjct: 204  EAAASVEYDENAVNSAAELGLLEKSEQQTMLFFKFPAALPLEKQ--NNKGKEKIGTSTVT 261

Query: 537  PKLNNT----LKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQ 370
             +   +    L+E+P G+MGKMLVYKSGA+KLKLGET FDVS G+NC F QD+VA++ AQ
Sbjct: 262  GEPTKSKGIALEELPRGHMGKMLVYKSGAIKLKLGETLFDVSSGTNCVFAQDIVAMNAAQ 321

Query: 369  KNFCVLGPISKKAVVTPDLDSFEL 298
            K  C L  I+K+ VV PDLDS +L
Sbjct: 322  KQCCNLSKINKRVVVVPDLDSIDL 345


>ref|XP_020214842.1| DNA-directed RNA polymerase III subunit rpc4-like [Cajanus cajan]
          Length = 316

 Score =  255 bits (652), Expect = 6e-79
 Identities = 158/318 (49%), Positives = 195/318 (61%), Gaps = 30/318 (9%)
 Frame = -3

Query: 1161 DPNQTSPRRRTVRFKPRNP-KPA---PKIETRDEQNDDNAENEALVRRMNENLARREPKV 994
            DP+Q S R R +++ P+ P KP    PK E  D+Q +D+A+  +L+RR  E+LAR EPKV
Sbjct: 2    DPDQVSSRTRKLKYPPKPPPKPKLRKPKAEANDKQKEDSAQARSLLRRC-ESLARPEPKV 60

Query: 993  ERKSSAQVAFGPGGSS-----YXXXXXXXXXXXXXXXXTAIG-------DQSDTHMIDVT 850
            ERKSSA+VAF P  SS     Y                  I        DQ+D  MIDVT
Sbjct: 61   ERKSSAEVAFSPAVSSPSLRTYGTSNGSPSKHFSNEQTLLIRSSAATEEDQNDFRMIDVT 120

Query: 849  D---------ASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXX 697
            D         ASA   +  YKE WDY+H+ YPTTLP RKP SGDPEILD           
Sbjct: 121  DDATNASATNASATRNKGEYKELWDYDHSYYPTTLPLRKPNSGDPEILDEEEFGEAAASV 180

Query: 696  EYNENTINPAKELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTSTAQPKLNNT 520
            EY+EN +N A ELGLL+KSE+Q M   + P  +PL KQ  + KGKEKIGTST   +   +
Sbjct: 181  EYDENAVNSAAELGLLEKSEQQTMLFFKFPAALPLEKQ--NNKGKEKIGTSTVTGEPTKS 238

Query: 519  ----LKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVL 352
                L+E+P G+MGKMLVYKSGA+KLKLGET FDVS G+NC F QD+VA++ AQK  C L
Sbjct: 239  KGIALEELPRGHMGKMLVYKSGAIKLKLGETLFDVSSGTNCVFAQDIVAMNAAQKQCCNL 298

Query: 351  GPISKKAVVTPDLDSFEL 298
              I+K+ VV PDLDS +L
Sbjct: 299  SKINKRVVVVPDLDSIDL 316


>ref|XP_006587708.1| PREDICTED: uncharacterized protein LOC100817982 isoform X2 [Glycine
            max]
 gb|KRH39966.1| hypothetical protein GLYMA_09G230700 [Glycine max]
          Length = 292

 Score =  253 bits (647), Expect = 2e-78
 Identities = 152/304 (50%), Positives = 186/304 (61%), Gaps = 16/304 (5%)
 Frame = -3

Query: 1161 DPNQTSPRRRTVRFKPRNPKP--APKIETRDEQNDDNAENEALVRRMNENLARREPKVER 988
            DP+Q + + R  +FKPRN K   APK E  D++N+D+    AL RR +EN A+REPKVER
Sbjct: 2    DPDQGTSKARKPKFKPRNLKAVRAPKTEADDKRNEDSEVPRALSRRRHENPAKREPKVER 61

Query: 987  KSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXTA-----------IGDQSDTHMIDVTDAS 841
            KSS +VAF  G SS                 ++           I   +     D ++AS
Sbjct: 62   KSSVEVAFSLGSSSSHSLRTYGTSKSIDSGTSSGSPSKYFANEQIRSIATEDQNDASNAS 121

Query: 840  AWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXXEYNENTINPAKE 661
            A +I++ YKEPWDYE++ YPTTLP RKP SGDPEILD           EY+ENT+N A E
Sbjct: 122  ARKIKREYKEPWDYENSYYPTTLPLRKPNSGDPEILDEKEFGEAATSVEYDENTVNSAAE 181

Query: 660  LGLLDKSEKQRMFLVQLPPMPLLKQAMSIKGKEKIGTSTAQ---PKLNNTLKEMPGGYMG 490
            L +L  +           P+P+ KQ  S KGKEKIGTST      K  N L+E+P GYMG
Sbjct: 182  LEILIPT-----------PLPMDKQ--SNKGKEKIGTSTVSGEATKSKNALEELPRGYMG 228

Query: 489  KMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVLGPISKKAVVTPDLD 310
            KMLVYKSGA+KLKLGET  DVSPGSNC  VQDV+A++ AQK  C LG ISK+ VV PDLD
Sbjct: 229  KMLVYKSGAIKLKLGETLLDVSPGSNCRCVQDVMAVNTAQKQCCNLGEISKRVVVVPDLD 288

Query: 309  SFEL 298
            S EL
Sbjct: 289  SIEL 292


>ref|XP_007131354.1| hypothetical protein PHAVU_011G006800g [Phaseolus vulgaris]
 gb|ESW03348.1| hypothetical protein PHAVU_011G006800g [Phaseolus vulgaris]
          Length = 318

 Score =  249 bits (635), Expect = 2e-76
 Identities = 150/312 (48%), Positives = 185/312 (59%), Gaps = 25/312 (8%)
 Frame = -3

Query: 1161 DPNQTSPRRRTVRFKPRNPKP-APKIETRDEQNDDNAENEALVRRMNENLARREPKVERK 985
            DP+Q S R R  +F PR PKP APK E  D+Q++D+A    L RR  EN ARREPKVE K
Sbjct: 2    DPDQGSSRTRKHKFTPRPPKPHAPKTEKDDKQDEDSAPARLLSRRY-ENSARREPKVETK 60

Query: 984  SSAQVAFGPGGSSYXXXXXXXXXXXXXXXXT-------------------AIGDQSDTHM 862
            SS +VAF PG SS                 +                   A GDQ+DT  
Sbjct: 61   SSVEVAFSPGVSSTSLRTYGTSKAVDNGTNSGSPSKSFAKEQIRSRRSSAATGDQNDTST 120

Query: 861  IDVTD----ASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXXE 694
            IDVTD     +A +I++ YKEPWDY ++ YP TLP RKP SG+PEILD           +
Sbjct: 121  IDVTDNTTNETARKIKREYKEPWDYTNSYYPITLPLRKPNSGNPEILDEEEFGEAATSSK 180

Query: 693  YNENTINPAKELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTSTAQPKLNNTL 517
            Y+EN +N A EL LL+KSE+ +MFL Q P   P      S K K +IG +T   K    L
Sbjct: 181  YDENAVNSAAELKLLEKSEQHKMFLFQFPKNFPF--NVGSNKEKGQIGATTVSGKAG-AL 237

Query: 516  KEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVLGPISK 337
            +E+P GYMGKM +YKSGA+KLKLGET FDVSPG+ C F QDVVA++ AQK  C LG ++ 
Sbjct: 238  EELPSGYMGKMQIYKSGAIKLKLGETLFDVSPGTKCGFSQDVVAVNIAQKQICNLGEVNH 297

Query: 336  KAVVTPDLDSFE 301
            K VV P+LDS +
Sbjct: 298  KVVVVPELDSID 309


>ref|XP_021593117.1| DNA-directed RNA polymerase III subunit rpc4-like [Manihot esculenta]
 gb|OAY30523.1| hypothetical protein MANES_14G037500 [Manihot esculenta]
          Length = 327

 Score =  247 bits (631), Expect = 1e-75
 Identities = 139/314 (44%), Positives = 186/314 (59%), Gaps = 32/314 (10%)
 Frame = -3

Query: 1152 QTSPRRRTVRFKPRNPKP---APKIETR--DEQNDDNAENEALVRRMNENLARREPKVER 988
            Q SP RR V+F P+  KP    PK E    D Q D+ A+ + L+ +  +NL R+ PKVE+
Sbjct: 5    QPSPVRRKVKFIPKGRKPKATVPKSEVNYNDNQEDEVAQAQKLMTKFRDNLTRQVPKVEK 64

Query: 987  KSSAQVAFGPGG--SSYXXXXXXXXXXXXXXXXTAIGDQSDTH----------------- 865
            +SS QVAFGPG   SS                 + I D  D                   
Sbjct: 65   QSSVQVAFGPGATSSSIRTYGVPGGENAGRCSRSQIKDSIDDDGKIISSSLSTVKEDRTI 124

Query: 864  --MIDVTDASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXXEY 691
              + D  DA   + +K+++EPWDY+HT YPTTLP R+P+SGDPEILD            Y
Sbjct: 125  DSLPDAADALPLKTKKAFREPWDYDHTYYPTTLPLRRPHSGDPEILDEAEFGDAARKLVY 184

Query: 690  NENTINPAKELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTSTAQP-----KL 529
            +E TINPA +LGLL++ +K++M   QLP  +P  K++ ++KGKEK   +T        K 
Sbjct: 185  DEKTINPASDLGLLEECDKEKMLFFQLPAKLPHFKRSATVKGKEKAEDATPSQGKGVSKK 244

Query: 528  NNTLKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVLG 349
             + L+E+PGGYMGKMLVY+SGAVKLKLG+T +DVSPG +C F QDV+AI  A K+ C +G
Sbjct: 245  ESNLEELPGGYMGKMLVYRSGAVKLKLGDTLYDVSPGEDCKFAQDVMAIKNAAKHCCAIG 304

Query: 348  PISKKAVVTPDLDS 307
             + K+AVVTPD+DS
Sbjct: 305  ELGKRAVVTPDVDS 318


>ref|XP_019412957.1| PREDICTED: uncharacterized protein LOC109325211 [Lupinus
            angustifolius]
 gb|OIV99693.1| hypothetical protein TanjilG_17503 [Lupinus angustifolius]
          Length = 311

 Score =  244 bits (624), Expect = 8e-75
 Identities = 145/307 (47%), Positives = 181/307 (58%), Gaps = 22/307 (7%)
 Frame = -3

Query: 1155 NQTSPRRRTVRFKP-----RNPKPAPKIETRDEQNDDNAENEALVRRMNENLARREPKVE 991
            + +S   R ++F P     RNPKP P    +  + DDN E     RR   +L R EPKVE
Sbjct: 8    SSSSSSGRKLKFTPKPPRKRNPKPLPN--PKPYETDDNDE-----RRGWNDLRRCEPKVE 60

Query: 990  RKSSAQVAFGPGGS-------------SYXXXXXXXXXXXXXXXXTAIGDQSDTHMIDVT 850
            R SS QVAFGP  S                               T++ DQ DT MID  
Sbjct: 61   RNSSVQVAFGPASSPNLGTYKGSGKRSGSASKHFASQENSLECSITSVEDQIDTCMIDTP 120

Query: 849  D----ASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXXEYNEN 682
            D    AS  +I+K Y+EPW+Y+H+ YPTTLP RKPYSGDPEILD            Y+E+
Sbjct: 121  DDTTKASVPKIKKEYQEPWNYQHSYYPTTLPLRKPYSGDPEILDKEEFGDAASNVMYDES 180

Query: 681  TINPAKELGLLDKSEKQRMFLVQLPPMPLLKQAMSIKGKEKIGTSTAQPKLNNTLKEMPG 502
            TINPA E GLL+KSE+ RM L +LPP+P +KQ  + KG+EK+G  + +       +++P 
Sbjct: 181  TINPAAEFGLLEKSEEPRMLLFKLPPLPFVKQPATKKGEEKVG--SGESTKGGPWEDLPE 238

Query: 501  GYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVLGPISKKAVVT 322
            G+MGKMLVYKSGAVK KLG+   DVSPG      QDVVA++ AQK+ CV+G I K AVVT
Sbjct: 239  GFMGKMLVYKSGAVKFKLGQILLDVSPGPKSEMPQDVVAMNTAQKHCCVIGQIRKMAVVT 298

Query: 321  PDLDSFE 301
            PDLDSFE
Sbjct: 299  PDLDSFE 305


>gb|PON53135.1| DNA-directed RNA polymerase III subunit RPC [Trema orientalis]
          Length = 323

 Score =  240 bits (612), Expect = 7e-73
 Identities = 144/318 (45%), Positives = 192/318 (60%), Gaps = 30/318 (9%)
 Frame = -3

Query: 1170 MDKDPNQTSPRRRTVRFKPRNP------KPAPKIETRDEQNDDNAEN-EALVRRMNENLA 1012
            M +D   +SPR+  VRF P+ P         PKIE  DE +DD A   + L+R+ NENL 
Sbjct: 1    MKQDGTVSSPRK--VRFAPKAPARRKFNSNPPKIELSDEDDDDGASQAQNLLRQFNENLT 58

Query: 1011 RREPKVERKSSAQVAFGPG---------------GSSYXXXXXXXXXXXXXXXXTAIGDQ 877
            RR PK ERK  AQVAFGPG               G+S                     + 
Sbjct: 59   RRGPKAERK--AQVAFGPGASSSSIRSYGVPKDGGTSQSSNLDLKGSDHGQIPLPLTSEN 116

Query: 876  SDT--HMIDVTDASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXX 703
            SDT   + D T+ S    +K Y+EPWDY HT+YPT LP R+PYSGDPE+L+         
Sbjct: 117  SDTVASVRDSTNVSTRIGKKEYREPWDYRHTNYPTILPLRRPYSGDPELLNAVEFGEAAT 176

Query: 702  XXEYNENTINPAKELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTSTAQPKLN 526
              EY+E+  N A ELGLL+++ +  MF  QLPP +PL+K++ SIKGKEKIG+ST+    +
Sbjct: 177  TKEYDEDATNSASELGLLNENAEGNMFCFQLPPILPLVKRSASIKGKEKIGSSTSSQNPS 236

Query: 525  -----NTLKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNF 361
                 + L+E+P G++GKMLVYKSGAVKLKLG+  +DVSPG++  F QDVVAI+ A+K  
Sbjct: 237  ASSKGHKLEELPEGHVGKMLVYKSGAVKLKLGDILYDVSPGTDFVFAQDVVAINTAEKQC 296

Query: 360  CVLGPISKKAVVTPDLDS 307
            C+LG + K+AV++PD+ S
Sbjct: 297  CLLGELPKRAVISPDVSS 314


>ref|XP_024173009.1| DNA-directed RNA polymerase III subunit rpc4-like [Rosa chinensis]
 gb|PRQ59785.1| putative DNA-directed RNA polymerase III subunit RPC4 [Rosa
            chinensis]
          Length = 325

 Score =  240 bits (612), Expect = 8e-73
 Identities = 139/316 (43%), Positives = 187/316 (59%), Gaps = 31/316 (9%)
 Frame = -3

Query: 1161 DPNQTSPRRRTVRFKPRNP--KPAPKIETRDEQNDDNAENEA--LVRRMNENLARREPKV 994
            D N++S  RR  RFKP+    KP P + T + ++ +  E EA  L+R+  E  ARR PK 
Sbjct: 2    DKNESSAPRRKGRFKPKAQPRKPKPTVLTTEVEDAEKEEREAKALLRKFQEKQARRAPKA 61

Query: 993  ERKSSAQVAFGPG--------------------GSSYXXXXXXXXXXXXXXXXTAIGDQS 874
            E+KS+ QVAFGPG                    GSS                    G  +
Sbjct: 62   EKKSTVQVAFGPGAASSSSLRTYGVPKVENLDQGSSLGVKGSDNDQILSPSPLATSGAGT 121

Query: 873  DTHM-IDVTDASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXX 697
            D  M ID+ DAS   ++  Y E WDYE++ YPTTLP RKPYSGDP+IL+           
Sbjct: 122  DAPMDIDIADASISNVKNQYIEIWDYENSKYPTTLPLRKPYSGDPDILNEKEFVEDAAKE 181

Query: 696  EYNENTINPAKELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTSTAQPKLN-- 526
             Y+E+TIN A ELGLL+++ K+++  VQLPP +PL+K+  S KGKE++G+S    K+   
Sbjct: 182  -YDESTINCASELGLLEQNAKEKLLFVQLPPTLPLVKRPTSAKGKERVGSSAPSEKVGAA 240

Query: 525  ---NTLKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCV 355
                +L+E+  GYMGKMLVYKSGAVK KLG+  +DVSPGS+C F QDV AI+ A +  CV
Sbjct: 241  NKGGSLEELSEGYMGKMLVYKSGAVKFKLGDALYDVSPGSDCIFAQDVAAINTAARKCCV 300

Query: 354  LGPISKKAVVTPDLDS 307
            LG + ++ V+TPD+DS
Sbjct: 301  LGELGQRVVITPDVDS 316


>dbj|GAY62559.1| hypothetical protein CUMW_218780 [Citrus unshiu]
          Length = 324

 Score =  239 bits (611), Expect = 1e-72
 Identities = 148/324 (45%), Positives = 191/324 (58%), Gaps = 35/324 (10%)
 Frame = -3

Query: 1170 MDKDPNQTSPRRRTVRFKPRNPKPA--PKIET-------RDEQNDDNAENEALVRRMNEN 1018
            MD+DP++ S   R VRF P+ P P+  PK+           +  D  AE + L+R+ NE 
Sbjct: 1    MDQDPDKPSGSGRKVRFAPKAPPPSRQPKVTAPTPVPRPESKHEDPEAEAQRLLRQFNEA 60

Query: 1017 LARREPKVERKSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXTAIGDQSDT-----HMIDV 853
             ARR PKVE+KSS QVAFG G SS                     +  D+      +++ 
Sbjct: 61   NARRRPKVEKKSS-QVAFGAGDSSSPSIKSFGPRREVSSAKGTESEIIDSTSDERQIVNF 119

Query: 852  TDASAWE---------------IEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXX 718
            + A+A E               I++ YKEPW+Y+ T YPTTLPWRKP SGDPE+LD    
Sbjct: 120  SPATAREDRSAPISSDASSTQKIKEDYKEPWNYD-TYYPTTLPWRKPNSGDPEVLDQDEF 178

Query: 717  XXXXXXXEYNENTINPAKELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTS-- 547
                   EY+EN++N A +LGLLD+SE +++F  QLP  +PL K+  S KGKEK  +S  
Sbjct: 179  GENTRNSEYDENSVNSAADLGLLDESENRKLFFFQLPKKLPLDKRPASTKGKEKAESSKP 238

Query: 546  ---TAQPKLNNTLKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDK 376
               T  PK +  L ++PGGYMGKMLVYKSGAVK KLG+T FDVS GS+CSF QD+V ID 
Sbjct: 239  LGRTDAPK-DLDLSKLPGGYMGKMLVYKSGAVKFKLGDTLFDVSAGSDCSFAQDLVVIDV 297

Query: 375  AQKNFCVLGPISKKAVVTPDLDSF 304
              K  CVLG + K AVV+PD+DSF
Sbjct: 298  KDKTCCVLGQLDKLAVVSPDIDSF 321


>ref|XP_006421620.1| DNA-directed RNA polymerase III subunit RPC4 isoform X1 [Citrus
            clementina]
 gb|ESR34860.1| hypothetical protein CICLE_v10005426mg [Citrus clementina]
          Length = 324

 Score =  239 bits (611), Expect = 1e-72
 Identities = 148/324 (45%), Positives = 191/324 (58%), Gaps = 35/324 (10%)
 Frame = -3

Query: 1170 MDKDPNQTSPRRRTVRFKPRNPKPA--PKIET-------RDEQNDDNAENEALVRRMNEN 1018
            MD+DP++ S   R VRF P+ P P+  PK+           +  D  AE + L+R+ NE 
Sbjct: 1    MDQDPDKPSGSGRKVRFAPKAPPPSRQPKVTAPTPVPRPESKHEDPEAEAQRLLRQFNEA 60

Query: 1017 LARREPKVERKSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXTAIGDQSDT-----HMIDV 853
             ARR PKVE+KSS QVAFG G SS                     +  D+      +++ 
Sbjct: 61   NARRRPKVEKKSS-QVAFGAGDSSSPSIKSFGPRREVSSAKGTESEIIDSTSDERQIVNF 119

Query: 852  TDASAWE---------------IEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXX 718
            + A+A E               I++ YKEPW+Y+ T YPTTLPWRKP SGDPE+LD    
Sbjct: 120  SPATAREDRSAPISSDASSTQKIKEDYKEPWNYD-TYYPTTLPWRKPNSGDPEVLDQEEF 178

Query: 717  XXXXXXXEYNENTINPAKELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTS-- 547
                   EY+EN++N A +LGLLD+SE +++F  QLP  +PL K+  S KGKEK  +S  
Sbjct: 179  GENTRNSEYDENSVNSAADLGLLDESENRKLFFFQLPKKLPLDKRPASTKGKEKAESSKP 238

Query: 546  ---TAQPKLNNTLKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDK 376
               T  PK +  L ++PGGYMGKMLVYKSGAVK KLG+T FDVS GS+CSF QD+V ID 
Sbjct: 239  LGRTDAPK-DLDLSKLPGGYMGKMLVYKSGAVKFKLGDTLFDVSAGSDCSFAQDLVVIDV 297

Query: 375  AQKNFCVLGPISKKAVVTPDLDSF 304
              K  CVLG + K AVV+PD+DSF
Sbjct: 298  KDKTCCVLGQLDKLAVVSPDIDSF 321


>gb|PON51041.1| DNA-directed RNA polymerase III subunit RPC [Parasponia andersonii]
          Length = 323

 Score =  236 bits (602), Expect = 2e-71
 Identities = 143/318 (44%), Positives = 192/318 (60%), Gaps = 30/318 (9%)
 Frame = -3

Query: 1170 MDKDPNQTSPRRRTVRFKPRNP------KPAPKIETRDEQNDDNAEN-EALVRRMNENLA 1012
            M +D   +SPR+  VRF P+ P         PKIE  DE +DD A   + L+R+ NENL 
Sbjct: 1    MKQDGTVSSPRK--VRFAPKAPARRKFKSNPPKIELSDEDDDDGASQAQNLLRQFNENLT 58

Query: 1011 RREPKVERKSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXTAIG---------------DQ 877
            RR PK ERK  A+VAFGPG SS                 + +                + 
Sbjct: 59   RRGPKAERK--ARVAFGPGASSSSIRSYGVPKDGGPSQSSNLDLKGSDHGQIPLPLTLEN 116

Query: 876  SDT--HMIDVTDASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXX 703
            SDT   + D T+ S    +K Y+EPWDY HT+YPT LP R+PYS DPE+L+         
Sbjct: 117  SDTVASVRDSTNVSTRIGKKEYREPWDYRHTNYPTILPLRRPYSRDPELLNAVEFGEAAT 176

Query: 702  XXEYNENTINPAKELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTSTAQPKLN 526
              EY+E+  N A ELGLL+++ +  MF  QLPP +PL+K++ SIKGKEKIG+ST+    N
Sbjct: 177  TKEYDEDATNSASELGLLNENAEGNMFCFQLPPILPLVKRSASIKGKEKIGSSTSSQNPN 236

Query: 525  -----NTLKEMPGGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNF 361
                 + L+E+P G++GKMLVYKSGAVKLKLG+  +DVSPG++  F QDVVAI+ A+K  
Sbjct: 237  ASSKGHKLEELPEGHVGKMLVYKSGAVKLKLGDILYDVSPGTDFVFAQDVVAINTAEKQC 296

Query: 360  CVLGPISKKAVVTPDLDS 307
            C+LG + K+AV++PD+ S
Sbjct: 297  CLLGELPKRAVISPDVSS 314


>ref|XP_016697164.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4-like isoform
            X1 [Gossypium hirsutum]
          Length = 302

 Score =  235 bits (599), Expect = 3e-71
 Identities = 138/303 (45%), Positives = 178/303 (58%), Gaps = 21/303 (6%)
 Frame = -3

Query: 1161 DPNQTSPRRRTVRFKPRNPKPA--PKI-----ETRDEQNDDNAENEALVRRMNENLARRE 1003
            D +  S  RR VRF P+ P+ +  PK+     ET DE +++ A+ + L+ R NENL R++
Sbjct: 2    DVDGPSSGRRKVRFAPKAPQSSRKPKLAVAKSETSDE-DEEAAQAQYLLGRFNENLTRQK 60

Query: 1002 PKVERKSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXTAIGDQSDTHMIDVTD-------- 847
            PKVE+KSS Q+AFGPG  S                   + D S T   D TD        
Sbjct: 61   PKVEKKSSVQIAFGPGAPS----STSLRSYGNKRAGRILDDSSSTSKEDCTDICSSDAIE 116

Query: 846  ASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXXEYNENTINPA 667
            A A  ++  Y+EPWDY  T YPTTLP R+PYSGDPE+LD            Y+E TINPA
Sbjct: 117  APAPRVKSEYREPWDYNRTYYPTTLPLRRPYSGDPELLDEAEFVETAKKE-YDETTINPA 175

Query: 666  KELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTSTAQPKLNNT-----LKEMP 505
             +LGLL + +KQ+M   Q P  +P +KQ +S KGKEK   S +  +         L+E+P
Sbjct: 176  SDLGLLQEGDKQKMLFFQFPGNLPRIKQPVSKKGKEKAEHSVSSDRFGALKKGCRLEELP 235

Query: 504  GGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVLGPISKKAVV 325
             GY+GKMLVYKSGAVKLK+GET FDVSPG  C F QDV A + A K  CV+G + ++ VV
Sbjct: 236  EGYVGKMLVYKSGAVKLKIGETLFDVSPGEACVFAQDVAAFNTASKQCCVIGEVGQRVVV 295

Query: 324  TPD 316
            TPD
Sbjct: 296  TPD 298


>ref|XP_017640580.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC4 isoform X1
            [Gossypium arboreum]
 gb|KHG22798.1| DNA-directed RNA polymerase III subunit RPC4 [Gossypium arboreum]
          Length = 302

 Score =  234 bits (597), Expect = 7e-71
 Identities = 138/303 (45%), Positives = 178/303 (58%), Gaps = 21/303 (6%)
 Frame = -3

Query: 1161 DPNQTSPRRRTVRFKPRNPKPA--PKI-----ETRDEQNDDNAENEALVRRMNENLARRE 1003
            D +  S  RR VRF P+ P+ +  PK+     ET DE +++ A+ + L+ R NENL R++
Sbjct: 2    DVDGPSSGRRKVRFAPKAPQSSRKPKLAVAKSETSDE-DEEAAQAQYLLGRFNENLTRQK 60

Query: 1002 PKVERKSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXTAIGDQSDTHMIDVTD-------- 847
            PKVE+KSS Q+AFGPG  S                   + D S T   D TD        
Sbjct: 61   PKVEKKSSVQIAFGPGAPS----STSLRSYGNKRAGRILDDSSSTSKEDCTDICSSDAIE 116

Query: 846  ASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXXEYNENTINPA 667
            A A  ++  Y+EPWDY  T YPTTLP R+PYSGDPE+LD            Y+E TINPA
Sbjct: 117  APAPRVKSEYREPWDYNRTYYPTTLPLRRPYSGDPELLDEAEFVETAKKE-YDEATINPA 175

Query: 666  KELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTSTAQPKLNNT-----LKEMP 505
             +LGLL + +KQ+M   Q P  +P +KQ +S KGKEK   S +  +         L+E+P
Sbjct: 176  SDLGLLQEGDKQKMLFFQFPGNLPRIKQPVSKKGKEKAEHSVSSDRFGALKKGCRLEELP 235

Query: 504  GGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVLGPISKKAVV 325
             GY+GKMLVYKSGAVKLK+GET FDVSPG  C F QDV A + A K  CV+G + ++ VV
Sbjct: 236  EGYVGKMLVYKSGAVKLKIGETLFDVSPGEACVFAQDVAAFNTASKQCCVIGEVGQRVVV 295

Query: 324  TPD 316
            TPD
Sbjct: 296  TPD 298


>ref|XP_012466685.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc4 isoform X1
            [Gossypium raimondii]
 gb|KJB07872.1| hypothetical protein B456_001G049700 [Gossypium raimondii]
          Length = 302

 Score =  232 bits (592), Expect = 4e-70
 Identities = 136/303 (44%), Positives = 178/303 (58%), Gaps = 21/303 (6%)
 Frame = -3

Query: 1161 DPNQTSPRRRTVRFKPRNPKPA--PKI-----ETRDEQNDDNAENEALVRRMNENLARRE 1003
            D +  S  RR VRF P+ P+ +  PK+     ET DE +++ A+ + L+ R NENL R++
Sbjct: 2    DVDGPSSGRRKVRFAPKAPQSSRKPKLAVAKSETSDE-DEEAAQAQYLLGRFNENLTRQK 60

Query: 1002 PKVERKSSAQVAFGPGGSSYXXXXXXXXXXXXXXXXTAIGDQSDTHMIDVTD-------- 847
            PKVE+KSS Q+AFGPG  S                   + D S T   D TD        
Sbjct: 61   PKVEKKSSVQIAFGPGAPS----STSLRSYGNKRAGRILDDSSSTSKEDCTDICSSDAIE 116

Query: 846  ASAWEIEKSYKEPWDYEHTDYPTTLPWRKPYSGDPEILDXXXXXXXXXXXEYNENTINPA 667
            A A  ++  Y+EPWDY  T YPTTLP R+PYSGDPE+LD            Y+E TINPA
Sbjct: 117  APAPRVKSEYREPWDYNRTYYPTTLPLRRPYSGDPELLDEAEFVETAKKE-YDETTINPA 175

Query: 666  KELGLLDKSEKQRMFLVQLPP-MPLLKQAMSIKGKEKIGTSTAQPKLNNT-----LKEMP 505
             +LGLL++ +KQ+M   Q P  +P +KQ +S KGKEK   S +  +         L+E+P
Sbjct: 176  SDLGLLEEGDKQKMLFFQFPGNLPRIKQPVSKKGKEKAEHSVSSDRFGALKKGCRLEELP 235

Query: 504  GGYMGKMLVYKSGAVKLKLGETFFDVSPGSNCSFVQDVVAIDKAQKNFCVLGPISKKAVV 325
             GY+GKMLVYKSGAVKLK+GET FD S G +C F QDV A + A K  CV+G + ++ VV
Sbjct: 236  EGYVGKMLVYKSGAVKLKIGETLFDASTGEDCVFAQDVAAFNTASKQCCVIGEVGQRVVV 295

Query: 324  TPD 316
            TPD
Sbjct: 296  TPD 298